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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000003.1:258275..259360+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_50851-T1 ID=ASPNIDRAFT_50851-T1|Name=ASPNIDRAFT_50851-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1086bp|location=Sequence derived from alignment at ACJE01000003.1:258275..259360+ (Aspergillus niger ATCC 1015)
ATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTGGGATCGAATCCAGCTT
GAATCTTAGTGTCGAAAGACATGTGGATTACATCAAGAACTTGGACAGCG
TGCGTCAATTCTTACTATAACCATGGTTCTTCTCTTGATGATGGGGACGA
TGGTTGACAGGTGATGCTAGAGGAGGGATGAGCTAGAATATTGGCTTACA
GAACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGACGGCTCTACATCT
CCTTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACCATCGATTTTGTTC
TCTCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGGGCCATGAT
GCACACATGCTGTACACAGTATCGGCAGTGCAAATTCTCGTAACCCTAGA
CGCGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGAGAAGGTTG
GCTCTTTCATCGCAGGGCTACAGGACAAAGACACTGGCGCTTTCATGGGC
GATGAATGGGGTGAGAGAGATACACGCTTTCTGTATGGCGCGTTTAATGC
ACTCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTGCCCAAAGCCATTT
CCTATGTCCAACAGTGTGAGAACTTGGACGGCGGCTATGGCATCCAGCCT
GGAGCTGAGTCACATGCTGGTCAAATTTTCACTTGCGTAGGAGCTCTGGC
AATCGCCGGACGACTGGACTTGGTAAACAAGGACCGTCTTGGAGGTTGGC
TCAGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGGAAGGCCCGAGAAA
CTGCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTAGCTATGAT
CGACAAACTCCACTGGATTGATAGTGGCAAGCTTTCTGCTTTCATCTTGC
GCTGTCAGGTATGTTATCCCTTCGCCATGGCCTTGCATGCATGGCACTGA
CGCAATCCAGGATTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCAGCA
TGGTTGATGTGTTTCATACGCATTTTGCCATTGCCGGTTTGAGCCTGTTG
AAGTTCAATGGCATCCAAGAAGTAGATCCTGTTTAG back to topCoding sequence (CDS) from alignment at ACJE01000003.1:258275..259360+ >ASPNIDRAFT_50851-T1 ID=ASPNIDRAFT_50851-T1|Name=ASPNIDRAFT_50851-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2889bp|location=Sequence derived from alignment at ACJE01000003.1:258275..259360+ (Aspergillus niger ATCC 1015)
ATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTGGGATCGAATCCAGCTT
GAATCTTAGTGTCGAAAGACATGTGGATTACATCAAGAACTTGGACAGCA
GGAGGGATGAGCTAGAATATTGGCTTACAGAACACCTTCGCCTGAATGGG
GTGTATTGGGGCTTGACGGCTCTACATCTCCTTGGCCGTCCCGATGTCCT
TCCTCGTGAAGATACCATCGATTTTGTTCTCTCGTGTCAACGGGAGAATG
GCGGCTTCGGGGCAGCTCCGGGCCATGATGCACACATGCTGTACACAGTA
TCGGCAGTGCAAATTCTCGTAACCCTAGACGCGGTGGATGAGCTGGAGAA
GCGCGGTCTAGGAGGAAAAGAGAAGGTTGGCTCTTTCATCGCAGGGCTAC
AGGACAAAGACACTGGCGCTTTCATGGGCGATGAATGGGGTGAGAGAGAT
ACACGCTTTCTGTATGGCGCGTTTAATGCACTCTCCCTTCTTGGGCTTCT
TCACACAGTTGATGTGCCCAAAGCCATTTCCTATGTCCAACAGTGTGAGA
ACTTGGACGGCGGCTATGGCATCCAGCCTGGAGCTGAGTCACATGCTGGT
CAAATTTTCACTTGCGTAGGAGCTCTGGCAATCGCCGGACGACTGGACTT
GGTAAACAAGGACCGTCTTGGAGGTTGGCTCAGCGAAAGACAGGTCGAAA
ATGGTGGTCTGAATGGAAGGCCCGAGAAACTGCCCGATGCATGCTATAGC
TGGTGGGTTGGTGCTAGCTTAGCTATGATCGACAAACTCCACTGGATTGA
TAGTGGCAAGCTTTCTGCTTTCATCTTGCGCTGTCAGGATTCGGAGGCTG
GGGGTATCGGAGACAGACCAGGCAGCATGGTTGATGTGTTTCATACGCAT
TTTGCCATTGCCGGTTTGAGCCTGTTGAAGTTCAATGGCATCCAAGAAGT
AGATCCTGTTTAGATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTGGGA
TCGAATCCAGCTTGAATCTTAGTGTCGAAAGACATGTGGATTACATCAAG
AACTTGGACAGCAGGAGGGATGAGCTAGAATATTGGCTTACAGAACACCT
TCGCCTGAATGGGGTGTATTGGGGCTTGACGGCTCTACATCTCCTTGGCC
GTCCCGATGTCCTTCCTCGTGAAGATACCATCGATTTTGTTCTCTCGTGT
CAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGGGCCATGATGCACACAT
GCTGTACACAGTATCGGCAGTGCAAATTCTCGTAACCCTAGACGCGGTGG
ATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGAGAAGGTTGGCTCTTTC
ATCGCAGGGCTACAGGACAAAGACACTGGCGCTTTCATGGGCGATGAATG
GGGTGAGAGAGATACACGCTTTCTGTATGGCGCGTTTAATGCACTCTCCC
TTCTTGGGCTTCTTCACACAGTTGATGTGCCCAAAGCCATTTCCTATGTC
CAACAGTGTGAGAACTTGGACGGCGGCTATGGCATCCAGCCTGGAGCTGA
GTCACATGCTGGTCAAATTTTCACTTGCGTAGGAGCTCTGGCAATCGCCG
GACGACTGGACTTGGTAAACAAGGACCGTCTTGGAGGTTGGCTCAGCGAA
AGACAGGTCGAAAATGGTGGTCTGAATGGAAGGCCCGAGAAACTGCCCGA
TGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTAGCTATGATCGACAAAC
TCCACTGGATTGATAGTGGCAAGCTTTCTGCTTTCATCTTGCGCTGTCAG
GATTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCAGCATGGTTGATGT
GTTTCATACGCATTTTGCCATTGCCGGTTTGAGCCTGTTGAAGTTCAATG
GCATCCAAGAAGTAGATCCTGTTTAGATGTCCTTAGTTTCGGGTCCTGGT
AGGGCTGCTGGGATCGAATCCAGCTTGAATCTTAGTGTCGAAAGACATGT
GGATTACATCAAGAACTTGGACAGCAGGAGGGATGAGCTAGAATATTGGC
TTACAGAACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGACGGCTCTA
CATCTCCTTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACCATCGATTT
TGTTCTCTCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGGGCC
ATGATGCACACATGCTGTACACAGTATCGGCAGTGCAAATTCTCGTAACC
CTAGACGCGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGAGAA
GGTTGGCTCTTTCATCGCAGGGCTACAGGACAAAGACACTGGCGCTTTCA
TGGGCGATGAATGGGGTGAGAGAGATACACGCTTTCTGTATGGCGCGTTT
AATGCACTCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTGCCCAAAGC
CATTTCCTATGTCCAACAGTGTGAGAACTTGGACGGCGGCTATGGCATCC
AGCCTGGAGCTGAGTCACATGCTGGTCAAATTTTCACTTGCGTAGGAGCT
CTGGCAATCGCCGGACGACTGGACTTGGTAAACAAGGACCGTCTTGGAGG
TTGGCTCAGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGGAAGGCCCG
AGAAACTGCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTAGCT
ATGATCGACAAACTCCACTGGATTGATAGTGGCAAGCTTTCTGCTTTCAT
CTTGCGCTGTCAGGATTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCA
GCATGGTTGATGTGTTTCATACGCATTTTGCCATTGCCGGTTTGAGCCTG
TTGAAGTTCAATGGCATCCAAGAAGTAGATCCTGTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018344 | protein geranylgeranylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004663 | Rab geranylgeranyltransferase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263G3M |
| DBxref | InterPro:IPR008930 |
| DBxref | InterPro:IPR026873 |
| DBxref | InterPro:IPR001330 |
| DBxref | PFAM:PF00432 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000003.1 | supercontig | ACJE01000003.1:258275..259360 + |
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