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ASPNIDRAFT_51881-T1, ASPNIDRAFT_51881-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51881-T1
Unique NameASPNIDRAFT_51881-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1904447..1905915-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51881-T1 ID=ASPNIDRAFT_51881-T1|Name=ASPNIDRAFT_51881-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1469bp|location=Sequence derived from alignment at ACJE01000004.1:1904447..1905915- (Aspergillus niger ATCC 1015)
GCGCCATTTCGCAATTGGTCCTAGAAATTACTTTCGTTACTGAAGACTTC
TTCGCCACTCTTTTTGCAAGGAACTCTCTCCCCACTTTACCATCCACAGC
CCCGCGGGGCATCAGTTCAGGCTGCTGCTGCCGCAATCGCGAACCCGCCA
GCAGCAGGAACAATTACACAAGTACTACCTTGACAATGGCGCCTCCTCGA
CGGAACCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAA
AACACAAAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCCCATACGT
ATATGCCCATCCGACATATTACTATCACAGCAGAGAAGCAAAACGCATAC
TGATGATGGAGGACGACGGAAAATCTAGAATTCGCACAATAGCCTGGAAC
CCTACCGGCCAACTCATTGCCACCGGCTCCGCAGACCGTACCCTTCGAAT
CTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCC
ATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAA
CTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTC
AAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGT
CCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGGAAGGTGAGCAAA
ACACACACGAGCACGAAACCAATGCGCTCAGCATCAGGGACTTGTCAATT
GACCAAACGCCCAATATCTCTAGGACGACACCCTCATACCCATCTCCGTC
GAATCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTCAACGCTGC
AGCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAG
CCCTAGAACCACACCCTCAACCCATCCAAACAAACGCAACGACCTTCTCA
CATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGAC
CGGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGACGTCCTCC
ACACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCCTAGCACCC
ACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATG
GGATACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAATAACGGTG
GAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGC
GCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGC
GGAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATT
CGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATAT
TCTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATTGTAGGGGC
TGCGGGTGGAAGTTTGTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1904447..1905915-

>ASPNIDRAFT_51881-T1 ID=ASPNIDRAFT_51881-T1|Name=ASPNIDRAFT_51881-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3366bp|location=Sequence derived from alignment at ACJE01000004.1:1904447..1905915- (Aspergillus niger ATCC 1015)
GACGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCAT
CCACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGC
CCACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAACCC
ATCCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTC
CCCAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCA
TCTCTTACCCGTCCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCT
GCTTGCCTTTCCATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGG
GGGCAGCGACGCCCTCATCTCCCTATGGGATACAACAGACTGGATCTGCA
AGCGTACCGTTTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGG
AGCTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGG
TGGTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATA
CCGTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGG
CATCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGG
GCCAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGAATT
CGCACAATAGCCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGC
AGACCGTACCCTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACT
CCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAAC
CCCGTTCGAGACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCG
CGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAG
GCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTT
GGCAGGAAGATGGCGCCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTT
TGGTCTTGCATTTGGTGGTCTAAAAACACAAAACTACCATGATCCCGCTG
CTCGCGGGCCTGGTTCCCATACGACGACACCCTCATACCCATCTCCGTCG
AATCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTCAACGCTGCA
GCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAGC
CCTAGAACCACACCCTCAACCCATCCAAACAAACGCAACGACCTTCTCAC
ATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGACC
GGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGACGTCCTCCA
CACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCCTAGCACCCA
CAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATGG
GATACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAATAACGGTGG
AGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGCG
CTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGCG
GAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATTC
GGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATATT
CTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATTGTAGGGGCT
GCGGGTGGAAGTTTGTAGAATTCGCACAATAGCCTGGAACCCTACCGGCC
AACTCATTGCCACCGGCTCCGCAGACCGTACCCTTCGAATCTGGAACCCT
GAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGG
AATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCTAGCT
GCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGC
GTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGC
TGATGGAAGGGTAATGATCGTTGGCAGGAAGATGGCGCCTCCTCGACGGA
ACCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAAAACA
CAAAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCCCATACGACGAC
ACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCATCCACCC
AGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCT
TCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAACCCATCCAA
ACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGA
CCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTT
ACCCGTCCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCTGCTTGC
CTTTCCATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGGGGGCAG
CGACGCCCTCATCTCCCTATGGGATACAACAGACTGGATCTGCAAGCGTA
CCGTTTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTC
GACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAA
TGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTC
CTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCT
TCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGGCCAGG
CGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGAATTCGCACA
ATAGCCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGCAGACCG
TACCCTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCG
AACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTT
CGAGACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGTTTG
GGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGG
CATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGG
AAGATGGCGCCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCT
TGCATTTGGTGGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCG
GGCCTGGTTCCCATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51881ASPNIDRAFT_51881Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51881-T1ASPNIDRAFT_51881-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51881-T1.cdsASPNIDRAFT_51881-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51881-T1.exon3ASPNIDRAFT_51881-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51881-T1.exon2ASPNIDRAFT_51881-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51881-T1.exon1ASPNIDRAFT_51881-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51881-T1.utr5p1ASPNIDRAFT_51881-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1904447..1905915 -
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