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ASPNIDRAFT_52637-T1, ASPNIDRAFT_52637-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52637-T1
Unique NameASPNIDRAFT_52637-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1663408..1664412+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52637-T1 ID=ASPNIDRAFT_52637-T1|Name=ASPNIDRAFT_52637-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1005bp|location=Sequence derived from alignment at ACJE01000021.1:1663408..1664412+ (Aspergillus niger ATCC 1015)
CCCTTATCTATCAACCTCCATCAATCTTTCATCCTCAACGTCATCTTTCC
ATCTCTAAAACAACTAAATCCATCAAACTTAATCCACTAAGATGGCCCGC
ACTAAGCAGACTGCCCGTAAGTGCAACCTCACTGTCCTTTCCCCTCGTGT
CGTTCGACCGCGTCATGGTCGCGACACCCGTGTCTCACATGAGGAACATC
ATCACTAACTATCATCTCAATATAGGTAAGTCCACTGGTGGCAAGGCTCC
CCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGCTCCCTCCACCG
GAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTATGTATACACTCATC
ATTCAAAGTGGCAAATGGCCTATCCGAACAGTCAACTAACAGTCTACCAA
AGGTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGAGCACTGAGC
TCCTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAAATTGCTCAG
GACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGTGCTCTTCA
GGAGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACACCAACCTGT
GCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAGCTT
GCCCGCCGTCTCCGTGGTGAGCGCTCTTAGATTTACTTCTAATGAGTCGA
TTCTTTTTCTGGTTGGGAAGGCGATAACGGGGTTTCTTTTTCTTTAATTT
TCATGACTACTGGCGATACATGATGGGTTTGCGAATTTTAACGGGTTTCG
GCACTGGGTTTTCGTTATTTCTTGCTGCGCAATAAATAGTAGCTGCCGAT
TCAGCGGCTGGGTGGAATTGATCATGGGGATGCATCCGAATATGTACATT
AAAGAAAGCTTTTATTCGACGTGACTTCCTTCGGGAGCGCCACCGGATGG
CATAGACGCGAAATGCAGTATCTATGGAACAATCCAACCCGGTTTGAGAT
CGCGA
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Coding sequence (CDS) from alignment at ACJE01000021.1:1663408..1664412+

>ASPNIDRAFT_52637-T1 ID=ASPNIDRAFT_52637-T1|Name=ASPNIDRAFT_52637-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1233bp|location=Sequence derived from alignment at ACJE01000021.1:1663408..1664412+ (Aspergillus niger ATCC 1015)
ATGGCCCGCACTAAGCAGACTGCCCGTAAGTCCACTGGTGGCAAGGCTCC
CCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGCTCCCTCCACCG
GAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTACCGTCGCTCTGCGT
GAAATCCGTCGTTACCAGAAGAGCACTGAGCTCCTGATCCGCAAGCTGCC
CTTCCAGCGTCTTGTCCGTGAAATTGCTCAGGACTTCAAGTCGGATCTCC
GCTTCCAGTCCTCCGCCATCGGTGCTCTTCAGGAGTCCGTCGAGGCCTAC
CTCGTCTCCCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCG
TGTCACCATCCAGTCCAAGGACATCCAGCTTGCCCGCCGTCTCCGTGGTG
AGCGCTCTTAGATGGCCCGCACTAAGCAGACTGCCCGTAAGTCCACTGGT
GGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGC
TCCCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTACCG
TCGCTCTGCGTGAAATCCGTCGTTACCAGAAGAGCACTGAGCTCCTGATC
CGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAAATTGCTCAGGACTTCAA
GTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGTGCTCTTCAGGAGTCCG
TCGAGGCCTACCTCGTCTCCCTCTTCGAGGACACCAACCTGTGCGCCATC
CACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAGCTTGCCCGCCG
TCTCCGTGGTGAGCGCTCTTAGATGGCCCGCACTAAGCAGACTGCCCGTA
AGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCC
CGTAAGGCCGCTCCCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAA
GCCCGGTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGAGCACTG
AGCTCCTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAAATTGCT
CAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGTGCTCT
TCAGGAGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACACCAACC
TGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAG
CTTGCCCGCCGTCTCCGTGGTGAGCGCTCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HHT1ASPNIDRAFT_52637Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52637-T1ASPNIDRAFT_52637-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52637-T1.utr5p1ASPNIDRAFT_52637-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52637-T1.exon1ASPNIDRAFT_52637-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52637-T1.exon2ASPNIDRAFT_52637-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52637-T1.exon3ASPNIDRAFT_52637-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52637-T1.cdsASPNIDRAFT_52637-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52637-T1.utr3p1ASPNIDRAFT_52637-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007125
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR000164
DBxrefPFAM:PF00125
Producthistone H3.1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1663408..1664412 +
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