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ASPNIDRAFT_52215-T1, ASPNIDRAFT_52215-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52215-T1
Unique NameASPNIDRAFT_52215-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1226594..1228470+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52215-T1 ID=ASPNIDRAFT_52215-T1|Name=ASPNIDRAFT_52215-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1877bp|location=Sequence derived from alignment at ACJE01000010.1:1226594..1228470+ (Aspergillus niger ATCC 1015)
ATTGTTACAAGCCCATGAGGTGATTGTGCACTAGATTTATGACTTCTTAC
GACATAGCTACTGTAACGTTGCCCCGAAACTTACTCCTTCCGGCCGTTGA
ACGGCACTGCCCTGAACCACTACACTCTTCTGCTTTATCGGGCATTATTG
GGCCATTCTGTCAGGCTATCACGCCAGCATTCCTCCTTTCATTATAATTT
CCAATCAGCGCCAATTACGCCGACCCCTTTTTCAGAATGTCAGCATCGGC
GTCATTATCGGCCGGCAGTGATGCGTCTGGCCCCGGTTCGCCAGCAGGAG
ACCAGGGCAACGCCCTGCCTCAGTTAGATTCTCTCATTTCTCACCTGGTG
GCAGCAAAACGGTCTCTGTCATCCATCAATCACGTGTGGCGTGCGAATGA
AATTGTAACTTCCGCTCGCTCTGCATTGGAAGAAAGTGTCGTGATTTCCG
CACGGACTGGCTTTCTCCGACGCGGGCTTAACAATCAACTACGGCTCCTT
TACAGTGTACGCTCTGAGGTCGAGGAAGTTTCACTCAGGGGCCGGTCGGA
GTTCGCCAGTGTTTTGAAAAGTCTAGACACTGCCGATGCCCGACTGAGGA
AGACCCTCGACTCCTTACGGGATACAATTGTTCACGCTTCATTTCGTCCC
GAGGGCGAAGAACCCAGAAGCTTACATGACTTTGTGGATGAACGTGGAGT
TGAGGAGCTTCGTGCAGCTTTGAAGAGCTCAATTGATCGTACCAATGAGG
CGCAGGCGGAACTGGATACATCCAATTCCGCGTTCGATGATGAGCTCCAG
TCCATCAAGCAAGCTCTGGGTAATTACCGAGAAGCTACCAAGTTAGCTTC
CTCATCCTCCTCTTCTTCATCCGCGTCTAATTCAAGCCTGCCGTCATTGT
CATCAATGCCACCCATGTTACAGTCATTGGAGATGCATGCGCAGGAAATG
GCCAATCTGCTAGAGTCCTTGGTCCAGCACTTTGATCTTTGTGTAACTGC
TGTCAAGCATACGGAAGGCGGTGGAGCTGCCGCGCGATCTATTACTGGGG
ATATGCCCGCTGCCGTCACTGTCAGTGGCCGTGGAGTACCGAATATCGAG
CAAGGCATTCATGACAACCTAAACGCCCCACTTGATCCCTTGAGTGAGTC
TGACTACCAAGAGATGGTGAATGTTTTGATCAAGGATGCAGCAGAGGCCG
AAGACGTGGTCATGGAAATCCAAGATCGTATCGGCGATATGGAATCAATT
CTTGAGAACATTTTGTCTCAACGTGATGTTCTTCTCTCCATCTACAATGC
CACTATTGGCGTCTTCCGACACCTTTCATCTCTTGCAACTGCGCGTCTAC
CGGGTTATATTGCTCAGGCACACAGCTTCACTCGTGTGTGGGGCGAAGAG
CACGATCGTATTAACGGTGGGCTAGCGGACTTGTCGGATCTTAATACCCT
TTACGACGGGTTTTTAGAAGCCTATGATGGCTTGATCCTCGAAGTGGCAC
GCCGACGGCACGTACGACAGCGTGTGGAAAAGGTCCTTCGTGAAACGAAA
CACAAATTGGATCAGCTGTACGAAGAGGATGTCAATGCTCGCGAAACGTT
CCGAGTCGAGCAAGGGGACTATTTGCCATCCGACATTTGGCCTGGTATCG
GCCGCGAGCCGATGCGAATAGAATTTCGACGCATATCCGGCGGTATTCTC
AAGGGAGCGCCTCCCGAACAGCCGGATGCACAAGACCAGCCGGCCGCTGA
ACCCAATGAACCCCAGTCAGGGCCCTCTGAAACGACGGAGGAAGGGGAAA
TTATCCCACATTTACCGAAATCGCTGGTTGAAGAGGCCCTCCATCGCCTC
AAGGCGAGGAATAGACAAGCCATGTAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:1226594..1228470+

>ASPNIDRAFT_52215-T1 ID=ASPNIDRAFT_52215-T1|Name=ASPNIDRAFT_52215-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1641bp|location=Sequence derived from alignment at ACJE01000010.1:1226594..1228470+ (Aspergillus niger ATCC 1015)
ATGTCAGCATCGGCGTCATTATCGGCCGGCAGTGATGCGTCTGGCCCCGG
TTCGCCAGCAGGAGACCAGGGCAACGCCCTGCCTCAGTTAGATTCTCTCA
TTTCTCACCTGGTGGCAGCAAAACGGTCTCTGTCATCCATCAATCACGTG
TGGCGTGCGAATGAAATTGTAACTTCCGCTCGCTCTGCATTGGAAGAAAG
TGTCGTGATTTCCGCACGGACTGGCTTTCTCCGACGCGGGCTTAACAATC
AACTACGGCTCCTTTACAGTGTACGCTCTGAGGTCGAGGAAGTTTCACTC
AGGGGCCGGTCGGAGTTCGCCAGTGTTTTGAAAAGTCTAGACACTGCCGA
TGCCCGACTGAGGAAGACCCTCGACTCCTTACGGGATACAATTGTTCACG
CTTCATTTCGTCCCGAGGGCGAAGAACCCAGAAGCTTACATGACTTTGTG
GATGAACGTGGAGTTGAGGAGCTTCGTGCAGCTTTGAAGAGCTCAATTGA
TCGTACCAATGAGGCGCAGGCGGAACTGGATACATCCAATTCCGCGTTCG
ATGATGAGCTCCAGTCCATCAAGCAAGCTCTGGGTAATTACCGAGAAGCT
ACCAAGTTAGCTTCCTCATCCTCCTCTTCTTCATCCGCGTCTAATTCAAG
CCTGCCGTCATTGTCATCAATGCCACCCATGTTACAGTCATTGGAGATGC
ATGCGCAGGAAATGGCCAATCTGCTAGAGTCCTTGGTCCAGCACTTTGAT
CTTTGTGTAACTGCTGTCAAGCATACGGAAGGCGGTGGAGCTGCCGCGCG
ATCTATTACTGGGGATATGCCCGCTGCCGTCACTGTCAGTGGCCGTGGAG
TACCGAATATCGAGCAAGGCATTCATGACAACCTAAACGCCCCACTTGAT
CCCTTGAGTGAGTCTGACTACCAAGAGATGGTGAATGTTTTGATCAAGGA
TGCAGCAGAGGCCGAAGACGTGGTCATGGAAATCCAAGATCGTATCGGCG
ATATGGAATCAATTCTTGAGAACATTTTGTCTCAACGTGATGTTCTTCTC
TCCATCTACAATGCCACTATTGGCGTCTTCCGACACCTTTCATCTCTTGC
AACTGCGCGTCTACCGGGTTATATTGCTCAGGCACACAGCTTCACTCGTG
TGTGGGGCGAAGAGCACGATCGTATTAACGGTGGGCTAGCGGACTTGTCG
GATCTTAATACCCTTTACGACGGGTTTTTAGAAGCCTATGATGGCTTGAT
CCTCGAAGTGGCACGCCGACGGCACGTACGACAGCGTGTGGAAAAGGTCC
TTCGTGAAACGAAACACAAATTGGATCAGCTGTACGAAGAGGATGTCAAT
GCTCGCGAAACGTTCCGAGTCGAGCAAGGGGACTATTTGCCATCCGACAT
TTGGCCTGGTATCGGCCGCGAGCCGATGCGAATAGAATTTCGACGCATAT
CCGGCGGTATTCTCAAGGGAGCGCCTCCCGAACAGCCGGATGCACAAGAC
CAGCCGGCCGCTGAACCCAATGAACCCCAGTCAGGGCCCTCTGAAACGAC
GGAGGAAGGGGAAATTATCCCACATTTACCGAAATCGCTGGTTGAAGAGG
CCCTCCATCGCCTCAAGGCGAGGAATAGACAAGCCATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG17ASPNIDRAFT_52215Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52215-T1.utr5p1ASPNIDRAFT_52215-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52215-T1.exon1ASPNIDRAFT_52215-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52215-T1.cdsASPNIDRAFT_52215-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52215-T1ASPNIDRAFT_52215-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007240
DBxrefPFAM:PF04108
Productautophagy protein 17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1226594..1228470 +
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