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ASPNIDRAFT_50281-T1, ASPNIDRAFT_50281-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_50281-T1
Unique NameASPNIDRAFT_50281-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:1081481..1082343+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_50281-T1 ID=ASPNIDRAFT_50281-T1|Name=ASPNIDRAFT_50281-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=863bp|location=Sequence derived from alignment at ACJE01000005.1:1081481..1082343+ (Aspergillus niger ATCC 1015)
ATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCG
ATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGC
TGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAA
CGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTC
GTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGG
ACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCA
GACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACG
AGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAG
GTCCCAAGAAGAAGCCCCGACTGTATGTTCCTCCATCCCGACCAATTGAC
CATGGGTGCATTTGCTAACTGCTTCTAGTGATGACGGCACCGTCGACACT
GCCAAGTTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTGC
AATCAATGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGTC
GCTGGGAGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATGG
ATGCTGCCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACGA
CGAGGGTCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCCA
ACCAGAGTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGAA
CTCACTCCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCGC
CATGACTGCTTGA
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Coding sequence (CDS) from alignment at ACJE01000005.1:1081481..1082343+

>ASPNIDRAFT_50281-T1 ID=ASPNIDRAFT_50281-T1|Name=ASPNIDRAFT_50281-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1614bp|location=Sequence derived from alignment at ACJE01000005.1:1081481..1082343+ (Aspergillus niger ATCC 1015)
ATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCG
ATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGC
TGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAA
CGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTC
GTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGG
ACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCA
GACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACG
AGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAG
GTCCCAAGAAGAAGCCCCGACTTGATGACGGCACCGTCGACACTGCCAAG
TTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTGCAATCAA
TGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGTCGCTGGG
AGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATGGATGCTG
CCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACGACGAGGG
TCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCCAACCAGA
GTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGAACTCACT
CCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCGCCATGAC
TGCTTGAATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCT
CCAGCCGATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACC
GATCTGCTGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAA
GAGCAAACGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGG
AGCCTTCGTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCG
TCCGTGGACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTC
GGCTGCAGACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCA
CCAAACGAGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGC
AAGCCAGGTCCCAAGAAGAAGCCCCGACTTGATGACGGCACCGTCGACAC
TGCCAAGTTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTG
CAATCAATGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGT
CGCTGGGAGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATG
GATGCTGCCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACG
ACGAGGGTCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCC
AACCAGAGTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGA
ACTCACTCCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCG
CCATGACTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50281ASPNIDRAFT_50281Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50281-T1.exon1ASPNIDRAFT_50281-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50281-T1.exon2ASPNIDRAFT_50281-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50281-T1.cdsASPNIDRAFT_50281-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50281-T1ASPNIDRAFT_50281-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013175
DBxrefPFAM:PF08193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:1081481..1082343 +
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