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ASPNIDRAFT_49708-T1, ASPNIDRAFT_49708-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_49708-T1
Unique NameASPNIDRAFT_49708-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:368192..368803+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_49708-T1 ID=ASPNIDRAFT_49708-T1|Name=ASPNIDRAFT_49708-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=612bp|location=Sequence derived from alignment at ACJE01000006.1:368192..368803+ (Aspergillus niger ATCC 1015)
ATGATTCAATTAAAGGTGTGTGTGCGATTCTACTGGTGTTCATGATGCGG
GGGAAAGGAATTTTTATCGGACTGACAAGCCCCGATCCAGACAATGCTTA
ACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAATGTCCTG
AAGAAGAAGCGCCCCGCCACCGTTGGTACGATAACCCGCTCTTTTCCATT
CACTATTCAAAGGAATAACACTGATGTTGGGGTTCCGGGATGAACAGGTG
ACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGC
AGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCA
TGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGA
TCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGAC
CCCATCGGAACAAGAATGAACGGTCAGTCTAGGCGTACAGACTACGGCAT
CACATGGAAAGGATTGGAACGTCTTTACTGACATATACTAGGTGTCGTGG
CTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCG
ATGCATGTGTAG
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Coding sequence (CDS) from alignment at ACJE01000006.1:368192..368803+

>ASPNIDRAFT_49708-T1 ID=ASPNIDRAFT_49708-T1|Name=ASPNIDRAFT_49708-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1584bp|location=Sequence derived from alignment at ACJE01000006.1:368192..368803+ (Aspergillus niger ATCC 1015)
ATGATTCAATTAAAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGC
CGTTGTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTG
GTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGAC
AGCAGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCG
CCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTT
CGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGA
GACCCCATCGGAACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGG
ACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGATGA
TTCAATTAAAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTT
GTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGA
CCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCA
GCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCAT
GCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGAT
CGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACC
CCATCGGAACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGA
CAGTGGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGATGATTCA
ATTAAAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCG
AGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGACCGC
ATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAA
CAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCATGCCG
TCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGATCGTC
AAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCAT
CGGAACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGACAGT
GGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGATGATTCAATTA
AAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTG
CGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGACCGCATCG
TGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAACAAC
GTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCATGCCGTCGT
CGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGATCGTCAAGT
TCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCATCGGA
ACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTC
GAAGATCCTGTCGTTGGCGCCGATGCATGTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49708ASPNIDRAFT_49708Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49708-T1.exon1ASPNIDRAFT_49708-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49708-T1.exon2ASPNIDRAFT_49708-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49708-T1.exon3ASPNIDRAFT_49708-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49708-T1.exon4ASPNIDRAFT_49708-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49708-T1.cdsASPNIDRAFT_49708-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49708-T1ASPNIDRAFT_49708-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265HP0
DBxrefInterPro:IPR019972
DBxrefInterPro:IPR036853
DBxrefInterPro:IPR005745
DBxrefInterPro:IPR000218
DBxrefPFAM:PF00238
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:368192..368803 +
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