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ASPNIDRAFT_50560-T1, ASPNIDRAFT_50560-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_50560-T1
Unique NameASPNIDRAFT_50560-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:486444..488027+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_50560-T1 ID=ASPNIDRAFT_50560-T1|Name=ASPNIDRAFT_50560-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1584bp|location=Sequence derived from alignment at ACJE01000016.1:486444..488027+ (Aspergillus niger ATCC 1015)
ATGAGCTCTCATGTCGTGGTTCTTGATGCAACAGCCCGACGAGCTACTAT
CAAGACGACACCTGGGAAACATCTAACTGATGTTTTACACGAAGCGTGTA
CAAAGCTAGGTGTGGATGCCAGCCAATATGGACTAAAGTAAGGTTCGACT
ATGCCCATCCTACGAAGTTCACAAGACTGACGGCTTTTGTCAAGATACAA
AGGTAAAGAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGCTCACCT
CCGGCGCAAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTC
ACCGTCGCTCTACAACTGCCCGAATCTGAAGCACGAGGGGCGCCCCCAAA
CAGACGACTTTTGGATAAATTCCCCAGCACGACAACGATATGGCTAGTAT
TGCGCAAATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGGAATATA
ACTGGAAGGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACTGTACTA
CGAAACTCCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGTTCACTG
ATCTGCAGAAATCTTTGGCACAGCTGGGATTCAACAACGGAAATGTGCTG
CTGAGGCTGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGACTATGGT
CAAGATTCAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCAAGGCCG
AAGAACCGCCTGCACCTACAGAGCAACCACCACAGGCCGATGCATCCAAC
AAACAAGAGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGCACCTTC
TACCGCGGAACAAACCCCGCCAACTGCTCCTACATCCAATGGGCCTGCTG
CAGAGCCCACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACCGTATTC
TCTCCCCCTTCCAACACTACACCACAGTCCGCACAAACGAACTACAACGA
GACCGACTACATCCCATCCATCGAACACGCACAAGCACATCAGCGACGAC
TTAATGCAACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAAATCGCC
GCCAAAGCAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACACAAGTAGA
CGTCAAGGTGCGCCTACCAGACCAAAGCCAAGTCGTGGCCAAGTTCGGAC
AAGAAGACACGGCCAAATCACTCTACGACTTTGTCCGAAACTGTCTTGCC
GCGCCATTCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCCCAAGAC
ATCTAGCGGAGGACAACCGGGGAGACATATCCAAAACGTCGTTCCCGACT
CAGACCAACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGTGTGCTA
GTCAACTTCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCAAAGCCG
GGAACTCTTGAAACCCGAACTACGGACACGCGCGCAGGAACTCAAGGTTG
AACAGCCCAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCGAAGCCG
ACAAGCACCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGGCGGCAT
GCCCAAATGGTTGAAACTACCAGGCAAGAAATGA
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Coding sequence (CDS) from alignment at ACJE01000016.1:486444..488027+

>ASPNIDRAFT_50560-T1 ID=ASPNIDRAFT_50560-T1|Name=ASPNIDRAFT_50560-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3054bp|location=Sequence derived from alignment at ACJE01000016.1:486444..488027+ (Aspergillus niger ATCC 1015)
ATGAGCTCTCATGTCGTGGTTCTTGATGCAACAGCCCGACGAGCTACTAT
CAAGACGACACCTGGGAAACATCTAACTGATGTTTTACACGAAGCGTGTA
CAAAGCTAGGTGTGGATGCCAGCCAATATGGACTAAAATACAAAGGTAAA
GAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGCTCACCTCCGGCGC
AAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTCACCGTCG
CTCTACAACTGCCCGAATCTGAAGCACGAGGGGCGCCCCCAAACAGACGA
CTTTTGGATAAATTCCCCAGCACGACAACGATATGGCTAGTATTGCGCAA
ATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGGAATATAACTGGAA
GGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACTGTACTACGAAACT
CCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGTTCACTGATCTGCA
GAAATCTTTGGCACAGCTGGGATTCAACAACGGAAATGTGCTGCTGAGGC
TGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGACTATGGTCAAGATT
CAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCAAGGCCGAAGAACC
GCCTGCACCTACAGAGCAACCACCACAGGCCGATGCATCCAACAAACAAG
AGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGCACCTTCTACCGCG
GAACAAACCCCGCCAACTGCTCCTACATCCAATGGGCCTGCTGCAGAGCC
CACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACCGTATTCTCTCCCC
CTTCCAACACTACACCACAGTCCGCACAAACGAACTACAACGAGACCGAC
TACATCCCATCCATCGAACACGCACAAGCACATCAGCGACGACTTAATGC
AACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAAATCGCCGCCAAAG
CAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACACAAGTAGACGTCAAG
GTGCGCCTACCAGACCAAAGCCAAGTCGTGGCCAAGTTCGGACAAGAAGA
CACGGCCAAATCACTCTACGACTTTGTCCGAAACTGTCTTGCCGCGCCAT
TCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCCCAAGACATCTAGC
GGAGGACAACCGGGGAGACATATCCAAAACGTCGTTCCCGACTCAGACCA
ACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGTGTGCTAGTCAACT
TCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCAAAGCCGGGAACTC
TTGAAACCCGAACTACGGACACGCGCGCAGGAACTCAAGGTTGAACAGCC
CAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCGAAGCCGACAAGCA
CCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGGCGGCATGCCCAAA
TGGTTGAAACTACCAGGCAAGAAATGAATGAGCTCTCATGTCGTGGTTCT
TGATGCAACAGCCCGACGAGCTACTATCAAGACGACACCTGGGAAACATC
TAACTGATGTTTTACACGAAGCGTGTACAAAGCTAGGTGTGGATGCCAGC
CAATATGGACTAAAATACAAAGGTAAAGAGCTCGATCTTTCACTGGTATT
TCGCCTCTCTGGGCTCACCTCCGGCGCAAAGCTGGAGTTGGTTCAGCTCT
CCCGTTCGCCCTCCGTCGTCACCGTCGCTCTACAACTGCCCGAATCTGAA
GCACGAGGGGCGCCCCCAAACAGACGACTTTTGGATAAATTCCCCAGCAC
GACAACGATATGGCTAGTATTGCGCAAATTCGAGGCTGGAGTTGCTGGAG
GTGCTCCGACCCGGAATATAACTGGAAGGGGTGTCCCTAGTGGCAATGAA
GGCGCAGGGAGACTGTACTACGAAACTCCGGTCGTCCAGATTATGGAACG
GGAACTCTCCTCGTTCACTGATCTGCAGAAATCTTTGGCACAGCTGGGAT
TCAACAACGGAAATGTGCTGCTGAGGCTGAGCTTTCGTCGTACAGAGGAA
CCTTTGGAGGAGACTATGGTCAAGATTCAGGAGTACTTCAAACCGTTCGA
CGACGCGACCCCCAAGGCCGAAGAACCGCCTGCACCTACAGAGCAACCAC
CACAGGCCGATGCATCCAACAAACAAGAGGGGGCACAGCAACAGCCCGCA
TCTACTTCCGAGGCACCTTCTACCGCGGAACAAACCCCGCCAACTGCTCC
TACATCCAATGGGCCTGCTGCAGAGCCCACCGAAGTACCAGCTGGGTTCT
CTCGACCCATAACCGTATTCTCTCCCCCTTCCAACACTACACCACAGTCC
GCACAAACGAACTACAACGAGACCGACTACATCCCATCCATCGAACACGC
ACAAGCACATCAGCGACGACTTAATGCAACCTCCCGACCCCAACGCCTTC
CCACGGACGCCGAAATCGCCGCCAAAGCAGCCGCAGAAGAGGAACGGCTC
GCCGCAGTCACACAAGTAGACGTCAAGGTGCGCCTACCAGACCAAAGCCA
AGTCGTGGCCAAGTTCGGACAAGAAGACACGGCCAAATCACTCTACGACT
TTGTCCGAAACTGTCTTGCCGCGCCATTCGCCAGCGAGAAATTTATCATC
ACGTCCTCCCTCCCCAAGACATCTAGCGGAGGACAACCGGGGAGACATAT
CCAAAACGTCGTTCCCGACTCAGACCAACAGCTGCTGATCAAGGATCTAG
CCATGATCGGTCGTGTGCTAGTCAACTTCACTTGGGATGCGAACGCATCC
CCTGCCGCCCGGCAAAGCCGGGAACTCTTGAAACCCGAACTACGGACACG
CGCGCAGGAACTCAAGGTTGAACAGCCCAAGGACGTAACAGATAACTCGG
AAGTGAGCAGGCCGAAGCCGACAAGCACCGGGGATGAAACTCGCGGCGAG
AAGCGGAAGCCAGGCGGCATGCCCAAATGGTTGAAACTACCAGGCAAGAA
ATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50560ASPNIDRAFT_50560Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50560-T1.exon1ASPNIDRAFT_50560-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50560-T1.exon2ASPNIDRAFT_50560-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50560-T1.cdsASPNIDRAFT_50560-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50560-T1ASPNIDRAFT_50560-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR021569
DBxrefInterPro:IPR001012
DBxrefPFAM:PF00789
DBxrefPFAM:PF11470
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:486444..488027 +
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