You are here

Home

ASPNIDRAFT_52785-T1, ASPNIDRAFT_52785-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52785-T1
Unique NameASPNIDRAFT_52785-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:443436..444992-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52785-T1 ID=ASPNIDRAFT_52785-T1|Name=ASPNIDRAFT_52785-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1557bp|location=Sequence derived from alignment at ACJE01000021.1:443436..444992- (Aspergillus niger ATCC 1015)
ATGTCAAATGCGGAGGAGCTTTTGAGGGATTTCGAGGAGGACGACGAGGA
TCTTCAGGCTGGCGATGGCCTCGAAGAGGAAGCTGTCGATGAGGAGCAGC
TGGCACAAGCTCCTGAGGTTACTAACGAGTTTGACGTCGCCTTGTCGACC
GCCGACGAACTGACCCGTCTACACAAAGTGCTGCGCGATCACTACTCTAT
ACGGTTTCCTGAGCTCGAGACGCTCGTGACTACTCCGATCGACTATGCGA
AAACTGTCGCTATCCTAAAAAATGGCCCGCTCAACGATATTAAAGCTCTG
TCAACCTCGTCAGATAACATGGTTGGCGTGCCACTGAGGTCAATTTTGGA
TGGGCCATCCCTGATGGTTGTGGCCGTGGAGGGTACCACCACTCGAGGCC
GGGAGATGACCGAGGCCGAACTCAAGACCGTGATGGATACATGCGAACGG
ATTCTCAAGCTCGATCGCGAACGGACGGCGCTTACAGAGAGCATTCAGTC
CCGGATGAGCCAGATCGCTCCCAACTTGGCGGCCTTGATCGGACCGGAGA
CAGCGGCTCAGTTCTTGAACCAGACCGGAGGTCTGCTCGAGCTAGCGAAG
ATTCCTGCGTGCAACCTAGCTGCACAGGGCTCGAAGCGATCGGAAGGACT
GGGATTCGCTACAAATATTGGTATTCGGTCTCAGGGGTTCCTCTACAACT
CGCCAATTATACAAGGTGTCCCGAACGATCTCAAGCGGCAGGCCATTCGC
ATCGTCTCCGCCAAGATGGTCCTTGCTACGCGAGCAGATGTATCCAAGTA
CAGTCCTGACGGATCTTTGGGTGAAGAACTGAAGCAGCAGTGTTTCCAGC
GTCTGGAGAAACTTACGGAACCCGCGCCGAACTCGGGCGTAAAGGCGCTC
CCCGCTCCGGACGACAAGCCGTCCCGTAAGCGAGGTGGACGACGGGCGAG
AAAGGCCAAGGAAGCTGTCGCCATGACGGAACTTCGTAAGGCCCAGAACC
GGGTTGCCTTTGGTAGGGAGGAAGCAGAAGTTGGATATGGCACCGGAGAG
GGAACGGTCGGACTGGGCATGCTTGGCCAACAAAACGATGGACGGATCCG
CGCGACTCAGATCGACCAGAGAACCCGGGCGAAGCTTAGTAAGAACAACA
AGGGATGGGGTACCGCAACTCCCGTCAGTGGTACCTCTACATCTCTCCGT
GCATTCGGCTCCAATGCTAGTGGGACAGCCAGTGTGCTTCAGGCGAAGGG
GCTGCGAACCTCTGGAGTTGGCACCTCGCTGGGAGGATCAGCCGGTACTG
CCAGTACCATTGCCTTCACGCCTGTGCAAGGGTTAGAGCTGGTGGACCCT
AAGGTGCAAGCGGAATTGAGTCGGAAACGCAAGGCCGAGGAGGATCGGTG
GTTCAAGTCTGGCACATTCACGCAGGTTGGTGGCCAGAGCAGCACGGCGC
CTCAAGGGGGGAATGGAGGCTTCAAGGTTCCGGCATTGCCTCCGAAGAAG
AAGGTCGATACCGGCGAGGGCAGAATGGCACCGCCACCGCCGCCGGTGAA
GCAGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:443436..444992-

>ASPNIDRAFT_52785-T1 ID=ASPNIDRAFT_52785-T1|Name=ASPNIDRAFT_52785-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1557bp|location=Sequence derived from alignment at ACJE01000021.1:443436..444992- (Aspergillus niger ATCC 1015)
ATGTCAAATGCGGAGGAGCTTTTGAGGGATTTCGAGGAGGACGACGAGGA
TCTTCAGGCTGGCGATGGCCTCGAAGAGGAAGCTGTCGATGAGGAGCAGC
TGGCACAAGCTCCTGAGGTTACTAACGAGTTTGACGTCGCCTTGTCGACC
GCCGACGAACTGACCCGTCTACACAAAGTGCTGCGCGATCACTACTCTAT
ACGGTTTCCTGAGCTCGAGACGCTCGTGACTACTCCGATCGACTATGCGA
AAACTGTCGCTATCCTAAAAAATGGCCCGCTCAACGATATTAAAGCTCTG
TCAACCTCGTCAGATAACATGGTTGGCGTGCCACTGAGGTCAATTTTGGA
TGGGCCATCCCTGATGGTTGTGGCCGTGGAGGGTACCACCACTCGAGGCC
GGGAGATGACCGAGGCCGAACTCAAGACCGTGATGGATACATGCGAACGG
ATTCTCAAGCTCGATCGCGAACGGACGGCGCTTACAGAGAGCATTCAGTC
CCGGATGAGCCAGATCGCTCCCAACTTGGCGGCCTTGATCGGACCGGAGA
CAGCGGCTCAGTTCTTGAACCAGACCGGAGGTCTGCTCGAGCTAGCGAAG
ATTCCTGCGTGCAACCTAGCTGCACAGGGCTCGAAGCGATCGGAAGGACT
GGGATTCGCTACAAATATTGGTATTCGGTCTCAGGGGTTCCTCTACAACT
CGCCAATTATACAAGGTGTCCCGAACGATCTCAAGCGGCAGGCCATTCGC
ATCGTCTCCGCCAAGATGGTCCTTGCTACGCGAGCAGATGTATCCAAGTA
CAGTCCTGACGGATCTTTGGGTGAAGAACTGAAGCAGCAGTGTTTCCAGC
GTCTGGAGAAACTTACGGAACCCGCGCCGAACTCGGGCGTAAAGGCGCTC
CCCGCTCCGGACGACAAGCCGTCCCGTAAGCGAGGTGGACGACGGGCGAG
AAAGGCCAAGGAAGCTGTCGCCATGACGGAACTTCGTAAGGCCCAGAACC
GGGTTGCCTTTGGTAGGGAGGAAGCAGAAGTTGGATATGGCACCGGAGAG
GGAACGGTCGGACTGGGCATGCTTGGCCAACAAAACGATGGACGGATCCG
CGCGACTCAGATCGACCAGAGAACCCGGGCGAAGCTTAGTAAGAACAACA
AGGGATGGGGTACCGCAACTCCCGTCAGTGGTACCTCTACATCTCTCCGT
GCATTCGGCTCCAATGCTAGTGGGACAGCCAGTGTGCTTCAGGCGAAGGG
GCTGCGAACCTCTGGAGTTGGCACCTCGCTGGGAGGATCAGCCGGTACTG
CCAGTACCATTGCCTTCACGCCTGTGCAAGGGTTAGAGCTGGTGGACCCT
AAGGTGCAAGCGGAATTGAGTCGGAAACGCAAGGCCGAGGAGGATCGGTG
GTTCAAGTCTGGCACATTCACGCAGGTTGGTGGCCAGAGCAGCACGGCGC
CTCAAGGGGGGAATGGAGGCTTCAAGGTTCCGGCATTGCCTCCGAAGAAG
AAGGTCGATACCGGCGAGGGCAGAATGGCACCGCCACCGCCGCCGGTGAA
GCAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52785ASPNIDRAFT_52785Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52785-T1.cdsASPNIDRAFT_52785-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52785-T1.exon1ASPNIDRAFT_52785-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52785-T1ASPNIDRAFT_52785-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264B2X
DBxrefInterPro:IPR036070
DBxrefInterPro:IPR042239
DBxrefInterPro:IPR002687
DBxrefInterPro:IPR029012
DBxrefInterPro:IPR019175
DBxrefInterPro:IPR012976
DBxrefPFAM:PF09785
DBxrefPFAM:PF01798
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:443436..444992 -
Powered by Drupal