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ASPNIDRAFT_52270-T1, ASPNIDRAFT_52270-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52270-T1
Unique NameASPNIDRAFT_52270-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1642036..1643014+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52270-T1 ID=ASPNIDRAFT_52270-T1|Name=ASPNIDRAFT_52270-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=979bp|location=Sequence derived from alignment at ACJE01000010.1:1642036..1643014+ (Aspergillus niger ATCC 1015)
CATTCGTTCTTCGGTTCACGGAGTCCTTCTGTTCAGAGTCGAGTGCATTT
ATTATCTTCTTCTACTTCTTCTTTGTATAGTACAGCTACAGCTACAGCTA
CAGCCGCCACAATGAGCCGCCCCGACATTACCCTGTACACTGCGCAGACT
CCCAATGGGATTAAGATTTCCATTGCGCTGGAGGAGCTTGGGTATGCCAA
ACATACACCTTCCTGGGATAATCGGCAATTGACTAAAGCGATAATCCAGT
CTGCCCTACAAAGTCGAGAAGATTGACATCTCCAAGAACACCCAGAAAGA
GCCGTATGCTCCCTAACCCCCTTCCTCACATCAACTCACCACCACTAACC
ACCAACACAGATGGTTCCTCGAAATCAACCCCAACGGCCGCATCCCCGCC
TTAACCGACACCTTCACGGATGGGTCCAAGATCCGGCTTTTCGAATCCGG
CAGCATCCTCACCTACCTGGCGGAACAATACGACAAAGACCACAAGATCT
CCTACCCCCAGGGAACCCGCGAATACTACGAACAGAACAGCTGGCTCTAC
TTCCAGAACGCCGGTGTCGGGCCCATGCAAGGCCAAGCGAACCACTTCCA
CCGGTACGCGCCCGAGCGCATCGAGTACGGCGTGAACCGCTACATCAACG
AGACACGACGTCTATACAGTGTGCTGGATGCGCACCTCGCCAAGTCGAAG
TCTGGGTATCTTGTTGGTGATCACGTCAGTATTGCGGATATTTCGCATTG
GGGATGGGTTGCGGCGGCCGGGTGGGCGGGAGTTGATATTGAGGAGTTCC
CGAATCTGAAGGCGTGGGAGGAGCGCATGGCTGCTAGGGAGGGCGTTGAG
AAGGGTAGGCATGTGCCGAGTCCGCATACTATTAAGGAGCTCTTGAAGGA
TAAGGCCAAGGCGGAGAAGATTGCGGAGGAGTCGAAGGGGTGGATTCAGC
AGGGGATGAAGGCGGATGCTAAGCATTAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:1642036..1643014+

>ASPNIDRAFT_52270-T1 ID=ASPNIDRAFT_52270-T1|Name=ASPNIDRAFT_52270-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2259bp|location=Sequence derived from alignment at ACJE01000010.1:1642036..1643014+ (Aspergillus niger ATCC 1015)
ATGAGCCGCCCCGACATTACCCTGTACACTGCGCAGACTCCCAATGGGAT
TAAGATTTCCATTGCGCTGGAGGAGCTTGGTCTGCCCTACAAAGTCGAGA
AGATTGACATCTCCAAGAACACCCAGAAAGAGCCATGGTTCCTCGAAATC
AACCCCAACGGCCGCATCCCCGCCTTAACCGACACCTTCACGGATGGGTC
CAAGATCCGGCTTTTCGAATCCGGCAGCATCCTCACCTACCTGGCGGAAC
AATACGACAAAGACCACAAGATCTCCTACCCCCAGGGAACCCGCGAATAC
TACGAACAGAACAGCTGGCTCTACTTCCAGAACGCCGGTGTCGGGCCCAT
GCAAGGCCAAGCGAACCACTTCCACCGGTACGCGCCCGAGCGCATCGAGT
ACGGCGTGAACCGCTACATCAACGAGACACGACGTCTATACAGTGTGCTG
GATGCGCACCTCGCCAAGTCGAAGTCTGGGTATCTTGTTGGTGATCACGT
CAGTATTGCGGATATTTCGCATTGGGGATGGGTTGCGGCGGCCGGGTGGG
CGGGAGTTGATATTGAGGAGTTCCCGAATCTGAAGGCGTGGGAGGAGCGC
ATGGCTGCTAGGGAGGGCGTTGAGAAGGGTAGGCATGTGCCGAGTCCGCA
TACTATTAAGGAGCTCTTGAAGGATAAGGCCAAGGCGGAGAAGATTGCGG
AGGAGTCGAAGGGGTGGATTCAGCAGGGGATGAAGGCGGATGCTAAGCAT
TAGATGAGCCGCCCCGACATTACCCTGTACACTGCGCAGACTCCCAATGG
GATTAAGATTTCCATTGCGCTGGAGGAGCTTGGTCTGCCCTACAAAGTCG
AGAAGATTGACATCTCCAAGAACACCCAGAAAGAGCCATGGTTCCTCGAA
ATCAACCCCAACGGCCGCATCCCCGCCTTAACCGACACCTTCACGGATGG
GTCCAAGATCCGGCTTTTCGAATCCGGCAGCATCCTCACCTACCTGGCGG
AACAATACGACAAAGACCACAAGATCTCCTACCCCCAGGGAACCCGCGAA
TACTACGAACAGAACAGCTGGCTCTACTTCCAGAACGCCGGTGTCGGGCC
CATGCAAGGCCAAGCGAACCACTTCCACCGGTACGCGCCCGAGCGCATCG
AGTACGGCGTGAACCGCTACATCAACGAGACACGACGTCTATACAGTGTG
CTGGATGCGCACCTCGCCAAGTCGAAGTCTGGGTATCTTGTTGGTGATCA
CGTCAGTATTGCGGATATTTCGCATTGGGGATGGGTTGCGGCGGCCGGGT
GGGCGGGAGTTGATATTGAGGAGTTCCCGAATCTGAAGGCGTGGGAGGAG
CGCATGGCTGCTAGGGAGGGCGTTGAGAAGGGTAGGCATGTGCCGAGTCC
GCATACTATTAAGGAGCTCTTGAAGGATAAGGCCAAGGCGGAGAAGATTG
CGGAGGAGTCGAAGGGGTGGATTCAGCAGGGGATGAAGGCGGATGCTAAG
CATTAGATGAGCCGCCCCGACATTACCCTGTACACTGCGCAGACTCCCAA
TGGGATTAAGATTTCCATTGCGCTGGAGGAGCTTGGTCTGCCCTACAAAG
TCGAGAAGATTGACATCTCCAAGAACACCCAGAAAGAGCCATGGTTCCTC
GAAATCAACCCCAACGGCCGCATCCCCGCCTTAACCGACACCTTCACGGA
TGGGTCCAAGATCCGGCTTTTCGAATCCGGCAGCATCCTCACCTACCTGG
CGGAACAATACGACAAAGACCACAAGATCTCCTACCCCCAGGGAACCCGC
GAATACTACGAACAGAACAGCTGGCTCTACTTCCAGAACGCCGGTGTCGG
GCCCATGCAAGGCCAAGCGAACCACTTCCACCGGTACGCGCCCGAGCGCA
TCGAGTACGGCGTGAACCGCTACATCAACGAGACACGACGTCTATACAGT
GTGCTGGATGCGCACCTCGCCAAGTCGAAGTCTGGGTATCTTGTTGGTGA
TCACGTCAGTATTGCGGATATTTCGCATTGGGGATGGGTTGCGGCGGCCG
GGTGGGCGGGAGTTGATATTGAGGAGTTCCCGAATCTGAAGGCGTGGGAG
GAGCGCATGGCTGCTAGGGAGGGCGTTGAGAAGGGTAGGCATGTGCCGAG
TCCGCATACTATTAAGGAGCTCTTGAAGGATAAGGCCAAGGCGGAGAAGA
TTGCGGAGGAGTCGAAGGGGTGGATTCAGCAGGGGATGAAGGCGGATGCT
AAGCATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52270ASPNIDRAFT_52270Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52270-T1.utr5p1ASPNIDRAFT_52270-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52270-T1.exon1ASPNIDRAFT_52270-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52270-T1.exon2ASPNIDRAFT_52270-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52270-T1.exon3ASPNIDRAFT_52270-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52270-T1.cdsASPNIDRAFT_52270-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52270-T1ASPNIDRAFT_52270-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1642036..1643014 +
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