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ASPNIDRAFT_51997-T1, ASPNIDRAFT_51997-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51997-T1
Unique NameASPNIDRAFT_51997-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1037511..1038999-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51997-T1 ID=ASPNIDRAFT_51997-T1|Name=ASPNIDRAFT_51997-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1489bp|location=Sequence derived from alignment at ACJE01000004.1:1037511..1038999- (Aspergillus niger ATCC 1015)
TTCTATTCTTATTACAAATATCCCAGTAATATTATCTTCCAAGTTGTAAA
CGTAGTAATGGTAGAAAAGCAAGATTAGGGTCTTGAGTGGCGTGCATTTA
GCCGGCAAATGGGTTAATTTAGCCGGGCCCGACTTTGGATGGCTTCCGGC
CAGCCTTTGGATAAGTTACTTCCCCAGTTCAAAACAGCCGCCACAACTTC
ATTTAGCCTCCAATGCCGCTCTCCGTGCCGTGTATGGCGCCTCCAGTGGA
TACGCGCAATGGATTAAGTTCATAATGCCATGACCGAGGGGTAGTTACTT
ATTACCCCTCCAAACCTTCCCCTTCTCTCCCTTCATCCCCCCCTGATCCT
GCTTCGACCGCGTCTCTATACCTTGTCTCAACACGACCTTGTTACTCCTT
AATCACCATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTACGACATGC
CCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGACACCTGCGCCGAC
CAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTTTGACGGCGCCTG
CGGTACTACCCTCCCCTCCCCTTATAAATCACTACCAATTCCCAATCTAA
ACACGCAAACCAGACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGC
CCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCT
CCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCGTCGAGCCCATTTGC
CGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTCGACCTGTACATTGT
GCACTTCCCCATCTCTCTGAAATACGTCGACCCTGCGGTCCGCTACCCGC
CGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCGGCAACGCCACGATC
CAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCG
CAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCTGC
GGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCGAGCATCACCCGTAC
CTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGT
TACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGC
AGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGC
ATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGC
GACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCGGT
TGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGATC
AAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTGGG
AGTGAGTTTCCTTCCGCTTTTTATTTGATACGTGGGGATATTTGCTAACT
TGATTATTACAGTACGGACTCTACGCTCCTATTTTCTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1037511..1038999-

>ASPNIDRAFT_51997-T1 ID=ASPNIDRAFT_51997-T1|Name=ASPNIDRAFT_51997-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2880bp|location=Sequence derived from alignment at ACJE01000004.1:1037511..1038999- (Aspergillus niger ATCC 1015)
TACGGACTCTACGCTCCTATTTTCTAGACTATGGCAACGAAGTCGAAGCC
GGCCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGA
GCTCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCG
TCGAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTC
GACCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACGTCGACCCTGC
GGTCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCG
GCAACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGAC
AAGAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGT
CATGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCG
AGCATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAG
GAGGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCT
CGAGTTGAGTGTGCAGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATC
AGCTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTG
TTGTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAA
CAACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGG
AGGAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTC
AATGATCCTTTGGGAATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTA
CGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGACACCT
GCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTTTGAC
GGCGCCTGCGTACGGACTCTACGCTCCTATTTTCTAGACTATGGCAACGA
AGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCA
AGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGAT
GGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCAT
CGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACG
TCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAA
CTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTC
GCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTG
CGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACG
CTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTA
TGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGT
TGAGTTTCCTCGAGTTGAGTGTGCAGAATGCGGTGGATTCGCCGCCGCTG
TTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCC
GGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCC
CCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGG
TGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGG
GTTGCGGTTCAATGATCCTTTGGGAATGGCCTCTCCCACAGTAAAGCTAA
ACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAAC
AACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCG
TCTGTTTGACGGCGCCTGCGTACGGACTCTACGCTCCTATTTTCTAGACT
ATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGAC
GGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAG
CTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTG
ACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCT
CTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGA
GAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAG
CGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGT
AACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCG
TCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGAT
TGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCT
TTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGCAGAATGCGGTGGATTC
GCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACG
GAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATT
GCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGA
TGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGT
TGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAATGGCCTCTCCCACA
GTAAAGCTAAACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTG
GAAGGTGAACAACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGG
AAGGATACCGTCTGTTTGACGGCGCCTGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
XYL1ASPNIDRAFT_51997Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51997-T1ASPNIDRAFT_51997-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51997-T1.cdsASPNIDRAFT_51997-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51997-T1.exon3ASPNIDRAFT_51997-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51997-T1.exon2ASPNIDRAFT_51997-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51997-T1.exon1ASPNIDRAFT_51997-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51997-T1.utr5p1ASPNIDRAFT_51997-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
ProductNAD(P)H-dependent D-xylose reductase (XR)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1037511..1038999 -
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