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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:2826473..2827564+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52535-T1 ID=ASPNIDRAFT_52535-T1|Name=ASPNIDRAFT_52535-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1092bp|location=Sequence derived from alignment at ACJE01000021.1:2826473..2827564+ (Aspergillus niger ATCC 1015)
CTTCCACATTCACACCGATACACGAACACTACTAAGACCACCGAAACCAG
AGGAAATCCCATCACCATGAGCCTCACTTGCACGCACGTCACACCGGAAT
GTCCCGTCACGGCGACAACATATGGCTACTACCCCAACCTAGGCGGTAAT
ATCTTTTTCGCCGTCTACTTTGGCCTACTCGGCACCCTCCAACTTGGTCT
CGGCGTCTACTACCGCTCCTGGACCATGTTGATAGCGATGGTAATCGGCG
GGTACATGGAACTAGCGGGATACATCGGCCGAATCTTAATGAACCATAAT
CCCTGGGACCAAGGCGGCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGC
CCCGACCTTCATCGCCGCCGGTATCTATCTCACCCTGAAGCACGTCATCC
TCTCCTTGGGCCCGGAACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGG
ATCTTTATCAGCTGTGATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGG
TGGTGTTGCCGCTGCAGCGGGCAGCGAGAATCAGAATTTGCTGAAGGTGG
GCGATGATATCATGGTGGCGGGTATCGCCTTCCAGGTGGGCACGATGTCA
GTTTGTGGTCTGTTGGCGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGG
ACCTGGTTTGGGCGGCGAGAAGTATATTGATGAGAATGGGAATCTCACTG
GGCCGAAGCACCTCAGGGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTT
GCTACTTTGATCCGGTGTATTTATCGGTAAGTCCCTCTCTACTTCCACGC
TCTCAAGCTATGGACGATACGATGTACTAACATAGTTTACCGTGGGTAGT
ATTCCCGAAATGGCCGGTGGATGGGGTAACCCGCTCATGCAGAAAGAGAA
TGAATTTTTGGTTTTGGATGGAATGTGAGCATTCCTTTTGATCATGTTTT
CCGTTCTATGTTGTGAATCCAGACGTACTGATTGGAGTTATTTAGGATGA
TGGCCATCGCCGTGAGCTGCCTTACCTACCTCTACCCTGGATTCTTCCTG
CAATCTATCCGGAAGGGTATGAAGAAGACTCCGAAAGCCTAG back to topCoding sequence (CDS) from alignment at ACJE01000021.1:2826473..2827564+ >ASPNIDRAFT_52535-T1 ID=ASPNIDRAFT_52535-T1|Name=ASPNIDRAFT_52535-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2646bp|location=Sequence derived from alignment at ACJE01000021.1:2826473..2827564+ (Aspergillus niger ATCC 1015)
ATGAGCCTCACTTGCACGCACGTCACACCGGAATGTCCCGTCACGGCGAC
AACATATGGCTACTACCCCAACCTAGGCGGTAATATCTTTTTCGCCGTCT
ACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCGGCGTCTACTACCGC
TCCTGGACCATGTTGATAGCGATGGTAATCGGCGGGTACATGGAACTAGC
GGGATACATCGGCCGAATCTTAATGAACCATAATCCCTGGGACCAAGGCG
GCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCCCGACCTTCATCGCC
GCCGGTATCTATCTCACCCTGAAGCACGTCATCCTCTCCTTGGGCCCGGA
ACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGATCTTTATCAGCTGTG
ATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCA
GCGGGCAGCGAGAATCAGAATTTGCTGAAGGTGGGCGATGATATCATGGT
GGCGGGTATCGCCTTCCAGGTGGGCACGATGTCAGTTTGTGGTCTGTTGG
CGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGACCTGGTTTGGGCGGC
GAGAAGTATATTGATGAGAATGGGAATCTCACTGGGCCGAAGCACCTCAG
GGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGCTACTTTGATCCGGT
GTATTTATCGTATTCCCGAAATGGCCGGTGGATGGGGTAACCCGCTCATG
CAGAAAGAGAATGAATTTTTGGTTTTGGATGGAATGATGATGGCCATCGC
CGTGAGCTGCCTTACCTACCTCTACCCTGGATTCTTCCTGCAATCTATCC
GGAAGGGTATGAAGAAGACTCCGAAAGCCTAGATGAGCCTCACTTGCACG
CACGTCACACCGGAATGTCCCGTCACGGCGACAACATATGGCTACTACCC
CAACCTAGGCGGTAATATCTTTTTCGCCGTCTACTTTGGCCTACTCGGCA
CCCTCCAACTTGGTCTCGGCGTCTACTACCGCTCCTGGACCATGTTGATA
GCGATGGTAATCGGCGGGTACATGGAACTAGCGGGATACATCGGCCGAAT
CTTAATGAACCATAATCCCTGGGACCAAGGCGGCTTCAAACTGCAAATTG
TCTGTCTCGTGCTCGCCCCGACCTTCATCGCCGCCGGTATCTATCTCACC
CTGAAGCACGTCATCCTCTCCTTGGGCCCGGAACACTCGCGTCTCAAGCC
CCGGCTCTTTACCTGGATCTTTATCAGCTGTGATGTCGGATCGCTCATTC
TCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCAGCGGGCAGCGAGAATCAG
AATTTGCTGAAGGTGGGCGATGATATCATGGTGGCGGGTATCGCCTTCCA
GGTGGGCACGATGTCAGTTTGTGGTCTGTTGGCGCTGGATTTCTTTATCC
GCGTTGTGAGAAAGGGACCTGGTTTGGGCGGCGAGAAGTATATTGATGAG
AATGGGAATCTCACTGGGCCGAAGCACCTCAGGGTTGTTGTTTGGGCGGG
CATCGTGGCTTACTTTGCTACTTTGATCCGGTGTATTTATCGTATTCCCG
AAATGGCCGGTGGATGGGGTAACCCGCTCATGCAGAAAGAGAATGAATTT
TTGGTTTTGGATGGAATGATGATGGCCATCGCCGTGAGCTGCCTTACCTA
CCTCTACCCTGGATTCTTCCTGCAATCTATCCGGAAGGGTATGAAGAAGA
CTCCGAAAGCCTAGATGAGCCTCACTTGCACGCACGTCACACCGGAATGT
CCCGTCACGGCGACAACATATGGCTACTACCCCAACCTAGGCGGTAATAT
CTTTTTCGCCGTCTACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCG
GCGTCTACTACCGCTCCTGGACCATGTTGATAGCGATGGTAATCGGCGGG
TACATGGAACTAGCGGGATACATCGGCCGAATCTTAATGAACCATAATCC
CTGGGACCAAGGCGGCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCC
CGACCTTCATCGCCGCCGGTATCTATCTCACCCTGAAGCACGTCATCCTC
TCCTTGGGCCCGGAACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGAT
CTTTATCAGCTGTGATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTG
GTGTTGCCGCTGCAGCGGGCAGCGAGAATCAGAATTTGCTGAAGGTGGGC
GATGATATCATGGTGGCGGGTATCGCCTTCCAGGTGGGCACGATGTCAGT
TTGTGGTCTGTTGGCGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGAC
CTGGTTTGGGCGGCGAGAAGTATATTGATGAGAATGGGAATCTCACTGGG
CCGAAGCACCTCAGGGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGC
TACTTTGATCCGGTGTATTTATCGTATTCCCGAAATGGCCGGTGGATGGG
GTAACCCGCTCATGCAGAAAGAGAATGAATTTTTGGTTTTGGATGGAATG
ATGATGGCCATCGCCGTGAGCTGCCTTACCTACCTCTACCCTGGATTCTT
CCTGCAATCTATCCGGAAGGGTATGAAGAAGACTCCGAAAGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:2826473..2827564 + |
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