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ASPNIDRAFT_52477-T1, ASPNIDRAFT_52477-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52477-T1
Unique NameASPNIDRAFT_52477-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3571467..3572777+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52477-T1 ID=ASPNIDRAFT_52477-T1|Name=ASPNIDRAFT_52477-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1311bp|location=Sequence derived from alignment at ACJE01000010.1:3571467..3572777+ (Aspergillus niger ATCC 1015)
CTCATTCTCTCCCTCCCTCCCTCCCTCTCTCTCTCAGAACACCCAATCGG
TCTTCCCCCCTCACTCGTCTCCTCCCTCCCCCTGGTTCACCGCATCTCCT
GCTTCTCCTGTCCTCCTTTCGGCTTCCGACAGACGACCTTCCGTGATTCT
CTGCACCTTCTCTCCCGCAAACTTCACGGTTCTTCAAAGTTTACAACATG
GTTGTGGCAACAATTAAGTGCGTTGTTCTCATCATCTTTATCCCTTTCTC
TCCGCAATCACTTTTCCCCCTCCTCTCTTTCCCCTCCCCCCATTTGAATA
CACCCCCCCTCTATCCTGTCCCTTCCTTCCCCTTTCTCCGTGCAAACCGA
ACACATTCATTCTTTCTTTCTTTCTTGGAGCGGCAGGTTGCTAACCATAG
TTTGACTTTTGTCGCAGATGCGTTGTCGTCGGTGACGGTGCCGTTGGCAA
GACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAATATG
TTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATGTAAGTTAGGGAT
CTCCTATCATTGAACACGATTTACATATCGGGACTCTGTCGGAGTGCGCT
ATATCACACTGCCAATAGCGTTATTGGTGCAACCCAATGTCGCTGGCTCG
ACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACTGACTCG
AATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGGATTGTT
TGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGTATC
CTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCTCC
TTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTGCCC
CGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACGATC
CCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGCAAA
GAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGTGGA
GTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGGTTA
GTGTCGCGCCACATCCCGCGTCGTCGCATCTACTCACACATGTCGATTCT
AGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGTGC
GTCCTGCTGTAATTGATCCCGGGATCTTACAGGGCAGGCCCGTACGCTCC
GGAGGGTTCTAGGCCTGTCATTGATGCATCGCAGACACGTCGTATGATTT
TGGGAGACTGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:3571467..3572777+

>ASPNIDRAFT_52477-T1 ID=ASPNIDRAFT_52477-T1|Name=ASPNIDRAFT_52477-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3705bp|location=Sequence derived from alignment at ACJE01000010.1:3571467..3572777+ (Aspergillus niger ATCC 1015)
ATGGTTGTGGCAACAATTAAGTGCGTTGTCGTCGGTGACGGTGCCGTTGG
CAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAAT
ATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATCGTTATTGGT
GCAACCCAATGTCGCTGGCTCGACGAATGCGATGGCGTCTGTGGACAAAT
ATCGGAATCTGGAACTGACTCGAATCCGTTGCGCAATAGGATTGGCGATG
AGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAGGATTACGAT
CGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCTCGTTTGCTT
TTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCC
CCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACC
CAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCA
GAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGGCCAAGGAGC
TGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTC
AAGGACGTCTTTGACGAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAA
GAAGTCGAAGAAGGCAGGCCCGTACGCTCCGGAGGGTTCTAGGCCTGTCA
TTGATGCATCGCAGACACGTCGTATGATTTTGGGAGACTGAATGGTTGTG
GCAACAATTAAGTGCGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTG
CCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAATATGTTCCCA
CGGTGTTTGATAACTATGCCGTCACAGTCATCGTTATTGGTGCAACCCAA
TGTCGCTGGCTCGACGAATGCGATGGCGTCTGTGGACAAATATCGGAATC
TGGAACTGACTCGAATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACA
CTCTGGGATTGTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGT
CCTCTTTCGTATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCAC
TTCGCCTGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGC
ACCACCACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGAT
CTTCGCGACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCA
ACCGATTCGCAAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAG
TGAAATACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTC
TTTGACGAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAA
GAAGGCAGGCCCGTACGCTCCGGAGGGTTCTAGGCCTGTCATTGATGCAT
CGCAGACACGTCGTATGATTTTGGGAGACTGAATGGTTGTGGCAACAATT
AAGTGCGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTGAT
CTCTTACACGACGAACAAGTTCCCTTCCGAATATGTTCCCACGGTGTTTG
ATAACTATGCCGTCACAGTCATCGTTATTGGTGCAACCCAATGTCGCTGG
CTCGACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACTGA
CTCGAATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGGAT
TGTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCG
TATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGC
CTCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACT
GCCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGAC
GATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCG
CAAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACG
TGGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAG
GCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGGCAGG
CCCGTACGCTCCGGAGGGTTCTAGGCCTGTCATTGATGCATCGCAGACAC
GTCGTATGATTTTGGGAGACTGAATGGTTGTGGCAACAATTAAGTGCGTT
GTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTGATCTCTTACAC
GACGAACAAGTTCCCTTCCGAATATGTTCCCACGGTGTTTGATAACTATG
CCGTCACAGTCATCGTTATTGGTGCAACCCAATGTCGCTGGCTCGACGAA
TGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACTGACTCGAATCC
GTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGGATTGTTTGATA
CTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGTATCCTCAG
ACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCTCCTTTGA
GAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTGCCCCGGTG
TCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACGATCCCGCT
GTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGCAAAGAAGA
TGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGTGGAGTGTT
CTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGGCGATTGTT
GCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGGCAGGCCCGTACGC
TCCGGAGGGTTCTAGGCCTGTCATTGATGCATCGCAGACACGTCGTATGA
TTTTGGGAGACTGAATGGTTGTGGCAACAATTAAGTGCGTTGTCGTCGGT
GACGGTGCCGTTGGCAAGACCTGCCTTTTGATCTCTTACACGACGAACAA
GTTCCCTTCCGAATATGTTCCCACGGTGTTTGATAACTATGCCGTCACAG
TCATCGTTATTGGTGCAACCCAATGTCGCTGGCTCGACGAATGCGATGGC
GTCTGTGGACAAATATCGGAATCTGGAACTGACTCGAATCCGTTGCGCAA
TAGGATTGGCGATGAGCCCTACACTCTGGGATTGTTTGATACTGCTGGTC
AGGAGGATTACGATCGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTC
TTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACG
CGAAAAGTGGTTCCCCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCC
TGATCGTGGGCACCCAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAG
AAGCTTGCCCGCCAGAAGATGCAACCGATTCGCAAAGAAGATGGAGACCG
TATGGCCAAGGAGCTGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCA
CGCAGTACAAGCTCAAGGACGTCTTTGACGAGGCGATTGTTGCCGCGCTC
GAGCCCGCTCCTAAGAAGTCGAAGAAGGCAGGCCCGTACGCTCCGGAGGG
TTCTAGGCCTGTCATTGATGCATCGCAGACACGTCGTATGATTTTGGGAG
ACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDC42ASPNIDRAFT_52477Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52477-T1ASPNIDRAFT_52477-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52477-T1.utr5p1ASPNIDRAFT_52477-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52477-T1.exon1ASPNIDRAFT_52477-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52477-T1.exon2ASPNIDRAFT_52477-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52477-T1.exon3ASPNIDRAFT_52477-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52477-T1.exon4ASPNIDRAFT_52477-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52477-T1.exon5ASPNIDRAFT_52477-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52477-T1.cdsASPNIDRAFT_52477-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR037874
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
ProductRho GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3571467..3572777 +
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