You are here

Home

ASPNIDRAFT_52017-T1, ASPNIDRAFT_52017-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52017-T1
Unique NameASPNIDRAFT_52017-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:889326..890367+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52017-T1 ID=ASPNIDRAFT_52017-T1|Name=ASPNIDRAFT_52017-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1042bp|location=Sequence derived from alignment at ACJE01000004.1:889326..890367+ (Aspergillus niger ATCC 1015)
GTACTCCCTTACTTTTCCCTTTTTTTGCATGTTCGATTGACTATCAACAC
TGTCTGTCTGTCTGTTGTGTCCGCTCTCCGGCCGACTGACGAATTGCCCC
ATCCAGCAATCCTAACGAAGACCAGTCCTTCTGTTCTTCGCCTCCCGCAT
TCGGGGTCCTTTTGTATGTAAACCAAGTCATGCCGCTCTGTCCGCGTTTT
GCCAATCTAACAGTCACTCCGGGCTGGTAGGAATTATATCAATCCCATCC
ACTACATTTTCTCTCACACCTTAACCCCGCCATCCCATCTTTATACTCCG
TTGACTATCATCTTCATCCCCCCACAATCCACTATTAAATCAACATGGCT
ACCGCTCAGGCTGAGAAACCAGCCACCAAAACCTTTGCTAATGATCCCGA
TGATGTCTCCGACTACGATTCCGAGGATGACTATTCCGACGACGACACCC
AACAAAAGCCTCAACAGCAACAGCAACAACAACAACAACAACGCCGCCGT
CGTCGTCCCCAGCAGCAAAATCCCAACGATGAAGACGACACCTACTATTC
CGATGAGTACTCGGATGACTACGATGACTACGACGATGAAGATGATGACT
ACTACGACGACGAGGAAGAAGAGGTCCAGGCCATGGAACGCTACCAGCCC
ACCACCATCAGCAGCCGCGACAATGTGCCCGCACAACCGATCGCAAACGG
CGGCATGCAGGAGGCGGAAGGCAAAACCGGCGATGACTGGGAGGATCAAG
ACGGAATGAAGTTGAAATTGGAATTGAACTTGGATATCGAAGTCGAATTA
AAGGCTCATATCCATGGTGATTTGACGTTGTCGTTGCTGTAAGTACTCCC
CTTTCTTCTGCTTCTGATCGATCACATTGATTGCGGCGGCGGGGAGAATT
GGCCCTGCGTGCGGGCCAAATGCATGCAATCAACCAAATCACATCACTTA
ATGTCGCTTGCTACTAGAACGTGATCGAGATCCGATGGTTGACATGATAC
CCTTTCTCTTTCCAGCGCATAATTTCGCCTCTTTGCCGCCTC
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:889326..890367+

>ASPNIDRAFT_52017-T1 ID=ASPNIDRAFT_52017-T1|Name=ASPNIDRAFT_52017-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1002bp|location=Sequence derived from alignment at ACJE01000004.1:889326..890367+ (Aspergillus niger ATCC 1015)
ATGGCTACCGCTCAGGCTGAGAAACCAGCCACCAAAACCTTTGCTAATGA
TCCCGATGATGTCTCCGACTACGATTCCGAGGATGACTATTCCGACGACG
ACACCCAACAAAAGCCTCAACAGCAACAGCAACAACAACAACAACAACGC
CGCCGTCGTCGTCCCCAGCAGCAAAATCCCAACGATGAAGACGACACCTA
CTATTCCGATGAGTACTCGGATGACTACGATGACTACGACGATGAAGATG
ATGACTACTACGACGACGAGGAAGAAGAGGTCCAGGCCATGGAACGCTAC
CAGCCCACCACCATCAGCAGCCGCGACAATGTGCCCGCACAACCGATCGC
AAACGGCGGCATGCAGGAGGCGGAAGGCAAAACCGGCGATGACTGGGAGG
ATCAAGACGGAATGAAGTTGAAATTGGAATTGAACTTGGATATCGAAGTC
GAATTAAAGGCTCATATCCATGGTGATTTGACGTTGTCGTTGCTCGCATA
AATGGCTACCGCTCAGGCTGAGAAACCAGCCACCAAAACCTTTGCTAATG
ATCCCGATGATGTCTCCGACTACGATTCCGAGGATGACTATTCCGACGAC
GACACCCAACAAAAGCCTCAACAGCAACAGCAACAACAACAACAACAACG
CCGCCGTCGTCGTCCCCAGCAGCAAAATCCCAACGATGAAGACGACACCT
ACTATTCCGATGAGTACTCGGATGACTACGATGACTACGACGATGAAGAT
GATGACTACTACGACGACGAGGAAGAAGAGGTCCAGGCCATGGAACGCTA
CCAGCCCACCACCATCAGCAGCCGCGACAATGTGCCCGCACAACCGATCG
CAAACGGCGGCATGCAGGAGGCGGAAGGCAAAACCGGCGATGACTGGGAG
GATCAAGACGGAATGAAGTTGAAATTGGAATTGAACTTGGATATCGAAGT
CGAATTAAAGGCTCATATCCATGGTGATTTGACGTTGTCGTTGCTCGCAT
AA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52017ASPNIDRAFT_52017Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52017-T1ASPNIDRAFT_52017-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52017-T1.utr5p1ASPNIDRAFT_52017-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_52017-T1.utr5p2ASPNIDRAFT_52017-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52017-T1.exon1ASPNIDRAFT_52017-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52017-T1.exon2ASPNIDRAFT_52017-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52017-T1.exon3ASPNIDRAFT_52017-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52017-T1.cdsASPNIDRAFT_52017-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52017-T1.utr3p1ASPNIDRAFT_52017-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:889326..890367 +
Powered by Drupal