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ASPNIDRAFT_51962-T1, ASPNIDRAFT_51962-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51962-T1
Unique NameASPNIDRAFT_51962-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1294113..1295565-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51962-T1 ID=ASPNIDRAFT_51962-T1|Name=ASPNIDRAFT_51962-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1453bp|location=Sequence derived from alignment at ACJE01000004.1:1294113..1295565- (Aspergillus niger ATCC 1015)
CCAATTCCCCCTTCCGGGTCTCACTTCTCTTCCTATATATCTACCACCTC
GACGACGCACCTTCGAACCTTATTCTTTCTCCATCATCAAACAAACTCTC
TCTCCCAACTTCCCACTCTTCCTACATAGCCCAACAGCTCGGTTGCGTGG
TCATTGCTCCTCCCTCCTTGCTTGCCTACTATCTACCCTTCTCTCGTCCC
TTATCCATCACCCGCGTGTGTCTACACTTGTGTGTGTGCGTGTGTGTGTC
TCTGGTCTAGTCCGCTCCGGGTACACTAAACCTTCCACACAACCACAACC
CCACGGTAAGAAGCCTGTTCCCTTTAAAGACGTCAACCCTTCCCCGCCCA
CGCATAGTACCTGAACTCTGTCGGCGCCCCCCTTCGACTGTCCAACTCTC
TTTAAAAACTCTCCGACCTCCTGGCATTTTCTGAAGTCTAACATTACATC
GATAGATTCTCCAACTACCTAAATTCTTCCATCAATCACTCGGATTAATT
TTCCCTTGCCAACTACTTCAGCAATGGCTCCCACTCATCGTCGTGGACCC
TGGGTTCCTGAAGAGGACCAGTTGCTCCTTCAGTTGGTTCGCGAACAAGG
CCCCAACAACTGGGTTCGCATCTCTCAGCACATGCACTACCGCTCGCCCA
AGCAATGCCGCGAGCGCTTCCACCAGAACCTCAAGCCCTCTTTGAACCGT
GAGCCCATCTCTGCTGAAGAGGGCTTGATGATCGAGCGGATGGTGAACGA
AATGGGCAAGCGCTGGGCCGAGATTGCACGACGCCTTGGAAACCGCAGCG
ACAATGCGGTTAAGAACTGGTGGAACGGCAGCATGAACCGCAAGAGAAGA
GGTCTCCCTACCTCCAGCTCGCCTCACGCCGGACGCACAATGCACGGACG
GGTCGAGGCCCCATATGCGCGGGCCTCTCTGTCCATGAGCAGCCCCATCA
GCCGCTCTCGCTACTCTTCCATCTCCAACGACAGACCTCTGACTTCCTGG
ACCAAGTCTCCCTCATCTCGGAGGGATTCCTTCTCCGCCGCTTCCATCGA
CTGCCCCCGCCAGTTGACCCCGATCTACACACTTCCTGCTCTTAACCGCC
CAGTGGAAACTCCTCTCACATCGCCTGCCTTCTCCGAAGCTTCTTCCATG
GAACCTCCCTCGATGATCTCGGACCACAACTCCGTTTCTTCCTCCTCTCC
CAGGACCATCGCCTCGCCACAGCTTCTTCCCCTTCCGGTGGACATGAGAC
AGCAATACGGCGACTTCCGCAGGCAGAGCACTTCGGACGATATCTACGCC
TATCACGATCTGTCGTTGAAGCAACGGTGGATCTCCGATCACCAGCAATG
GAACCAGCACTCTCCGCTATCTCCCACATGGTCTGCTCCGATCGAAGACA
AGACAGAAGCTCCGCGCGACTCGCGGATGGGTCTTCAGAACTTGCTCAAC
TAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:1294113..1295565-

>ASPNIDRAFT_51962-T1 ID=ASPNIDRAFT_51962-T1|Name=ASPNIDRAFT_51962-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=930bp|location=Sequence derived from alignment at ACJE01000004.1:1294113..1295565- (Aspergillus niger ATCC 1015)
ATGGCTCCCACTCATCGTCGTGGACCCTGGGTTCCTGAAGAGGACCAGTT
GCTCCTTCAGTTGGTTCGCGAACAAGGCCCCAACAACTGGGTTCGCATCT
CTCAGCACATGCACTACCGCTCGCCCAAGCAATGCCGCGAGCGCTTCCAC
CAGAACCTCAAGCCCTCTTTGAACCGTGAGCCCATCTCTGCTGAAGAGGG
CTTGATGATCGAGCGGATGGTGAACGAAATGGGCAAGCGCTGGGCCGAGA
TTGCACGACGCCTTGGAAACCGCAGCGACAATGCGGTTAAGAACTGGTGG
AACGGCAGCATGAACCGCAAGAGAAGAGGTCTCCCTACCTCCAGCTCGCC
TCACGCCGGACGCACAATGCACGGACGGGTCGAGGCCCCATATGCGCGGG
CCTCTCTGTCCATGAGCAGCCCCATCAGCCGCTCTCGCTACTCTTCCATC
TCCAACGACAGACCTCTGACTTCCTGGACCAAGTCTCCCTCATCTCGGAG
GGATTCCTTCTCCGCCGCTTCCATCGACTGCCCCCGCCAGTTGACCCCGA
TCTACACACTTCCTGCTCTTAACCGCCCAGTGGAAACTCCTCTCACATCG
CCTGCCTTCTCCGAAGCTTCTTCCATGGAACCTCCCTCGATGATCTCGGA
CCACAACTCCGTTTCTTCCTCCTCTCCCAGGACCATCGCCTCGCCACAGC
TTCTTCCCCTTCCGGTGGACATGAGACAGCAATACGGCGACTTCCGCAGG
CAGAGCACTTCGGACGATATCTACGCCTATCACGATCTGTCGTTGAAGCA
ACGGTGGATCTCCGATCACCAGCAATGGAACCAGCACTCTCCGCTATCTC
CCACATGGTCTGCTCCGATCGAAGACAAGACAGAAGCTCCGCGCGACTCG
CGGATGGGTCTTCAGAACTTGCTCAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51962ASPNIDRAFT_51962Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51962-T1.cdsASPNIDRAFT_51962-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51962-T1.exon2ASPNIDRAFT_51962-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51962-T1.exon1ASPNIDRAFT_51962-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51962-T1.utr5p1ASPNIDRAFT_51962-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51962-T1ASPNIDRAFT_51962-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1294113..1295565 -
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