You are here

Home

ASPNIDRAFT_52127-T1, ASPNIDRAFT_52127-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52127-T1
Unique NameASPNIDRAFT_52127-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:427745..428931+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52127-T1 ID=ASPNIDRAFT_52127-T1|Name=ASPNIDRAFT_52127-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1187bp|location=Sequence derived from alignment at ACJE01000010.1:427745..428931+ (Aspergillus niger ATCC 1015)
CTGACCTCTAGCATCACTCTCCTCTTCACCTGCTCGGGCCGACAATCTCT
TCACAAAATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCC
CGAACCCCGCTGTCCATCATCGCTATGCTTGGAATTCGACGATCGCTAAC
CCCTATGACGTACATTAGGCCGACAAAGCGCTTAGCAGCGCATCTGGTGG
CTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCTGATC
TCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAGTAAGCCA
ATGATCTCCCCCCTGTCTCGGATCAACGAGCTCTAACTCGTTGCCAAACA
CACAGACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATTCAGA
CCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCTGACTGAAGCG
TTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGCTCTC
CAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGTCGCGCGGCCA
CGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGATACG
AAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACGGTGA
CAATGCTGAAGCGTACGTCTATCCTCGGCGTTTTCATATACAAATCTAAC
TTGATGTGTTGTTCTCCAGACTTGCCAACAAGCACTACCTTAAGGCAGCG
GACCTGGCCGCTCTCGAAGGCGACTACTACAAGGCTATTGAGCACTACGA
GCGGATCGGCCGCTCATCAATCAATAACAACCTGATGAAATGGTCCGTTA
AGGACTACTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGAATGTACGG
CTGTCCTCATCTGCCCAAACCATTTACACAGTACTGATTCCACACAGGAC
CTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACACCAC
CTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGACCA
TCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTCGAC
CAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGATCAA
GAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:427745..428931+

>ASPNIDRAFT_52127-T1 ID=ASPNIDRAFT_52127-T1|Name=ASPNIDRAFT_52127-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4395bp|location=Sequence derived from alignment at ACJE01000010.1:427745..428931+ (Aspergillus niger ATCC 1015)
ATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAGCCGACAAAGCGCTTAG
CAGCGCATCTGGTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACG
AGAATGCGGCTGATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAG
AAGCAGAACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATTCA
GACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCTGACTGAAG
CGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGCTC
TCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGTCGCGCGGC
CACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGATA
CGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACGGT
GACAATGCTGAAGCACTTGCCAACAAGCACTACCTTAAGGCAGCGGACCT
GGCCGCTCTCGAAGGCGACTACTACAAGGCTATTGAGCACTACGAGCGGA
TCGGCCGCTCATCAATCAATAACAACCTGATGAAATGGTCCGTTAAGGAC
TACTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGAATGACCTGGTGGC
CGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACACCACCTTCGCCT
CGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGACCATCGAAGCC
GGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTCGACCAGCTCAG
CAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGATCAAGAACAGTA
TCGAGGAGCAGGGCGAGGATTTCTCTTAGATGGCCCAAGATCCCAGAGTT
CTGCTCCAACGAGCCGACAAAGCGCTTAGCAGCGCATCTGGTGGCTTTAG
CTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCTGATCTCTACA
CACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAACAAGGAAGCTGGT
CTTGCCTTCGAAAAGGCTGCCTCCATTCAGACCCAGAACCTTAACGAGCC
CGACGATGCAGCAAACACCCTGACTGAAGCGTTCAAGGTCTACCGCAAAT
CCGACCCCGAGGACGCCGCTCGCGTGCTCTCCAGTGCCATCCAACACTAC
GTGCTAAAGGGTAACCTCCGTCGCGCGGCCACGCAACAGCAACATCTGGC
CGAGGTCTATGAGGTGGAACTGGGAGATACGAAGAAGGCGCTGGAAGCCT
ACGAGAAAGCGGCGGAGTGGTTCGACGGTGACAATGCTGAAGCACTTGCC
AACAAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTA
CTACAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATA
ACAACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATC
TGCCACTTGGCGACGAATGACCTGGTGGCCGCCAACCGCGCCCTCGAAAA
CTACCGCGACATCGACACCACCTTCGCCTCGACAAGAGAGCACCAGCTCC
TCGTCGACCTGATCCAGACCATCGAAGCCGGCGACCAGGAAGCATTCGCC
GACAAGCTGTTCCAATTCGACCAGCTCAGCAAGTTGGACAAGTGGAAGAC
AACTCTTCTGTTGCGGATCAAGAACAGTATCGAGGAGCAGGGCGAGGATT
TCTCTTAGATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAGCCGACAAA
GCGCTTAGCAGCGCATCTGGTGGCTTTAGCTTCTTCGGTGGAAGGACAGA
GAAGTACGAGAATGCGGCTGATCTCTACACACAAGCTGCGAACGCCTTCC
GAGTGCAGAAGCAGAACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCACTTGCCAACAAGCACTACCTTAAGGCA
GCGGACCTGGCCGCTCTCGAAGGCGACTACTACAAGGCTATTGAGCACTA
CGAGCGGATCGGCCGCTCATCAATCAATAACAACCTGATGAAATGGTCCG
TTAAGGACTACTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGAATGAC
CTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACACCAC
CTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGACCA
TCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTCGAC
CAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGATCAA
GAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGATGGCCCAAGATC
CCAGAGTTCTGCTCCAACGAGCCGACAAAGCGCTTAGCAGCGCATCTGGT
GGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCTGA
TCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAACAAGG
AAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATTCAGACCCAGAACCTT
AACGAGCCCGACGATGCAGCAAACACCCTGACTGAAGCGTTCAAGGTCTA
CCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGCTCTCCAGTGCCATCC
AACACTACGTGCTAAAGGGTAACCTCCGTCGCGCGGCCACGCAACAGCAA
CATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGATACGAAGAAGGCGCT
GGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACGGTGACAATGCTGAAG
CACTTGCCAACAAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAA
GGCGACTACTACAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATC
AATCAATAACAACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGG
CTGGCATCTGCCACTTGGCGACGAATGACCTGGTGGCCGCCAACCGCGCC
CTCGAAAACTACCGCGACATCGACACCACCTTCGCCTCGACAAGAGAGCA
CCAGCTCCTCGTCGACCTGATCCAGACCATCGAAGCCGGCGACCAGGAAG
CATTCGCCGACAAGCTGTTCCAATTCGACCAGCTCAGCAAGTTGGACAAG
TGGAAGACAACTCTTCTGTTGCGGATCAAGAACAGTATCGAGGAGCAGGG
CGAGGATTTCTCTTAGATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAG
CCGACAAAGCGCTTAGCAGCGCATCTGGTGGCTTTAGCTTCTTCGGTGGA
AGGACAGAGAAGTACGAGAATGCGGCTGATCTCTACACACAAGCTGCGAA
CGCCTTCCGAGTGCAGAAGCAGAACAAGGAAGCTGGTCTTGCCTTCGAAA
AGGCTGCCTCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCA
AACACCCTGACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGA
CGCCGCTCGCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTA
ACCTCCGTCGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAG
GTGGAACTGGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGC
GGAGTGGTTCGACGGTGACAATGCTGAAGCACTTGCCAACAAGCACTACC
TTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTACAAGGCTATT
GAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACAACCTGATGAA
ATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGCCACTTGGCGA
CGAATGACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATC
GACACCACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGAT
CCAGACCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCC
AATTCGACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTG
CGGATCAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52127ASPNIDRAFT_52127Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52127-T1ASPNIDRAFT_52127-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52127-T1.utr5p1ASPNIDRAFT_52127-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52127-T1.exon1ASPNIDRAFT_52127-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52127-T1.exon2ASPNIDRAFT_52127-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52127-T1.exon3ASPNIDRAFT_52127-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52127-T1.exon4ASPNIDRAFT_52127-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52127-T1.exon5ASPNIDRAFT_52127-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52127-T1.cdsASPNIDRAFT_52127-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteBUSCO:EOG09263X22
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR000744
DBxrefPFAM:PF14938
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:427745..428931 +
Powered by Drupal