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ASPNIDRAFT_51852-T1, ASPNIDRAFT_51852-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51852-T1
Unique NameASPNIDRAFT_51852-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2144952..2146686-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51852-T1 ID=ASPNIDRAFT_51852-T1|Name=ASPNIDRAFT_51852-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1735bp|location=Sequence derived from alignment at ACJE01000004.1:2144952..2146686- (Aspergillus niger ATCC 1015)
CTCACTCCTCCCACCTTAATCTTGCTGTCCTGCTTCTAGAACCCCCCAGT
TTAATTTAAAAACCGGCTTTTCCTAGCTCCACGTATTGTACCTCGCACTG
ATCCCCATCTCCGCCCACTCCAACGCTACCGACCCAGCCTTCTCTGCCGG
CTCCAGGCGGCAGGCAATCAAACCAACCCCTCGATGGATCAGCACGACGA
CTTCGACAGCGTCTCGTGGAGGCATGACCCGGACAGCGATCTCTCGCGAC
CCACGACCTCCGGAACAGACACAGAGGAACAGGCGCCATACACTCACGAT
GTCAATGGCAAACGGAGGATGAGCAACGCTCAAGAAAGCCCTCAGGCTGG
ACCACTGGCGGATGCCGTCGACCTGGCGGGCATCGGCGACGGCGTACTAG
AGTGTCGGGTAGATTCACCGTTGAAGGAGAATGATGGAACGAAAGACGCT
TATATCTCCTATTTGGTTACAACTACGGTGGGTTATCTTTACCTTCAGTG
ATCTCAGATGGAAAAGGCTGTGCGGTTGCAGTGCATGCTGACTAGAATGA
TAGACCGATTTCAAGTCCTTCCAGAAACCCGAGTTCACCGTGCGACGCAG
ATTCACCGACTTCTACTTCCTATACAAGACACTTTATCGCGAATACCCTG
CCTGCGCCGTCCCGCCGCTGCCGGATAAGCATAAGATGGAGTATGTCCGC
GGCGATCGGTTCGGACCCGAATTCACTACCCGGCGAGCATGGTCTTTACA
TCGCTTTTTGAAACGGCTTACGCTGCATCCCGTGCTTCGTCGCGCACCGT
TACTGGCCATCTTCCTGGAATCGCCCGACTGGAATGCACACATGCGGTTG
CGGTCCACGCGCAACTCGACCAGCACCTCGGACGGCAGCGGGGTCCCTGG
GATCTTTGACAACTTTACCGACACCTTTGTCAACGCTTTCACCAAGGTGC
ATAAGCCGGATAAGCGGTTTATTGAAGTGCGGGAGAAGGCCGATAAACTG
GACGAGGACCTCAATCATGTGGAGAAGATTGTAGCCCGAGTGGCTCGGCG
GGAATCGGATCTTGAGGCAGACTATAATGACCTGGCTACGCAGTTCCGCA
AACTTGTACCCCTGGAACCGGAGGTGGAGGTGCCCCTACAAGTCTTTGCG
GCCTCGGTAGAGGAGACGGGGCGCGGGCTCAAGACGCTCAAGGATCACAC
TGACCAGAATTATCTGGGGTCGCTGCGGGATATGGAGGCGTACATTGTCT
CGCTTAAAGCCCTCCTCAAAACGCGCGAGCAGAAACAGCTCGACTTCGAA
GCGCTGGTTGACTATCGAAACAAGGCGGTGGCGGAGCGGGACTCCCTCGC
CTCTAACCCCTCGTCCTACTATGCCTCCAACCCGCTGACCTCGTCCCCGG
CCTCGTTCATCCGGTCCAAGATGGAGGACATGCGGGGCGTCGACCACGAG
CAGTCGCGACGCGAGAGGGTGCGGAAGTTGGAGCTTCGCATTGACGAGCT
CACGCGCGAGGTCGAATCGGCTAAAACGACGTCGGAGATGTTCGACGAGG
AAGTCGTGCGCGAGGTGGCAGACTTTGAGCGCATCAAGGCCGTAGAGTTC
CGGGATACGCTGGGAGCGTTGGCCGAGAAGCAGATCGAGTTCTACCAGGG
GGTACTGAATACCTGGGAACGATTTGTGGCTGAGATGGAGGGAGATCTGG
AAGAAGAGCATGACCCAGGCACGGAGGCCAGGTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2144952..2146686-

>ASPNIDRAFT_51852-T1 ID=ASPNIDRAFT_51852-T1|Name=ASPNIDRAFT_51852-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2952bp|location=Sequence derived from alignment at ACJE01000004.1:2144952..2146686- (Aspergillus niger ATCC 1015)
ACCGATTTCAAGTCCTTCCAGAAACCCGAGTTCACCGTGCGACGCAGATT
CACCGACTTCTACTTCCTATACAAGACACTTTATCGCGAATACCCTGCCT
GCGCCGTCCCGCCGCTGCCGGATAAGCATAAGATGGAGTATGTCCGCGGC
GATCGGTTCGGACCCGAATTCACTACCCGGCGAGCATGGTCTTTACATCG
CTTTTTGAAACGGCTTACGCTGCATCCCGTGCTTCGTCGCGCACCGTTAC
TGGCCATCTTCCTGGAATCGCCCGACTGGAATGCACACATGCGGTTGCGG
TCCACGCGCAACTCGACCAGCACCTCGGACGGCAGCGGGGTCCCTGGGAT
CTTTGACAACTTTACCGACACCTTTGTCAACGCTTTCACCAAGGTGCATA
AGCCGGATAAGCGGTTTATTGAAGTGCGGGAGAAGGCCGATAAACTGGAC
GAGGACCTCAATCATGTGGAGAAGATTGTAGCCCGAGTGGCTCGGCGGGA
ATCGGATCTTGAGGCAGACTATAATGACCTGGCTACGCAGTTCCGCAAAC
TTGTACCCCTGGAACCGGAGGTGGAGGTGCCCCTACAAGTCTTTGCGGCC
TCGGTAGAGGAGACGGGGCGCGGGCTCAAGACGCTCAAGGATCACACTGA
CCAGAATTATCTGGGGTCGCTGCGGGATATGGAGGCGTACATTGTCTCGC
TTAAAGCCCTCCTCAAAACGCGCGAGCAGAAACAGCTCGACTTCGAAGCG
CTGGTTGACTATCGAAACAAGGCGGTGGCGGAGCGGGACTCCCTCGCCTC
TAACCCCTCGTCCTACTATGCCTCCAACCCGCTGACCTCGTCCCCGGCCT
CGTTCATCCGGTCCAAGATGGAGGACATGCGGGGCGTCGACCACGAGCAG
TCGCGACGCGAGAGGGTGCGGAAGTTGGAGCTTCGCATTGACGAGCTCAC
GCGCGAGGTCGAATCGGCTAAAACGACGTCGGAGATGTTCGACGAGGAAG
TCGTGCGCGAGGTGGCAGACTTTGAGCGCATCAAGGCCGTAGAGTTCCGG
GATACGCTGGGAGCGTTGGCCGAGAAGCAGATCGAGTTCTACCAGGGGGT
ACTGAATACCTGGGAACGATTTGTGGCTGAGATGGAGGGAGATCTGGAAG
AAGAGCATGACCCAGGCACGGAGGCCAGGTGAATGGATCAGCACGACGAC
TTCGACAGCGTCTCGTGGAGGCATGACCCGGACAGCGATCTCTCGCGACC
CACGACCTCCGGAACAGACACAGAGGAACAGGCGCCATACACTCACGATG
TCAATGGCAAACGGAGGATGAGCAACGCTCAAGAAAGCCCTCAGGCTGGA
CCACTGGCGGATGCCGTCGACCTGGCGGGCATCGGCGACGGCGTACTAGA
GTGTCGGGTAGATTCACCGTTGAAGGAGAATGATGGAACGAAAGACGCTT
ATATCTCCTATTTGGTTACAACTACGACCGATTTCAAGTCCTTCCAGAAA
CCCGAGTTCACCGTGCGACGCAGATTCACCGACTTCTACTTCCTATACAA
GACACTTTATCGCGAATACCCTGCCTGCGCCGTCCCGCCGCTGCCGGATA
AGCATAAGATGGAGTATGTCCGCGGCGATCGGTTCGGACCCGAATTCACT
ACCCGGCGAGCATGGTCTTTACATCGCTTTTTGAAACGGCTTACGCTGCA
TCCCGTGCTTCGTCGCGCACCGTTACTGGCCATCTTCCTGGAATCGCCCG
ACTGGAATGCACACATGCGGTTGCGGTCCACGCGCAACTCGACCAGCACC
TCGGACGGCAGCGGGGTCCCTGGGATCTTTGACAACTTTACCGACACCTT
TGTCAACGCTTTCACCAAGGTGCATAAGCCGGATAAGCGGTTTATTGAAG
TGCGGGAGAAGGCCGATAAACTGGACGAGGACCTCAATCATGTGGAGAAG
ATTGTAGCCCGAGTGGCTCGGCGGGAATCGGATCTTGAGGCAGACTATAA
TGACCTGGCTACGCAGTTCCGCAAACTTGTACCCCTGGAACCGGAGGTGG
AGGTGCCCCTACAAGTCTTTGCGGCCTCGGTAGAGGAGACGGGGCGCGGG
CTCAAGACGCTCAAGGATCACACTGACCAGAATTATCTGGGGTCGCTGCG
GGATATGGAGGCGTACATTGTCTCGCTTAAAGCCCTCCTCAAAACGCGCG
AGCAGAAACAGCTCGACTTCGAAGCGCTGGTTGACTATCGAAACAAGGCG
GTGGCGGAGCGGGACTCCCTCGCCTCTAACCCCTCGTCCTACTATGCCTC
CAACCCGCTGACCTCGTCCCCGGCCTCGTTCATCCGGTCCAAGATGGAGG
ACATGCGGGGCGTCGACCACGAGCAGTCGCGACGCGAGAGGGTGCGGAAG
TTGGAGCTTCGCATTGACGAGCTCACGCGCGAGGTCGAATCGGCTAAAAC
GACGTCGGAGATGTTCGACGAGGAAGTCGTGCGCGAGGTGGCAGACTTTG
AGCGCATCAAGGCCGTAGAGTTCCGGGATACGCTGGGAGCGTTGGCCGAG
AAGCAGATCGAGTTCTACCAGGGGGTACTGAATACCTGGGAACGATTTGT
GGCTGAGATGGAGGGAGATCTGGAAGAAGAGCATGACCCAGGCACGGAGG
CCAGGTGAATGGATCAGCACGACGACTTCGACAGCGTCTCGTGGAGGCAT
GACCCGGACAGCGATCTCTCGCGACCCACGACCTCCGGAACAGACACAGA
GGAACAGGCGCCATACACTCACGATGTCAATGGCAAACGGAGGATGAGCA
ACGCTCAAGAAAGCCCTCAGGCTGGACCACTGGCGGATGCCGTCGACCTG
GCGGGCATCGGCGACGGCGTACTAGAGTGTCGGGTAGATTCACCGTTGAA
GGAGAATGATGGAACGAAAGACGCTTATATCTCCTATTTGGTTACAACTA
CG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNX4ASPNIDRAFT_51852Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51852-T1ASPNIDRAFT_51852-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51852-T1.cdsASPNIDRAFT_51852-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51852-T1.exon2ASPNIDRAFT_51852-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51852-T1.exon1ASPNIDRAFT_51852-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51852-T1.utr5p1ASPNIDRAFT_51852-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261PNZ
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR036871
DBxrefInterPro:IPR015404
DBxrefInterPro:IPR001683
DBxrefPFAM:PF09325
DBxrefPFAM:PF00787
Productintercellular trafficking and secretion
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2144952..2146686 -
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