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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:3095115..3098531+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_51606-T1 ID=ASPNIDRAFT_51606-T1|Name=ASPNIDRAFT_51606-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=3417bp|location=Sequence derived from alignment at ACJE01000010.1:3095115..3098531+ (Aspergillus niger ATCC 1015)
TTTGCATATTATCGCCTTACCTTCTCTCCGTAGCGGAGAAAGACAGTACT
TCTCTCCATGTGGGGACTCTAGGGAAATACTAAATATAAATTCTGCCCAC
AGTCTTGGAGGTTCCTGCCATCCTTTTTTATTATTTTTTTACACCCTCTA
TTCGCGTCCCGGAAATCCTTGCGGGCGGCGCTTCCTCGAGTTTCAGCTCG
CGCCGCCATCTCATCCGGACGAACCATTCCCCCAGAAGCTCTGCTTGACC
TGTTCGCCTGCGTGTTTCATCGACGCTCTTTTCTGTGGGATTCGTTCATC
CGCTGTCCCTCATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGAT
GATCGCAACCGCTCAGTGTAAGTGCTAAAGCTGGTGGATCTCTTCACCTC
TCCCCATTAAACCCTAGTTCGTCAAGCTAACGCTCTGGTGCGCGACTAGG
ACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGGCACATGAGCTTGC
GGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTTGGTCACAACAAGA
AGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGCCCTCACTCGATAT
CAATACGTGCGTTGTCCACCTAACCCGCTCGTCTGGAAAGACTGTCGTTG
ATCTGACATTGCCGCTTTCCTATGCTTTTAGTTTGGTCCCCCACATGAAC
ACAAAGGCCCTGAAGACTTTAACGGCAAACGCGACGATGATGATGACGAA
GATGAGACGACGCCTGCCCCCGAAGATGTGCATCCTACGCCTCCAAATCC
TCCCATGATTCCCGCCCACCTGCCAGGTCATCCCGGCTTCCAGCACGTCA
CTCATGCGCCGTCTGCTTCCCCGCCCATAGGGAATGGGATGGCATTTGCT
CCGCGTCACGGTACCCCTCAACCGCAGGGAGTTTCTCGGCCTTCGTCTCG
GAATCATCTTCGTCGGGTGAGCTCCAATATGGGACCTCAACAGCATCACC
ATGCGACCCCTCCGCCGCCTCCGCCGCCGCCGCAAAATGGCTTCACGTAC
ATTCCTAATCCTTCGGTATATAACCCCAACGCTGCTCACGCCATGGCTCA
ACCTCCCCGCCCACCTCAGTTCACTCATTACGGACCCCCCGGGCCGCATC
ACCAACCCCCTCCGCCTCCACAGCATCATCCAGCGATGCCGCCACACTCC
ATGCCCCCACAGTCTATGCCTCCACATACAATGGCACCGCAAGCCATGCC
GCCGCACCACCAGGCTCCTCCACACATGCCACACCCGCCTCATGCACTTT
CACAGCAACCGCCTCCAATGGCCATGACCCAGCCGCCCCATGCCGCCATC
CCGCAGGTCGCGCAAGCGTTTCTCCCAGAGCAAGGACGAAATTCCATGCC
TCCGACGTTTACAACAGAACAGCAACCACCGCCGCCACGAACAGTGTCGC
TTCCTGAAGGAACCGCTCCGACAGACGCAATGCCAGGTCCCATGAAGACG
GAAGGAACCCCATCCCCGCCGCACCAGCGATCTCTCTCTTCCAAGTCTCG
CAGTATCTTCACACCCATTGACGACCGAGGCTCCGTATTGGCGCGCCATT
TTGGCGTAGGTCCTCCGACGGAGGCGGGAGAGAATGCGCAAACGAAGGCT
GAAGGAGCAACACTCGGACCAAACGAAGGGAAGCCTGCTGGGCTAACTGC
AAAGCCCCCTCCTCCACCTCCCCGAGCGGCCACGGAAGCCCCGCGTCCCC
AGCCGGTAGTTGACCTGAAGCCGCCTGTGCGTACAAACAGCGGCCAGTTC
CCGCCTAAGCGCCCGCAGTTGAAGGTACAGATACCGAGTGAGAATTCGGA
CCGGGGCAGCGCAACGGCAGATTCATCGTCACGTGATTCTGCGGGGAACA
AAACGCTCACGCCTGCCAAAGCGAATCCAGACACCGGTCACTCGAGCGTG
GTATTGCCCCCGCCCTCGCCGTCTGCGGGTGCGATATTAAGTGCAGGGGC
TCAAGGGCCGCCAAATCCTTTTGCCCGGCCACCGCCTCCGGGAGCAGCAC
CACAGAACAACAGTGCATACAACAATAATAGCAATATAGATACGCCAATC
TCTGCTCTTCCTAGTCGGTTCGTCTCGGATGCGCTTCTCCCGTCACCGTC
CAGTTTCTTTCCGGAATGGGGCTTTGGGCGGTCTGGACCAGACAGCAACA
TGTTGCCCAGTCCCTTGACGTTCCCTACGCCGGCGGTACAAAGTGGCCCC
GGGTTTGGGCGCGAGGATGAGCAAGACAAAAAGCGCAAAAGCCCTGATAG
TGGACCCAATGCGGAAGGGGTAGTGAAGAAACCAAAGACGTAATCCACTC
CATATTGTTACAACTACTAGACTGATGATTGTGGTATTTTGTTGCTGGGG
TGATCAAGTCCCCCGTGTTTCATATATGGCATCTCAAGGCGTTGGCGAAA
GCTACTTTTGGTTTCCTTAATTGGGATGGGAAAGTTCGAATGAGGCTCGT
TTTGTTTCCCCTGGATCCTTTTTTTGTCCTCCGGTTCTGAACCAGTACCA
AGTCCTTCCTTGTTTTGTGATAAGGGTTTCCGATTTAACTTTATACCCCT
TCCTTTTATTGTTATTGCCATGGTCGTTTTTGGCAGTTGACCTAGCTATC
CATCGATTTCTCTCCAAAGTCCGAAACCAAATGAGAATGGTGCGATAAAT
CTTTCCTTTTCCTACCTATTTCCTTTTTCTCTTGCTGTTTTGCTTTTTTT
CGCTGGGGACTTTGAAGATGATAGAAGACACATAATATTATTATATTAAG
TGTTTCAATCTTCTAGTCAAGGGTGGCTTTCTCTTTCATATATTACTATG
TTCTTATTATTTTGGAATAAAAGTAAAAAAAAAAAAAGGTGTACATAACA
AAGATCTGCGATGTGCAACTAGGAGAATTAATTCAATAGTAGGTTTCTTA
GTTTGAATACTGTGGTTCACCGCACGTCCCGTGTTCCGGTGCTTCTATTA
TAAGAAGAGTAGATAGTAGGGATTTAAATTGATTGATAGTCCGTTGCCGT
GAACCTAAACGTTAACTCTAAATTTCAGTTTTGTCGCGCGCACGAGTCAT
GACATCAACTGACTTTCTACCTTGTTTATCTGATAGATAGAGTTGGATGA
TGGTTATGCAAGGGTGGGGTTTTGGTTCACAACACAAGTTACTGTCGTCA
TATAAGTATAATAAAACAGTAACTATCGAATGATATGATATTATAGTCAA
TTTCATTGTGGTAAACATTTGATTTATGTATGCAGATCATAGTATCATAT
GGTATGATGCTACTAAGCACGAGTGCCATTTTCTAATTACTACTAGTAAA
GTAAGTATCTCAACCAGTCTGTCTGTCAGGTAGTATTATTAGATTTTAAG
TATTTAGATACATCATC back to topCoding sequence (CDS) from alignment at ACJE01000010.1:3095115..3098531+ >ASPNIDRAFT_51606-T1 ID=ASPNIDRAFT_51606-T1|Name=ASPNIDRAFT_51606-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5625bp|location=Sequence derived from alignment at ACJE01000010.1:3095115..3098531+ (Aspergillus niger ATCC 1015)
ATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCG
CTCAGTGACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGGCACATG
AGCTTGCGGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTTGGTCAC
AACAAGAAGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGCCCTCAC
TCGATATCAATACTTTGGTCCCCCACATGAACACAAAGGCCCTGAAGACT
TTAACGGCAAACGCGACGATGATGATGACGAAGATGAGACGACGCCTGCC
CCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCATGATTCCCGCCCA
CCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATGCGCCGTCTGCTT
CCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGTCACGGTACCCCT
CAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCATCTTCGTCGGGT
GAGCTCCAATATGGGACCTCAACAGCATCACCATGCGACCCCTCCGCCGC
CTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCTAATCCTTCGGTA
TATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCCCCGCCCACCTCA
GTTCACTCATTACGGACCCCCCGGGCCGCATCACCAACCCCCTCCGCCTC
CACAGCATCATCCAGCGATGCCGCCACACTCCATGCCCCCACAGTCTATG
CCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCACCACCAGGCTCC
TCCACACATGCCACACCCGCCTCATGCACTTTCACAGCAACCGCCTCCAA
TGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAGGTCGCGCAAGCG
TTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGACGTTTACAACAGA
ACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTGAAGGAACCGCTC
CGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGAACCCCATCCCCG
CCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTATCTTCACACCCAT
TGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCGTAGGTCCTCCGA
CGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGAGCAACACTCGGA
CCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCCCCCTCCTCCACC
TCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGGTAGTTGACCTGA
AGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCTAAGCGCCCGCAG
TTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGGCAGCGCAACGGC
AGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGCTCACGCCTGCCA
AAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTGCCCCCGCCCTCG
CCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGGGCCGCCAAATCC
TTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGAACAACAGTGCAT
ACAACAATAATAGCAATATAGATACGCCAATCTCTGCTCTTCCTAGTCGG
TTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTTCTTTCCGGAATG
GGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGCCCAGTCCCTTGA
CGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTTGGGCGCGAGGAT
GAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACCCAATGCGGAAGG
GGTAGTGAAGAAACCAAAGACGTAAATGGGTCGCAGAAAGATCGAGATCA
AGGCGATCAAGGATGATCGCAACCGCTCAGTGACCTTTCTGAAACGGAAG
GGTGGTCTGTTCAAGAAGGCACATGAGCTTGCGGTCCTGTGTTCGGTTGA
TGTCGCTGTTATTATCTTTGGTCACAACAAGAAGCTCTACGAATTCTCGT
CATGTGATATGCGAGAGGCCCTCACTCGATATCAATACTTTGGTCCCCCA
CATGAACACAAAGGCCCTGAAGACTTTAACGGCAAACGCGACGATGATGA
TGACGAAGATGAGACGACGCCTGCCCCCGAAGATGTGCATCCTACGCCTC
CAAATCCTCCCATGATTCCCGCCCACCTGCCAGGTCATCCCGGCTTCCAG
CACGTCACTCATGCGCCGTCTGCTTCCCCGCCCATAGGGAATGGGATGGC
ATTTGCTCCGCGTCACGGTACCCCTCAACCGCAGGGAGTTTCTCGGCCTT
CGTCTCGGAATCATCTTCGTCGGGTGAGCTCCAATATGGGACCTCAACAG
CATCACCATGCGACCCCTCCGCCGCCTCCGCCGCCGCCGCAAAATGGCTT
CACGTACATTCCTAATCCTTCGGTATATAACCCCAACGCTGCTCACGCCA
TGGCTCAACCTCCCCGCCCACCTCAGTTCACTCATTACGGACCCCCCGGG
CCGCATCACCAACCCCCTCCGCCTCCACAGCATCATCCAGCGATGCCGCC
ACACTCCATGCCCCCACAGTCTATGCCTCCACATACAATGGCACCGCAAG
CCATGCCGCCGCACCACCAGGCTCCTCCACACATGCCACACCCGCCTCAT
GCACTTTCACAGCAACCGCCTCCAATGGCCATGACCCAGCCGCCCCATGC
CGCCATCCCGCAGGTCGCGCAAGCGTTTCTCCCAGAGCAAGGACGAAATT
CCATGCCTCCGACGTTTACAACAGAACAGCAACCACCGCCGCCACGAACA
GTGTCGCTTCCTGAAGGAACCGCTCCGACAGACGCAATGCCAGGTCCCAT
GAAGACGGAAGGAACCCCATCCCCGCCGCACCAGCGATCTCTCTCTTCCA
AGTCTCGCAGTATCTTCACACCCATTGACGACCGAGGCTCCGTATTGGCG
CGCCATTTTGGCGTAGGTCCTCCGACGGAGGCGGGAGAGAATGCGCAAAC
GAAGGCTGAAGGAGCAACACTCGGACCAAACGAAGGGAAGCCTGCTGGGC
TAACTGCAAAGCCCCCTCCTCCACCTCCCCGAGCGGCCACGGAAGCCCCG
CGTCCCCAGCCGGTAGTTGACCTGAAGCCGCCTGTGCGTACAAACAGCGG
CCAGTTCCCGCCTAAGCGCCCGCAGTTGAAGGTACAGATACCGAGTGAGA
ATTCGGACCGGGGCAGCGCAACGGCAGATTCATCGTCACGTGATTCTGCG
GGGAACAAAACGCTCACGCCTGCCAAAGCGAATCCAGACACCGGTCACTC
GAGCGTGGTATTGCCCCCGCCCTCGCCGTCTGCGGGTGCGATATTAAGTG
CAGGGGCTCAAGGGCCGCCAAATCCTTTTGCCCGGCCACCGCCTCCGGGA
GCAGCACCACAGAACAACAGTGCATACAACAATAATAGCAATATAGATAC
GCCAATCTCTGCTCTTCCTAGTCGGTTCGTCTCGGATGCGCTTCTCCCGT
CACCGTCCAGTTTCTTTCCGGAATGGGGCTTTGGGCGGTCTGGACCAGAC
AGCAACATGTTGCCCAGTCCCTTGACGTTCCCTACGCCGGCGGTACAAAG
TGGCCCCGGGTTTGGGCGCGAGGATGAGCAAGACAAAAAGCGCAAAAGCC
CTGATAGTGGACCCAATGCGGAAGGGGTAGTGAAGAAACCAAAGACGTAA
ATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCG
CTCAGTGACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGGCACATG
AGCTTGCGGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTTGGTCAC
AACAAGAAGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGCCCTCAC
TCGATATCAATACTTTGGTCCCCCACATGAACACAAAGGCCCTGAAGACT
TTAACGGCAAACGCGACGATGATGATGACGAAGATGAGACGACGCCTGCC
CCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCATGATTCCCGCCCA
CCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATGCGCCGTCTGCTT
CCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGTCACGGTACCCCT
CAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCATCTTCGTCGGGT
GAGCTCCAATATGGGACCTCAACAGCATCACCATGCGACCCCTCCGCCGC
CTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCTAATCCTTCGGTA
TATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCCCCGCCCACCTCA
GTTCACTCATTACGGACCCCCCGGGCCGCATCACCAACCCCCTCCGCCTC
CACAGCATCATCCAGCGATGCCGCCACACTCCATGCCCCCACAGTCTATG
CCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCACCACCAGGCTCC
TCCACACATGCCACACCCGCCTCATGCACTTTCACAGCAACCGCCTCCAA
TGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAGGTCGCGCAAGCG
TTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGACGTTTACAACAGA
ACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTGAAGGAACCGCTC
CGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGAACCCCATCCCCG
CCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTATCTTCACACCCAT
TGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCGTAGGTCCTCCGA
CGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGAGCAACACTCGGA
CCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCCCCCTCCTCCACC
TCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGGTAGTTGACCTGA
AGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCTAAGCGCCCGCAG
TTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGGCAGCGCAACGGC
AGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGCTCACGCCTGCCA
AAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTGCCCCCGCCCTCG
CCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGGGCCGCCAAATCC
TTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGAACAACAGTGCAT
ACAACAATAATAGCAATATAGATACGCCAATCTCTGCTCTTCCTAGTCGG
TTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTTCTTTCCGGAATG
GGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGCCCAGTCCCTTGA
CGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTTGGGCGCGAGGAT
GAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACCCAATGCGGAAGG
GGTAGTGAAGAAACCAAAGACGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO:0046983 | protein dimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033896 |
| DBxref | InterPro:IPR036879 |
| DBxref | InterPro:IPR002100 |
| DBxref | PFAM:PF00319 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:3095115..3098531 + |
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