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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:499389..500046+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52139-T1 ID=ASPNIDRAFT_52139-T1|Name=ASPNIDRAFT_52139-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=658bp|location=Sequence derived from alignment at ACJE01000010.1:499389..500046+ (Aspergillus niger ATCC 1015)
GAGAATTAAACCAAACATGCCCTGGTCCGCCGCTCTCCCTCAGGCGATGT
TCGCCCACCCCCTAGTATCCGTCGTGACGCCCATCGCGACGGGTTCTCTA
GTCGGGTACCATACCAACCGTGAGCTTCCCCTACCTATGTCTACCACTCA
ATTCCACCTCTTTGAGTTCAAATATTAACTAAAACCAGGCAAAGGTCGCA
CCAAACAAGTCTACCATTCTCTCAAAAAACCCCCTCTCTACCCCCCAACC
TGGGCCTTCCCGGTCGTCTGGACCGTCCTCTACGGCATGATGGGCTTCGC
AATCCACCACGCAACAGTATCAGGAACCATAGCTACCGCATACCCACCTT
CCTCATCATCATCTATTGTCCAAGACTGGGCCGTCAAGTCTCAGACCCTA
TATATTTCCCAGCTGGCGTTGAATCACCTCTGGATGCCGCTGTTCTTCAT
GTTCCGGAAGCCGGCGTGGGCGTTGGCGGATCTGCTGCTTCTGAGCGGGA
ATGTGGCGACGTTGATGCATATCTGGTGGAAGCATGACCGGGTGGCGTTC
TGGTTGATGACGCCGTATGCGGCTTGGTTGGGGGTTGCGACGTATTTGAA
TGCTGGGGTGGGGTACTTGAATAATTGGGTGATTGGGGATGGGAGGAAGG
AGGAGTGA back to topCoding sequence (CDS) from alignment at ACJE01000010.1:499389..500046+ >ASPNIDRAFT_52139-T1 ID=ASPNIDRAFT_52139-T1|Name=ASPNIDRAFT_52139-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1146bp|location=Sequence derived from alignment at ACJE01000010.1:499389..500046+ (Aspergillus niger ATCC 1015)
ATGCCCTGGTCCGCCGCTCTCCCTCAGGCGATGTTCGCCCACCCCCTAGT
ATCCGTCGTGACGCCCATCGCGACGGGTTCTCTAGTCGGGTACCATACCA
ACCGCAAAGGTCGCACCAAACAAGTCTACCATTCTCTCAAAAAACCCCCT
CTCTACCCCCCAACCTGGGCCTTCCCGGTCGTCTGGACCGTCCTCTACGG
CATGATGGGCTTCGCAATCCACCACGCAACAGTATCAGGAACCATAGCTA
CCGCATACCCACCTTCCTCATCATCATCTATTGTCCAAGACTGGGCCGTC
AAGTCTCAGACCCTATATATTTCCCAGCTGGCGTTGAATCACCTCTGGAT
GCCGCTGTTCTTCATGTTCCGGAAGCCGGCGTGGGCGTTGGCGGATCTGC
TGCTTCTGAGCGGGAATGTGGCGACGTTGATGCATATCTGGTGGAAGCAT
GACCGGGTGGCGTTCTGGTTGATGACGCCGTATGCGGCTTGGTTGGGGGT
TGCGACGTATTTGAATGCTGGGGTGGGGTACTTGAATAATTGGGTGATTG
GGGATGGGAGGAAGGAGGAGTGAATGCCCTGGTCCGCCGCTCTCCCTCAG
GCGATGTTCGCCCACCCCCTAGTATCCGTCGTGACGCCCATCGCGACGGG
TTCTCTAGTCGGGTACCATACCAACCGCAAAGGTCGCACCAAACAAGTCT
ACCATTCTCTCAAAAAACCCCCTCTCTACCCCCCAACCTGGGCCTTCCCG
GTCGTCTGGACCGTCCTCTACGGCATGATGGGCTTCGCAATCCACCACGC
AACAGTATCAGGAACCATAGCTACCGCATACCCACCTTCCTCATCATCAT
CTATTGTCCAAGACTGGGCCGTCAAGTCTCAGACCCTATATATTTCCCAG
CTGGCGTTGAATCACCTCTGGATGCCGCTGTTCTTCATGTTCCGGAAGCC
GGCGTGGGCGTTGGCGGATCTGCTGCTTCTGAGCGGGAATGTGGCGACGT
TGATGCATATCTGGTGGAAGCATGACCGGGTGGCGTTCTGGTTGATGACG
CCGTATGCGGCTTGGTTGGGGGTTGCGACGTATTTGAATGCTGGGGTGGG
GTACTTGAATAATTGGGTGATTGGGGATGGGAGGAAGGAGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004307 |
| DBxref | InterPro:IPR038330 |
| DBxref | PFAM:PF03073 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:499389..500046 + |
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