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ASPNIDRAFT_52026-T1, ASPNIDRAFT_52026-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52026-T1
Unique NameASPNIDRAFT_52026-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:817722..818794-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52026-T1 ID=ASPNIDRAFT_52026-T1|Name=ASPNIDRAFT_52026-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1073bp|location=Sequence derived from alignment at ACJE01000004.1:817722..818794- (Aspergillus niger ATCC 1015)
ATGTCGTTTTTTCCGCGTCTCTGCAGTGCAGATGTAGGTCATTCCAAGTC
CCCTGGCAACCACCCGTCGAATTACGGTCGAATCCCGAAAGATGGCACGA
ATATATCATCGAAAATGAAATAAGGAAACTGACCCAGGCTCTTCTCCGAT
TAATAGTTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCG
AGTCGAGCGACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAG
GGTATCCCCCCGGATCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTTGA
GGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGTATGAGTGAAAC
GGTTCCGCGAATCATCTATACGTCGATTTCGTCTGCTCGGATAGTCGGTT
ACGAACATGATGCGATACGGGTCGGTTGGGGCGCCACAACATACTACTTG
GGTTTGAGGGGAGGATCAATCGGCACGGTCGCATTCATGAACGTTTCACG
ACTATCGACATTCGATGCGACTTGACTATTGGGGATATAGTTTGACTGAC
GGGTTCTTTTTCTCGACTATAGGAGTCCACCCTCCACCTGGTCCTCCGTC
TCCGTGGTGGTATCATCGAGCCCTCCCTTAAGGCTCTCGCCTCCAAGTAC
AACTGCGAGAAGTCCATCTGCCGCAAGTGCTACGTACGTCCATCCATCTA
TTCTACTTTTCTATTCTTCCGACTCGATCCCGCCCTCTTTTGAGTCCCGC
CTAGCGAACCATTTCCCCCACTAACATTGATCCTCCGATTAGGCCCGTCT
TCCCCCCCGTGCCACCAACTGCCGCAAGAAGAAGTGTGGTCACACCAACC
AGCTCCGCCCCAAGAAGAAGCTCAAATAGACGATTATCTTATTACGGTTT
TTCTGCGTTGCTGGGGAAAAGAGCTGCTGGGGTTACGATACGATTGCAAC
GTGGGAGATTTTCTACATGGCGTTGGAATGATGAATCATTACTTATAGCC
GAAGTCAAATGTCTATAGTTGACTCCTCGGGAAGAAGTTGCAATCAAAGC
ACAACCTGTAAAATTCAAAAAAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:817722..818794-

>ASPNIDRAFT_52026-T1 ID=ASPNIDRAFT_52026-T1|Name=ASPNIDRAFT_52026-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1704bp|location=Sequence derived from alignment at ACJE01000004.1:817722..818794- (Aspergillus niger ATCC 1015)
GCCCGTCTTCCCCCCCGTGCCACCAACTGCCGCAAGAAGAAGTGTGGTCA
CACCAACCAGCTCCGCCCCAAGAAGAAGCTCAAATAGGAGTCCACCCTCC
ACCTGGTCCTCCGTCTCCGTGGTGGTATCATCGAGCCCTCCCTTAAGGCT
CTCGCCTCCAAGTACAACTGCGAGAAGTCCATCTGCCGCAAGTGCTACTT
TCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC
GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCC
CCCGGATCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCC
GCACCCTGAGCGACTACAACATCCAGAAGATGTCGTTTTTTCCGCGTCTC
TGCAGTGCAGATGTAGGTCATTCCAAGCCCGTCTTCCCCCCCGTGCCACC
AACTGCCGCAAGAAGAAGTGTGGTCACACCAACCAGCTCCGCCCCAAGAA
GAAGCTCAAATAGGAGTCCACCCTCCACCTGGTCCTCCGTCTCCGTGGTG
GTATCATCGAGCCCTCCCTTAAGGCTCTCGCCTCCAAGTACAACTGCGAG
AAGTCCATCTGCCGCAAGTGCTACTTTCGTCAAGACCCTCACGGGTAAGA
CCATTACCCTCGACGTCGAGTCGAGCGACACCATCGACAACGTCAAGACC
AAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTTATCTT
CGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCC
AGAAGATGTCGTTTTTTCCGCGTCTCTGCAGTGCAGATGTAGGTCATTCC
AAGCCCGTCTTCCCCCCCGTGCCACCAACTGCCGCAAGAAGAAGTGTGGT
CACACCAACCAGCTCCGCCCCAAGAAGAAGCTCAAATAGGAGTCCACCCT
CCACCTGGTCCTCCGTCTCCGTGGTGGTATCATCGAGCCCTCCCTTAAGG
CTCTCGCCTCCAAGTACAACTGCGAGAAGTCCATCTGCCGCAAGTGCTAC
TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGA
GCGACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATC
CCCCCGGATCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGG
CCGCACCCTGAGCGACTACAACATCCAGAAGATGTCGTTTTTTCCGCGTC
TCTGCAGTGCAGATGTAGGTCATTCCAAGCCCGTCTTCCCCCCCGTGCCA
CCAACTGCCGCAAGAAGAAGTGTGGTCACACCAACCAGCTCCGCCCCAAG
AAGAAGCTCAAATAGGAGTCCACCCTCCACCTGGTCCTCCGTCTCCGTGG
TGGTATCATCGAGCCCTCCCTTAAGGCTCTCGCCTCCAAGTACAACTGCG
AGAAGTCCATCTGCCGCAAGTGCTACTTTCGTCAAGACCCTCACGGGTAA
GACCATTACCCTCGACGTCGAGTCGAGCGACACCATCGACAACGTCAAGA
CCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTTATC
TTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACAT
CCAGAAGATGTCGTTTTTTCCGCGTCTCTGCAGTGCAGATGTAGGTCATT
CCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBI1ASPNIDRAFT_52026Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52026-T1ASPNIDRAFT_52026-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52026-T1.cdsASPNIDRAFT_52026-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52026-T1.utr3p1ASPNIDRAFT_52026-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52026-T1.exon4ASPNIDRAFT_52026-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52026-T1.exon3ASPNIDRAFT_52026-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52026-T1.exon2ASPNIDRAFT_52026-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52026-T1.exon1ASPNIDRAFT_52026-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR019954
DBxrefInterPro:IPR038587
DBxrefInterPro:IPR000626
DBxrefInterPro:IPR001975
DBxrefInterPro:IPR019956
DBxrefPFAM:PF14560
DBxrefPFAM:PF00240
DBxrefPFAM:PF01020
DBxrefPFAM:PF11976
ProductPolyubiquitin
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:817722..818794 -
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