|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:659880..660880- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52907-T1 ID=ASPNIDRAFT_52907-T1|Name=ASPNIDRAFT_52907-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1001bp|location=Sequence derived from alignment at ACJE01000019.1:659880..660880- (Aspergillus niger ATCC 1015)
CTCAATTCTGTATCCATCCACATCAAGCATCACCAATCCCACGCAAACTC
ACATCCCACAATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCA
GAGGTACACACCACTTTTCTTATTCTCATCCCCATACCACACCACCCTCT
TCGTCCAGCTTACCCACAAAATAATCCAGGGATTGGCCTCGCCCTCACCC
AAACTCTCCTGCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAAC
CCCACCACGAACTCTCTCTATACTAACCCCCCACCAACATCCCCCACCTC
AACCCTCATCCTCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTA
CAGCCATCGAAACCCTCAAATCGAAACACAACATCACGCACATCGACACC
GTGATTTCCAACGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAA
CATCCCTCTCTCTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCA
CAATCCGCCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAG
CCGATGTTTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGA
GGAGGAATTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTA
ACTGGGTGACGAGGAAAATGCATGTTGAGAACGAGGAGATGGTTTGTTTC
ATGGTTCATCCGGGGTGAGCTTACTATCTTGTGCTTAGGAATGGGTTAGG
GTACTGATATGAAATGCGTAGGTTCGTCAAGACTGAGATGGGGAATGCGT
GTGCGAAGAGTATTGGGTTGGAAGAGGCATTCTCGGAGCCGAAGGAGTGT
GCGGAGGCTTTGGTGAAGTTGGTAAGTCTATATTCGTATTTGTACTTCTT
ATATATTGGTGTGATACTGAGTAGACCAGATTGAAAGCGCCACGAGGGAA
ACAGTTGGAGGCCGGTTCATCAGTTGGAGAGGGGAAGAGGTTCCTTTCTA
A back to topCoding sequence (CDS) from alignment at ACJE01000019.1:659880..660880- >ASPNIDRAFT_52907-T1 ID=ASPNIDRAFT_52907-T1|Name=ASPNIDRAFT_52907-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3084bp|location=Sequence derived from alignment at ACJE01000019.1:659880..660880- (Aspergillus niger ATCC 1015)
ATTGAAAGCGCCACGAGGGAAACAGTTGGAGGCCGGTTCATCAGTTGGAG
AGGGGAAGAGGTTCCTTTCTAAGTTCGTCAAGACTGAGATGGGGAATGCG
TGTGCGAAGAGTATTGGGTTGGAAGAGGCATTCTCGGAGCCGAAGGAGTG
TGCGGAGGCTTTGGTGAAGTTGCTTACCCACAAAATAATCCAGGGATTGG
CCTCGCCCTCACCCAAACTCTCCTGCTCCTCCCAAACACCACTGTGATCG
CTACCATGCGCAACCCCACCACGAACTCTCTCTATACTAACCCCCCACCA
ACATCCCCCACCTCAACCCTCATCCTCCTTCCCCTCGACATCCAATCCAC
CACCTCAATTACTACAGCCATCGAAACCCTCAAATCGAAACACAACATCA
CGCACATCGACACCGTGATTTCCAACGCAGGGTACTACAACGACGCCACC
CACCGCGTCGACAACATCCCTCTCTCTACTGTGCAATCGCACTTGGACGT
GAACACGCTTGGCACAATCCGCCTCTTCCAGGGTGTGTATGACATGCTGA
AGAAGAGCACGAAGCCGATGTTTGTCAGTGTTAGTAGCTTCCTGGGGAGT
ATCGGCGGTCTCGAGGAGGAATTCTTTCCCGGGGCTGCATACGGGGTTAG
TAAGGCTGCCAGTAACTGGGTGACGAGGAAAATGCATGTTGAGAACGAGG
AGATGGTTTGTTTCATGGTTCATCCGGGATGTCATCCCCAACCATCTACC
TCATCACCGGGGCCAGCAGAGATTGAAAGCGCCACGAGGGAAACAGTTGG
AGGCCGGTTCATCAGTTGGAGAGGGGAAGAGGTTCCTTTCTAAGTTCGTC
AAGACTGAGATGGGGAATGCGTGTGCGAAGAGTATTGGGTTGGAAGAGGC
ATTCTCGGAGCCGAAGGAGTGTGCGGAGGCTTTGGTGAAGTTGCTTACCC
ACAAAATAATCCAGGGATTGGCCTCGCCCTCACCCAAACTCTCCTGCTCC
TCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCACGAACTCT
CTCTATACTAACCCCCCACCAACATCCCCCACCTCAACCCTCATCCTCCT
TCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCATCGAAACCC
TCAAATCGAAACACAACATCACGCACATCGACACCGTGATTTCCAACGCA
GGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCTCTCTCTAC
TGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCGCCTCTTCC
AGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGTTTGTCAGT
GTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAATTCTTTCC
CGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGTGACGAGGA
AAATGCATGTTGAGAACGAGGAGATGGTTTGTTTCATGGTTCATCCGGGA
TGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAGATTGAAAG
CGCCACGAGGGAAACAGTTGGAGGCCGGTTCATCAGTTGGAGAGGGGAAG
AGGTTCCTTTCTAAGTTCGTCAAGACTGAGATGGGGAATGCGTGTGCGAA
GAGTATTGGGTTGGAAGAGGCATTCTCGGAGCCGAAGGAGTGTGCGGAGG
CTTTGGTGAAGTTGCTTACCCACAAAATAATCCAGGGATTGGCCTCGCCC
TCACCCAAACTCTCCTGCTCCTCCCAAACACCACTGTGATCGCTACCATG
CGCAACCCCACCACGAACTCTCTCTATACTAACCCCCCACCAACATCCCC
CACCTCAACCCTCATCCTCCTTCCCCTCGACATCCAATCCACCACCTCAA
TTACTACAGCCATCGAAACCCTCAAATCGAAACACAACATCACGCACATC
GACACCGTGATTTCCAACGCAGGGTACTACAACGACGCCACCCACCGCGT
CGACAACATCCCTCTCTCTACTGTGCAATCGCACTTGGACGTGAACACGC
TTGGCACAATCCGCCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGC
ACGAAGCCGATGTTTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGG
TCTCGAGGAGGAATTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTG
CCAGTAACTGGGTGACGAGGAAAATGCATGTTGAGAACGAGGAGATGGTT
TGTTTCATGGTTCATCCGGGATGTCATCCCCAACCATCTACCTCATCACC
GGGGCCAGCAGAGATTGAAAGCGCCACGAGGGAAACAGTTGGAGGCCGGT
TCATCAGTTGGAGAGGGGAAGAGGTTCCTTTCTAAGTTCGTCAAGACTGA
GATGGGGAATGCGTGTGCGAAGAGTATTGGGTTGGAAGAGGCATTCTCGG
AGCCGAAGGAGTGTGCGGAGGCTTTGGTGAAGTTGCTTACCCACAAAATA
ATCCAGGGATTGGCCTCGCCCTCACCCAAACTCTCCTGCTCCTCCCAAAC
ACCACTGTGATCGCTACCATGCGCAACCCCACCACGAACTCTCTCTATAC
TAACCCCCCACCAACATCCCCCACCTCAACCCTCATCCTCCTTCCCCTCG
ACATCCAATCCACCACCTCAATTACTACAGCCATCGAAACCCTCAAATCG
AAACACAACATCACGCACATCGACACCGTGATTTCCAACGCAGGGTACTA
CAACGACGCCACCCACCGCGTCGACAACATCCCTCTCTCTACTGTGCAAT
CGCACTTGGACGTGAACACGCTTGGCACAATCCGCCTCTTCCAGGGTGTG
TATGACATGCTGAAGAAGAGCACGAAGCCGATGTTTGTCAGTGTTAGTAG
CTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAATTCTTTCCCGGGGCTG
CATACGGGGTTAGTAAGGCTGCCAGTAACTGGGTGACGAGGAAAATGCAT
GTTGAGAACGAGGAGATGGTTTGTTTCATGGTTCATCCGGGATGTCATCC
CCAACCATCTACCTCATCACCGGGGCCAGCAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000191.3 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000019.1 | supercontig | ACJE01000019.1:659880..660880 - |
|
