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ASPNIDRAFT_51845-T1, ASPNIDRAFT_51845-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51845-T1
Unique NameASPNIDRAFT_51845-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2176602..2177807-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51845-T1 ID=ASPNIDRAFT_51845-T1|Name=ASPNIDRAFT_51845-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1206bp|location=Sequence derived from alignment at ACJE01000004.1:2176602..2177807- (Aspergillus niger ATCC 1015)
TGTGATCCCAAACTCATTACCATCGCCTCAACTGAACACTATCTCTCTCA
TCGACCATGGCCGCCAGAAACACACTCCGTCGCGCCCTTCTCTACAGTAC
GTCACTGCCCCCTTCTCTTCCCAACCCATAGCTCTCCCCGCATTTCCGCA
CTCATCCCACACCCCAACATGCTATCCGACTATACCAATTACCCCCTAAC
TAACCCCCAATCCCAGTCCCGGGCTCCTCCCAACGCTTCATCGATAAATC
CCGCACACTAACCGCCGACTGCGTGGCCTACGATCTCGAAGACAGCGTAA
CTCCGCACAAGAAAGCGGAAGCTCGGTCCCTGGTGCGGAGAGCACTCGAC
GAGCCCGCACCGCAGGGAATCCGCGAACGAGCCGTACGAATCAACTCCGT
GGACAGCGGCCTCGCCCTAGGCGATCTCACCGAAGTGGTGAGTACCATTA
TCATCCCTCACTTTTCTCCTCCATTCAACTCACTAAATCCGGTAATAGCT
CAAATCCCCCAATCTCACAACAATCGTGATCCCCAAAGTCAACACCCCCT
CGGACCTCACTTTCGTGAACGATGTCATCACGCACACTCTCTCCCAACAA
CAACAGGATCCTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCTCTAGT
CGAATCCGCCAAATCCCTCACAAACCTCACTCAAATCTGCGCCTCCACGC
CCCTCCTGCAGGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCGACCTC
AGCATCACCCGTACCCCGTCATTAACTGAGTTCCTCTTCGCAAGATCTAT
GATTGCTACGGCTGCTCGCGCTGCGAACCTCCCCTCTACTATTGATTTGG
TCTGTACAGCGTACAAATCTACCAAGGGGGACGGGTCCCCGCCTGCGGTG
CTGGAGGAGGAATGTCGCGATGGGAGACGGCTAGGGTTCAATGGGAAGCA
GTGTATTCATCCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGGACCGG
ATCCGGAAGAAGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATGAGAAG
GCTGCGAGAGCGGGACGGGGTGCGTGGACGCTTGATGGGAAAATGATTGA
TGTGCCGGTGGCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGAGGCGT
GTGGATTTGATGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGGAACCG
GAGTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2176602..2177807-

>ASPNIDRAFT_51845-T1 ID=ASPNIDRAFT_51845-T1|Name=ASPNIDRAFT_51845-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2907bp|location=Sequence derived from alignment at ACJE01000004.1:2176602..2177807- (Aspergillus niger ATCC 1015)
CTCAAATCCCCCAATCTCACAACAATCGTGATCCCCAAAGTCAACACCCC
CTCGGACCTCACTTTCGTGAACGATGTCATCACGCACACTCTCTCCCAAC
AACAACAGGATCCTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCTCTA
GTCGAATCCGCCAAATCCCTCACAAACCTCACTCAAATCTGCGCCTCCAC
GCCCCTCCTGCAGGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCGACC
TCAGCATCACCCGTACCCCGTCATTAACTGAGTTCCTCTTCGCAAGATCT
ATGATTGCTACGGCTGCTCGCGCTGCGAACCTCCCCTCTACTATTGATTT
GGTCTGTACAGCGTACAAATCTACCAAGGGGGACGGGTCCCCGCCTGCGG
TGCTGGAGGAGGAATGTCGCGATGGGAGACGGCTAGGGTTCAATGGGAAG
CAGTGTATTCATCCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGGACC
GGATCCGGAAGAAGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATGAGA
AGGCTGCGAGAGCGGGACGGGGTGCGTGGACGCTTGATGGGAAAATGATT
GATGTGCCGGTGGCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGAGGC
GTGTGGATTTGATGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGGAAC
CGGAGTGATCCCGGGCTCCTCCCAACGCTTCATCGATAAATCCCGCACAC
TAACCGCCGACTGCGTGGCCTACGATCTCGAAGACAGCGTAACTCCGCAC
AAGAAAGCGGAAGCTCGGTCCCTGGTGCGGAGAGCACTCGACGAGCCCGC
ACCGCAGGGAATCCGCGAACGAGCCGTACGAATCAACTCCGTGGACAGCG
GCCTCGCCCTAGGCGATCTCACCGAAGTGATGGCCGCCAGAAACACACTC
CGTCGCGCCCTTCTCTACACTCAAATCCCCCAATCTCACAACAATCGTGA
TCCCCAAAGTCAACACCCCCTCGGACCTCACTTTCGTGAACGATGTCATC
ACGCACACTCTCTCCCAACAACAACAGGATCCTTCCACCCCGAGACCTCC
AATCTCCCTCCTCGCTCTAGTCGAATCCGCCAAATCCCTCACAAACCTCA
CTCAAATCTGCGCCTCCACGCCCCTCCTGCAGGGCCTCATTTTCGCGGCC
GAAGACTTCGCACTCGACCTCAGCATCACCCGTACCCCGTCATTAACTGA
GTTCCTCTTCGCAAGATCTATGATTGCTACGGCTGCTCGCGCTGCGAACC
TCCCCTCTACTATTGATTTGGTCTGTACAGCGTACAAATCTACCAAGGGG
GACGGGTCCCCGCCTGCGGTGCTGGAGGAGGAATGTCGCGATGGGAGACG
GCTAGGGTTCAATGGGAAGCAGTGTATTCATCCGTCGCAGGTGGAGACGG
CGCAGGCGATCTTTGGACCGGATCCGGAAGAAGTTAAGTGGGCTGTGAGG
GTGTGTGTGGCGGATGAGAAGGCTGCGAGAGCGGGACGGGGTGCGTGGAC
GCTTGATGGGAAAATGATTGATGTGCCGGTGGCGGAGAAGGCCAGGGCGG
TGGTTAGGAAGGCGGAGGCGTGTGGATTTGATGTTGGGAAGTTGAGGGAG
GAGTGGGGGCATCAGGAACCGGAGTGATCCCGGGCTCCTCCCAACGCTTC
ATCGATAAATCCCGCACACTAACCGCCGACTGCGTGGCCTACGATCTCGA
AGACAGCGTAACTCCGCACAAGAAAGCGGAAGCTCGGTCCCTGGTGCGGA
GAGCACTCGACGAGCCCGCACCGCAGGGAATCCGCGAACGAGCCGTACGA
ATCAACTCCGTGGACAGCGGCCTCGCCCTAGGCGATCTCACCGAAGTGAT
GGCCGCCAGAAACACACTCCGTCGCGCCCTTCTCTACACTCAAATCCCCC
AATCTCACAACAATCGTGATCCCCAAAGTCAACACCCCCTCGGACCTCAC
TTTCGTGAACGATGTCATCACGCACACTCTCTCCCAACAACAACAGGATC
CTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCTCTAGTCGAATCCGCC
AAATCCCTCACAAACCTCACTCAAATCTGCGCCTCCACGCCCCTCCTGCA
GGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCGACCTCAGCATCACCC
GTACCCCGTCATTAACTGAGTTCCTCTTCGCAAGATCTATGATTGCTACG
GCTGCTCGCGCTGCGAACCTCCCCTCTACTATTGATTTGGTCTGTACAGC
GTACAAATCTACCAAGGGGGACGGGTCCCCGCCTGCGGTGCTGGAGGAGG
AATGTCGCGATGGGAGACGGCTAGGGTTCAATGGGAAGCAGTGTATTCAT
CCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGGACCGGATCCGGAAGA
AGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATGAGAAGGCTGCGAGAG
CGGGACGGGGTGCGTGGACGCTTGATGGGAAAATGATTGATGTGCCGGTG
GCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGAGGCGTGTGGATTTGA
TGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGGAACCGGAGTGATCCC
GGGCTCCTCCCAACGCTTCATCGATAAATCCCGCACACTAACCGCCGACT
GCGTGGCCTACGATCTCGAAGACAGCGTAACTCCGCACAAGAAAGCGGAA
GCTCGGTCCCTGGTGCGGAGAGCACTCGACGAGCCCGCACCGCAGGGAAT
CCGCGAACGAGCCGTACGAATCAACTCCGTGGACAGCGGCCTCGCCCTAG
GCGATCTCACCGAAGTGATGGCCGCCAGAAACACACTCCGTCGCGCCCTT
CTCTACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51845ASPNIDRAFT_51845Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51845-T1ASPNIDRAFT_51845-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51845-T1.cdsASPNIDRAFT_51845-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51845-T1.exon3ASPNIDRAFT_51845-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51845-T1.exon2ASPNIDRAFT_51845-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51845-T1.exon1ASPNIDRAFT_51845-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51845-T1.utr5p1ASPNIDRAFT_51845-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR011206
DBxrefInterPro:IPR005000
DBxrefInterPro:IPR040442
DBxrefPFAM:PF03328
Productcitrate lyase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2176602..2177807 -
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