You are here

Home

ASPNIDRAFT_52186-T1, ASPNIDRAFT_52186-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52186-T1
Unique NameASPNIDRAFT_52186-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:926588..927686-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52186-T1 ID=ASPNIDRAFT_52186-T1|Name=ASPNIDRAFT_52186-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1099bp|location=Sequence derived from alignment at ACJE01000010.1:926588..927686- (Aspergillus niger ATCC 1015)
ATGGACTTTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAA
CCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTG
GCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTG
AGCTTGTTCGTGCTCCCTGGCAAGCCCGTATGTTGTCCCTGACAATCTCA
ATTGGAGACTATATCACTGACTTCCAATCTGCCAGCTCCGCTCCTTCGGC
CCTAAGGGCAGCTGGGCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAA
GGAATTCGCTCTTCAGCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTT
CCCGTACTGCATCCAAGCTTGATACCCTTTCCAATGAAATCACAACCAAG
TTCCCCTCCGTGCAGACCAAGACCTTGGCGATGGACTTCGCCCGCAACCA
GGACAGCGACTACGAGAAGCTGAAGGAATTGGTGGATGAATTGGACGTGT
CCGTCCTGGTCAACAACGTTGGAAAGAGTCACAGCATCCCCACTCCCTTC
GCTCTGACCCCCGAGGATGAGATGACTGATATCGTGACCATCAACTGCCT
GGGTACCTTGCGGGCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCA
AGCGCGGATTGGTCTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACT
CCTCTTCTTGCTACCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTC
CACTTCCCTTGGTTCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGG
TCCAGGCCTACCTTATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGT
GCTACGATCCCCGACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGAT
TGGCCGCAACGGCGGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACT
GGAGCCACGGATTGATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATG
GGCAAGATTGTCGTTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAA
GCGTGCTCTGCGCAAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:926588..927686-

>ASPNIDRAFT_52186-T1 ID=ASPNIDRAFT_52186-T1|Name=ASPNIDRAFT_52186-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2082bp|location=Sequence derived from alignment at ACJE01000010.1:926588..927686- (Aspergillus niger ATCC 1015)
CTCCGCTCCTTCGGCCCTAAGGGCAGCTGGGCCGTGGTCACAGGTGCCTC
CGATGGACTCGGCAAGGAATTCGCTCTTCAGCTCGCCCGCGCTGACTTCA
ACATCCTCCTCGTTTCCCGTACTGCATCCAAGCTTGATACCCTTTCCAAT
GAAATCACAACCAAGTTCCCCTCCGTGCAGACCAAGACCTTGGCGATGGA
CTTCGCCCGCAACCAGGACAGCGACTACGAGAAGCTGAAGGAATTGGTGG
ATGAATTGGACGTGTCCGTCCTGGTCAACAACGTTGGAAAGAGTCACAGC
ATCCCCACTCCCTTCGCTCTGACCCCCGAGGATGAGATGACTGATATCGT
GACCATCAACTGCCTGGGTACCTTGCGGGCCACCCAGCTGGTCGTTCCGG
GTATGATGCAGCGCAAGCGCGGATTGGTCTTGACTATGGGCTCGTTCGGT
GGACTTCTCCCCACTCCTCTTCTTGCTACCTACTCCGGCAGCAAGGCTTT
CCTGCAGCAATGGTCCACTTCCCTTGGTTCGGAGCTCGAGCCTTACGGAA
TTACTGTCGAGTTGGTCCAGGCCTACCTTATCACCTCTGCTATGTCCAAG
ATCCGCCGGACCAGTGCTACGATCCCCGACCCCCGCTCATTCGTGAAGTC
GGTCCTGACTAAGATTGGCCGCAACGGCGGATCTCCCACGTACGCGTACA
GCTCTTCCCCTTACTGGAGCCACGGATTGATGGCCTGGTTCTTGACCTGC
GTCACTGGTACCATGGGCAAGATTGTCGTTAGCCAGAACAAGGGCATGCA
CGAGTCTATCCGGAAGCGTGCTCTGCGCAAGGCCGAGCGCGAGAAGGGCA
AGAAGAGCACCTAAATGGACTTTCTGACAAAACATCTGGACTGCCTGTCC
AACTGGCAGTTGAACCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGC
TCTTCTCGCCGCTGGCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCG
TCAGGGTCCTCCTGAGCTTGTTCGTGCTCCCTGGCAAGCCCCTCCGCTCC
TTCGGCCCTAAGGGCAGCTGGGCCGTGGTCACAGGTGCCTCCGATGGACT
CGGCAAGGAATTCGCTCTTCAGCTCGCCCGCGCTGACTTCAACATCCTCC
TCGTTTCCCGTACTGCATCCAAGCTTGATACCCTTTCCAATGAAATCACA
ACCAAGTTCCCCTCCGTGCAGACCAAGACCTTGGCGATGGACTTCGCCCG
CAACCAGGACAGCGACTACGAGAAGCTGAAGGAATTGGTGGATGAATTGG
ACGTGTCCGTCCTGGTCAACAACGTTGGAAAGAGTCACAGCATCCCCACT
CCCTTCGCTCTGACCCCCGAGGATGAGATGACTGATATCGTGACCATCAA
CTGCCTGGGTACCTTGCGGGCCACCCAGCTGGTCGTTCCGGGTATGATGC
AGCGCAAGCGCGGATTGGTCTTGACTATGGGCTCGTTCGGTGGACTTCTC
CCCACTCCTCTTCTTGCTACCTACTCCGGCAGCAAGGCTTTCCTGCAGCA
ATGGTCCACTTCCCTTGGTTCGGAGCTCGAGCCTTACGGAATTACTGTCG
AGTTGGTCCAGGCCTACCTTATCACCTCTGCTATGTCCAAGATCCGCCGG
ACCAGTGCTACGATCCCCGACCCCCGCTCATTCGTGAAGTCGGTCCTGAC
TAAGATTGGCCGCAACGGCGGATCTCCCACGTACGCGTACAGCTCTTCCC
CTTACTGGAGCCACGGATTGATGGCCTGGTTCTTGACCTGCGTCACTGGT
ACCATGGGCAAGATTGTCGTTAGCCAGAACAAGGGCATGCACGAGTCTAT
CCGGAAGCGTGCTCTGCGCAAGGCCGAGCGCGAGAAGGGCAAGAAGAGCA
CCTAAATGGACTTTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAG
TTGAACCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGC
CGCTGGCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCC
TCCTGAGCTTGTTCGTGCTCCCTGGCAAGCCC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0030497fatty acid elongation
Vocabulary: Molecular Function
TermDefinition
GO:0045703ketoreductase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52186ASPNIDRAFT_52186Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52186-T1ASPNIDRAFT_52186-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52186-T1.cdsASPNIDRAFT_52186-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52186-T1.exon2ASPNIDRAFT_52186-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52186-T1.exon1ASPNIDRAFT_52186-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG0926310O
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR027533
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productbeta-keto-reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:926588..927686 -
Powered by Drupal