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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:1014338..1015559- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_49603-T1 ID=ASPNIDRAFT_49603-T1|Name=ASPNIDRAFT_49603-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1222bp|location=Sequence derived from alignment at ACJE01000006.1:1014338..1015559- (Aspergillus niger ATCC 1015)
ATGGCACCTCGCAGAAAACATAAGAAATCCCGTCTTGGCTGCCTTGAGTG
CAAGCGCCGTCGTATCAAGGTAAAACTGGCCCTCTGTGGAACTTGAGCGA
CATTGACGTGTAGAAAAGTGCGATGAACGACGACCAGTATGTTCGCAGTG
TACAATATCAGAGCGGACCTGTGAGTTTGCAGAGCTGCCGGCCCGTTGCA
TCAGACCCGCCAGATCCCGAAGGCAGACCCCTTCCATGCCAGCATCTTTG
ACAGGGGAGACAACAGATTCGACTTCAACGGTCGCTGAATCCGACCCCCC
TATAGAGCCGGCGGCCAACATGCTTCATGCAGAACTCCTATACCAATTGT
TAACGGAAACAATCGACTCCCTCAATGAGCAGAATAGCCCAGAGATAGTA
GTGTCGCCTGCAGAACTTATCAGGTGCTCTCTGAGGGCTTCATATCTTCT
AAACGAGCTATTGGCTCTCGCTGCCACGCATCTCAGTATCATTCGCTCTG
AACAACACGTCTATTACCGTACACACGCGACCCATCTGCAAAATCATGCT
TTGAGATTCTTTCATGCAATGGATAATGCAGATGATCCTGAAGCATGTGT
ATCTCGGTTTTTCTTTTCCTCTATCCTCGGGTTGCACACACTATGTGAGA
CTCTCATCTTCCGCGATGGTGACTTCAATATCTTCCTCGATTCCTTTGTT
CCTTATCTCCGCCTACATCAGGGTGTGCGTGCCGTCATCGGAGACAACTG
GAGCATGCTATCGCAGACTACTAGTCTCGGGCCGACTTTAGGCTCTGCAG
GAAGACAATTACAGACTGACGGGAGCTTGGGCCCAGAATGTAGCCATCTA
CTGGCACTCATCCGGCAGTCCAACTTAGGTCCCTCCATCACTGAAACGTA
TCGACAAGCGATCGAAGCATTGCAGGCGGCAATGCACTCAATATCTCCTA
ATCGCCCCGGAGGCGCCTGCATTACTGGGGTTTTCGCATGGCCCGCTAGT
GTACCCTCGGAATATATTGATCTTCTGGCTCTTCGTAGCCCTGACGCTCT
TGCTGTGCTGGCACATTACGGGGTAGTTCTGCATGCTTATCGCCAATGCT
GGTTCTTGGGCGATGGCGGGCGATATCTGATCGAGTCCATTAATGATTAT
CTGGGGCCCGCTTGGTCGGAATGGCTGGCATATCCGAGGCAAGTGTTGTG
TGCAGGTTCGCATCAATATTAG back to topCoding sequence (CDS) from alignment at ACJE01000006.1:1014338..1015559- >ASPNIDRAFT_49603-T1 ID=ASPNIDRAFT_49603-T1|Name=ASPNIDRAFT_49603-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2346bp|location=Sequence derived from alignment at ACJE01000006.1:1014338..1015559- (Aspergillus niger ATCC 1015)
TGCGATGAACGACGACCAGTATGTTCGCAGTGTACAATATCAGAGCGGAC
CTGTGAGTTTGCAGAGCTGCCGGCCCGTTGCATCAGACCCGCCAGATCCC
GAAGGCAGACCCCTTCCATGCCAGCATCTTTGACAGGGGAGACAACAGAT
TCGACTTCAACGGTCGCTGAATCCGACCCCCCTATAGAGCCGGCGGCCAA
CATGCTTCATGCAGAACTCCTATACCAATTGTTAACGGAAACAATCGACT
CCCTCAATGAGCAGAATAGCCCAGAGATAGTAGTGTCGCCTGCAGAACTT
ATCAGGTGCTCTCTGAGGGCTTCATATCTTCTAAACGAGCTATTGGCTCT
CGCTGCCACGCATCTCAGTATCATTCGCTCTGAACAACACGTCTATTACC
GTACACACGCGACCCATCTGCAAAATCATGCTTTGAGATTCTTTCATGCA
ATGGATAATGCAGATGATCCTGAAGCATGTGTATCTCGGTTTTTCTTTTC
CTCTATCCTCGGGTTGCACACACTATGTGAGACTCTCATCTTCCGCGATG
GTGACTTCAATATCTTCCTCGATTCCTTTGTTCCTTATCTCCGCCTACAT
CAGGGTGTGCGTGCCGTCATCGGAGACAACTGGAGCATGCTATCGCAGAC
TACTAGTCTCGGGCCGACTTTAGGCTCTGCAGGAAGACAATTACAGACTG
ACGGGAGCTTGGGCCCAGAATGTAGCCATCTACTGGCACTCATCCGGCAG
TCCAACTTAGGTCCCTCCATCACTGAAACGTATCGACAAGCGATCGAAGC
ATTGCAGGCGGCAATGCACTCAATATCTCCTAATCGCCCCGGAGGCGCCT
GCATTACTGGGGTTTTCGCATGGCCCGCTAGTGTACCCTCGGAATATATT
GATCTTCTGGCTCTTCGTAGCCCTGACGCTCTTGCTGTGCTGGCACATTA
CGGGGTAGTTCTGCATGCTTATCGCCAATGCTGGTTCTTGGGCGATGGCG
GGCGATATCTGATCGAGTCCATTAATGATTATCTGGGGCCCGCTTGGTCG
GAATGGCTGGCATATCCGAGGCAAGTGTTGTGTGCAGGTTCGCATCAATA
TTAGATGGCACCTCGCAGAAAACATAAGAAATCCCGTCTTGGCTGCCTTG
AGTGCAAGCGCCGTCGTATCAAGTGCGATGAACGACGACCAGTATGTTCG
CAGTGTACAATATCAGAGCGGACCTGTGAGTTTGCAGAGCTGCCGGCCCG
TTGCATCAGACCCGCCAGATCCCGAAGGCAGACCCCTTCCATGCCAGCAT
CTTTGACAGGGGAGACAACAGATTCGACTTCAACGGTCGCTGAATCCGAC
CCCCCTATAGAGCCGGCGGCCAACATGCTTCATGCAGAACTCCTATACCA
ATTGTTAACGGAAACAATCGACTCCCTCAATGAGCAGAATAGCCCAGAGA
TAGTAGTGTCGCCTGCAGAACTTATCAGGTGCTCTCTGAGGGCTTCATAT
CTTCTAAACGAGCTATTGGCTCTCGCTGCCACGCATCTCAGTATCATTCG
CTCTGAACAACACGTCTATTACCGTACACACGCGACCCATCTGCAAAATC
ATGCTTTGAGATTCTTTCATGCAATGGATAATGCAGATGATCCTGAAGCA
TGTGTATCTCGGTTTTTCTTTTCCTCTATCCTCGGGTTGCACACACTATG
TGAGACTCTCATCTTCCGCGATGGTGACTTCAATATCTTCCTCGATTCCT
TTGTTCCTTATCTCCGCCTACATCAGGGTGTGCGTGCCGTCATCGGAGAC
AACTGGAGCATGCTATCGCAGACTACTAGTCTCGGGCCGACTTTAGGCTC
TGCAGGAAGACAATTACAGACTGACGGGAGCTTGGGCCCAGAATGTAGCC
ATCTACTGGCACTCATCCGGCAGTCCAACTTAGGTCCCTCCATCACTGAA
ACGTATCGACAAGCGATCGAAGCATTGCAGGCGGCAATGCACTCAATATC
TCCTAATCGCCCCGGAGGCGCCTGCATTACTGGGGTTTTCGCATGGCCCG
CTAGTGTACCCTCGGAATATATTGATCTTCTGGCTCTTCGTAGCCCTGAC
GCTCTTGCTGTGCTGGCACATTACGGGGTAGTTCTGCATGCTTATCGCCA
ATGCTGGTTCTTGGGCGATGGCGGGCGATATCTGATCGAGTCCATTAATG
ATTATCTGGGGCCCGCTTGGTCGGAATGGCTGGCATATCCGAGGCAAGTG
TTGTGTGCAGGTTCGCATCAATATTAGATGGCACCTCGCAGAAAACATAA
GAAATCCCGTCTTGGCTGCCTTGAGTGCAAGCGCCGTCGTATCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:1014338..1015559 - |
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