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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:1221580..1223783+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52691-T1 ID=ASPNIDRAFT_52691-T1|Name=ASPNIDRAFT_52691-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2204bp|location=Sequence derived from alignment at ACJE01000021.1:1221580..1223783+ (Aspergillus niger ATCC 1015) CTTTTCTATCTTGCGCGTCAATCGCGCACACTCCCCTGTCAGCATGGATA
TGAACCATTTAATAGGGTCAGTGTTCTATGCCACTACTGGTCTGAACCAG
GGTTTGTGCGGCTAGGCGGGAGTTAACACCTGGCAGTCAGCGTTTCAACC
TGATCTCCAAGAGTGACATTCGGTATGTTCGATCTTTCCCTCCCTTGGCT
TTTGGCCTTGGCTACAGCTGCTTCGTCATCGCACCTGGCTCCCCCCCGGA
TTATACTAATACTGACTTGACCTTGTCAGTTATGTTGGAACGTTGCATGA
GATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGTTGTCTCTTTCG
GGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCC
AGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTAAAAGACATTAG
CGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACCTCCTCAGGTGC
CGGATGATCCCGCCATCTTAGGGGTAAGTTTATCAACTCACAACTTCATT
CCAAACCTTGCCTGCCCTTTGAGTGCTTTGCGTCCACGGACTTGTTCCGT
ATGGACACTCGATCAAATGATGAAATATTTCGGATGTAAACTCACAGACC
TGTTCCGAATTGCGCAAACAATTCATGTGGATATTTTCCGTTGCCTTCCT
TCTGAATGATCGAGAAGCAAAGCACTCTTAATCTTGCCTTGTCACACATA
TTCTCTTTCTCAAGCCATGATACTAATTAAGTTTCATGAAAACAGAGTAT
GTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTC
AGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAA
GGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCC
TGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGT
TTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCC
CAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCG
ACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTG
AGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCT
ACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGA
ATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTG
CTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGT
GGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGT
TCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGC
AAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCT
GCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAA
GCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGG
AAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCC
CGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGT
TGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCA
ACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCAT
GAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATAC
CAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATA
ACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTG
GGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTT
CGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCA
GAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCT
CGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGG
CGTGCCTACCCAGACATAGGCGAACCCTCGTCTGACCATACTTATTCTTC
CATG back to topCoding sequence (CDS) from alignment at ACJE01000021.1:1221580..1223783+ >ASPNIDRAFT_52691-T1 ID=ASPNIDRAFT_52691-T1|Name=ASPNIDRAFT_52691-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6708bp|location=Sequence derived from alignment at ACJE01000021.1:1221580..1223783+ (Aspergillus niger ATCC 1015) ATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCAAGAG TGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCCTCCA CCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCGAGGC AATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATATTGT CTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACGAAGG AGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCATCTTA GGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGTCACA ACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAACCGC AGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCCCGGT TTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGCCACC AGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGCCAGT TCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCCTCCT CCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTAAACC CACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCCAGCC GGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCCGCCC CCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCAGTAT TCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACTGGAC CCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTCCAAG CCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGAGCAG TGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGTGCTG CCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAACGCG CCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGAGACA GATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGTCATC AGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACAGTCG AAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCAACGC CAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGGTCGC CTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGAAGCG CCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTTCTTT CTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACGGGAG GCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAATATC GAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACCGTGG CCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGACGTG GGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTCGCAA GCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAATAGG TCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGAACGT TGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGTTGTC TCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTGCCCC GTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTAAAAG ACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACCTCCT CAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGGGACC TACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGTCCGG CGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCCTCCA TATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTTTTCC TAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCGGGTC AAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTATTGGA CCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTACCTGG CGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTTGGTG ACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCCTGGA GTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCATCTGT AACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCTCCGA CTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCAGCCG GCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAAGCAA TCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCTCAGG CGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGCGGCT ATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATGGAGA AGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCGTATG AGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGGCGGT CACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTGATAC GGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGACCTGG TCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGACTGCT TCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATTCCGT GGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGCGAGG CTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGAATGG CGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTAGCGT TGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGCTATG GTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGGAGGC CTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCCAGAC ATAGATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCA AGAGTGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCC TCCACCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCG AGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATA TTGTCTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACG AAGGAGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCAT CTTAGGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGT CACAACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAA CCGCAGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCC CGGTTTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGC CACCAGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGC CAGTTCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCC TCCTCCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTA AACCCACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCC AGCCGGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCC GCCCCCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCA GTATTCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACT GGACCCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTC CAAGCCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGA GCAGTGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGT GCTGCCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAA CGCGCCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGA GACAGATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGT CATCAGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACA GTCGAAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCA ACGCCAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGG TCGCCTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGA AGCGCCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTT CTTTCTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACG GGAGGCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAA TATCGAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACC GTGGCCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGA CGTGGGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTC GCAAGCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAA TAGGTCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGA ACGTTGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGT TGTCTCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTG CCCCGTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTA AAAGACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACC TCCTCAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGG GACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGT CCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCC TCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTT TTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCG GGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTAT TGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTAC CTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTT GGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCC TGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCAT CTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCT CCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCA GCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAA GCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCT CAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGC GGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATG GAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCG TATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGG CGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTG ATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGAC CTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGAC TGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATT CCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGC GAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGA ATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTA GCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGC TATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGG AGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCC AGACATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR010920 |
DBxref | InterPro:IPR025762 |
DBxref | InterPro:IPR025768 |
DBxref | InterPro:IPR025761 |
DBxref | InterPro:IPR019050 |
DBxref | InterPro:IPR025609 |
DBxref | PFAM:PF12701 |
DBxref | PFAM:PF09532 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ACJE01000021.1 | supercontig | ACJE01000021.1:1221580..1223783 + |
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