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ASPNIDRAFT_49896-T1, ASPNIDRAFT_49896-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_49896-T1
Unique NameASPNIDRAFT_49896-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1036057..1037263+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_49896-T1 ID=ASPNIDRAFT_49896-T1|Name=ASPNIDRAFT_49896-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1207bp|location=Sequence derived from alignment at ACJE01000020.1:1036057..1037263+ (Aspergillus niger ATCC 1015)
ATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGGCT
CTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAGTA
CTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTATGC
AAGAGATTTCAAGGCTACGAAGCAGAGTACATATCCACCAACCCTGTTGG
GCAAGCCATGCAGCTAACCTCGAGTGACCAGTGACATTGAGCACATATGG
CAAATGGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTC
CGCCATTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGAC
TTGGTGTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTG
TCCGTCTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGC
CGGGAAAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCA
CTGAGGACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTT
GAACGACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTT
CCACGGCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGG
AGCCGCACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCC
GAAGCGATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGG
CGAGCGTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGA
GCGTCGACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAG
CTACGACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCC
GCATTGCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACT
TGGCGACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTAT
AATACGGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAG
TGTGTTCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGAT
TGGGGATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCT
GAACCTTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGA
GTGGTAG
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Coding sequence (CDS) from alignment at ACJE01000020.1:1036057..1037263+

>ASPNIDRAFT_49896-T1 ID=ASPNIDRAFT_49896-T1|Name=ASPNIDRAFT_49896-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2304bp|location=Sequence derived from alignment at ACJE01000020.1:1036057..1037263+ (Aspergillus niger ATCC 1015)
ATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGGCT
CTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAGTA
CTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTATGC
AAGAGATTTCAAGGCTACGAAGCAGATGACATTGAGCACATATGGCAAAT
GGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTCCGCCA
TTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGACTTGGT
GTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTGTCCGT
CTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGCCGGGA
AAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCACTGAG
GACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTTGAACG
ACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTTCCACG
GCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGGAGCCG
CACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCCGAAGC
GATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGGCGAGC
GTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGAGCGTC
GACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAGCTACG
ACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCCGCATT
GCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACTTGGCG
ACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTATAATAC
GGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAGTGTGT
TCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGATTGGGG
ATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCTGAACC
TTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGAGTGGT
AGATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGG
CTCTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAG
TACTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTAT
GCAAGAGATTTCAAGGCTACGAAGCAGATGACATTGAGCACATATGGCAA
ATGGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTCCGC
CATTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGACTTG
GTGTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTGTCC
GTCTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGCCGG
GAAAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCACTG
AGGACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTTGAA
CGACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTTCCA
CGGCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGGAGC
CGCACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCCGAA
GCGATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGGCGA
GCGTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGAGCG
TCGACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAGCTA
CGACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCCGCA
TTGCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACTTGG
CGACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTATAAT
ACGGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAGTGT
GTTCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGATTGG
GGATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCTGAA
CCTTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGAGTG
GTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008869galactonate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0009063cellular amino acid catabolic process
GO:0034194D-galactonate catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49896ASPNIDRAFT_49896Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49896-T1.exon1ASPNIDRAFT_49896-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49896-T1.exon2ASPNIDRAFT_49896-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49896-T1.cdsASPNIDRAFT_49896-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49896-T1ASPNIDRAFT_49896-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018110
DBxrefInterPro:IPR023592
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1036057..1037263 +
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