You are here

Home

ASPNIDRAFT_52941-T1, ASPNIDRAFT_52941-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52941-T1
Unique NameASPNIDRAFT_52941-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:983003..984546+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52941-T1 ID=ASPNIDRAFT_52941-T1|Name=ASPNIDRAFT_52941-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1544bp|location=Sequence derived from alignment at ACJE01000019.1:983003..984546+ (Aspergillus niger ATCC 1015)
ATGGCTCGTCGTTTTTTCGCCGCCTGCAGCGCCCTGCTGCTGGCCACGCA
AGCAGCCGCCGATAATTTCCCCTACAACTCCTACCGCACCGCTCCATACA
CCCCTCCCCAAATCAAGATCACCAAGTCCGGCCAAACCGACCCTGGATAT
ATCTTCGTCGGTCCCCGTGGAAATCAGCCGCAAGGAACGGCAGCTCTGAT
ATACGATGAGGATGGTCAGTTGGTCTACGAAGGGCCGGAGGAGGTAACGG
CCAACTTCAAGGTGCAGAAACTCTTCAACGAGGACGTCATCACCTTCTGG
GCCGGAAATATGATGGATTTGGGTTTTGGATACGGCACGGTTCATATTCT
TGATAACACCTACCGCGAAATCTACACCGTCACCCTCCAGGACAACTTCG
TCTCTCCCGACGGCACCCCTAGAGATTCGTACATCGATCTACACGAGAGT
CATGTGACGGATCGCAACACACTCTTGGTCACAGCCTACAACGTCACCCA
ACACGATTTGTCTTCTATCGGCGGCAAGCCAGACGACTACATGCTTGACG
GCATGTTCTTCGAAATTGATATCGCGACCAACGAGATTGTGTATCAGTGG
AGCGCATTGGACCACCTTCAGGACATCCCCCTCGAGGCCTCCAAGCAGGG
CTTGGGAGAAGACCAGGGAACGCAGGACAAGCCCTGGGACGCTTACCACA
TCAACTCGGTCGAGCTGATGAATGAAGGATACATCATTTCGCTGCGTCAC
TACTGGTCCGGCTTCTATGTCCACAACAATGGGACAGTGATGTGGCAGCT
CAGTGTAAGTGAAATCTCTTAGCTCTTAGTTGTAACCCACCAGCTAATTT
TTGATAGGGTGAGCGCAATGCCGGCGACTTTGAAATTGATGACGGTGCCA
TCTTCTCCTGGCAGCACGACATCCGTGTCTACCACCAGACGGAAGACAGC
ATGGAGATCAGCTTGTTCAACAACGCCAACACACCCACGGATACTGTCGA
CGCAACCACCGGCTTGAATCTGCACGTTGACCTGACCAACCGCAAGGTGT
CAACGCTGCGCACGCTAAAAGACTCAAGCGACGTGATACACAGTGTTAGC
CAGGGCAGCTACCAGCTTCTCAGTGAGGAGACGTCCCACGTTGTGCTCGG
CTACGGTTCCATCGCGAAAGTCAAGGAATATGACGCCCACAATAATGAGG
TGATGACGGCGCAGTTTGGTGACGACAATGCGGTGGCGTCTTACCGCGGC
TACAAGTGCCAGTGGAAGGCGACCCCCTTCTGGCAGCCCGCGGTGGCGAT
CGTCCGGACGACGTCGGATGCGGCCACTCTGTTTATGAGCTGGAACGGGG
CCACGGAGTATGACAACTGGGCCATCTATACGGCCTCGTCGGCAGATGCG
GTCGACCCGACATTTGTCACGTCGATCAAGCGCAACGGGTTTGAGACCAC
GGCGCATGTGACGGGACTGCGCACCAACTGGCTCCAAGTGGTTGCTCGGA
AGGGTAACGTTCCTCTGGGGACATCCGCCATGGCGTACTTCTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:983003..984546+

>ASPNIDRAFT_52941-T1 ID=ASPNIDRAFT_52941-T1|Name=ASPNIDRAFT_52941-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2982bp|location=Sequence derived from alignment at ACJE01000019.1:983003..984546+ (Aspergillus niger ATCC 1015)
ATGGCTCGTCGTTTTTTCGCCGCCTGCAGCGCCCTGCTGCTGGCCACGCA
AGCAGCCGCCGATAATTTCCCCTACAACTCCTACCGCACCGCTCCATACA
CCCCTCCCCAAATCAAGATCACCAAGTCCGGCCAAACCGACCCTGGATAT
ATCTTCGTCGGTCCCCGTGGAAATCAGCCGCAAGGAACGGCAGCTCTGAT
ATACGATGAGGATGGTCAGTTGGTCTACGAAGGGCCGGAGGAGGTAACGG
CCAACTTCAAGGTGCAGAAACTCTTCAACGAGGACGTCATCACCTTCTGG
GCCGGAAATATGATGGATTTGGGTTTTGGATACGGCACGGTTCATATTCT
TGATAACACCTACCGCGAAATCTACACCGTCACCCTCCAGGACAACTTCG
TCTCTCCCGACGGCACCCCTAGAGATTCGTACATCGATCTACACGAGAGT
CATGTGACGGATCGCAACACACTCTTGGTCACAGCCTACAACGTCACCCA
ACACGATTTGTCTTCTATCGGCGGCAAGCCAGACGACTACATGCTTGACG
GCATGTTCTTCGAAATTGATATCGCGACCAACGAGATTGTGTATCAGTGG
AGCGCATTGGACCACCTTCAGGACATCCCCCTCGAGGCCTCCAAGCAGGG
CTTGGGAGAAGACCAGGGAACGCAGGACAAGCCCTGGGACGCTTACCACA
TCAACTCGGTCGAGCTGATGAATGAAGGATACATCATTTCGCTGCGTCAC
TACTGGTCCGGCTTCTATGTCCACAACAATGGGACAGTGATGTGGCAGCT
CAGTGGTGAGCGCAATGCCGGCGACTTTGAAATTGATGACGGTGCCATCT
TCTCCTGGCAGCACGACATCCGTGTCTACCACCAGACGGAAGACAGCATG
GAGATCAGCTTGTTCAACAACGCCAACACACCCACGGATACTGTCGACGC
AACCACCGGCTTGAATCTGCACGTTGACCTGACCAACCGCAAGGTGTCAA
CGCTGCGCACGCTAAAAGACTCAAGCGACGTGATACACAGTGTTAGCCAG
GGCAGCTACCAGCTTCTCAGTGAGGAGACGTCCCACGTTGTGCTCGGCTA
CGGTTCCATCGCGAAAGTCAAGGAATATGACGCCCACAATAATGAGGTGA
TGACGGCGCAGTTTGGTGACGACAATGCGGTGGCGTCTTACCGCGGCTAC
AAGTGCCAGTGGAAGGCGACCCCCTTCTGGCAGCCCGCGGTGGCGATCGT
CCGGACGACGTCGGATGCGGCCACTCTGTTTATGAGCTGGAACGGGGCCA
CGGAGTATGACAACTGGGCCATCTATACGGCCTCGTCGGCAGATGCGGTC
GACCCGACATTTGTCACGTCGATCAAGCGCAACGGGTTTGAGACCACGGC
GCATGTGACGGGACTGCGCACCAACTGGCTCCAAGTGGTTGCTCGGAAGG
GTAACGTTCCTCTGGGGACATCCGCCATGGCGTACTTCTAGATGGCTCGT
CGTTTTTTCGCCGCCTGCAGCGCCCTGCTGCTGGCCACGCAAGCAGCCGC
CGATAATTTCCCCTACAACTCCTACCGCACCGCTCCATACACCCCTCCCC
AAATCAAGATCACCAAGTCCGGCCAAACCGACCCTGGATATATCTTCGTC
GGTCCCCGTGGAAATCAGCCGCAAGGAACGGCAGCTCTGATATACGATGA
GGATGGTCAGTTGGTCTACGAAGGGCCGGAGGAGGTAACGGCCAACTTCA
AGGTGCAGAAACTCTTCAACGAGGACGTCATCACCTTCTGGGCCGGAAAT
ATGATGGATTTGGGTTTTGGATACGGCACGGTTCATATTCTTGATAACAC
CTACCGCGAAATCTACACCGTCACCCTCCAGGACAACTTCGTCTCTCCCG
ACGGCACCCCTAGAGATTCGTACATCGATCTACACGAGAGTCATGTGACG
GATCGCAACACACTCTTGGTCACAGCCTACAACGTCACCCAACACGATTT
GTCTTCTATCGGCGGCAAGCCAGACGACTACATGCTTGACGGCATGTTCT
TCGAAATTGATATCGCGACCAACGAGATTGTGTATCAGTGGAGCGCATTG
GACCACCTTCAGGACATCCCCCTCGAGGCCTCCAAGCAGGGCTTGGGAGA
AGACCAGGGAACGCAGGACAAGCCCTGGGACGCTTACCACATCAACTCGG
TCGAGCTGATGAATGAAGGATACATCATTTCGCTGCGTCACTACTGGTCC
GGCTTCTATGTCCACAACAATGGGACAGTGATGTGGCAGCTCAGTGGTGA
GCGCAATGCCGGCGACTTTGAAATTGATGACGGTGCCATCTTCTCCTGGC
AGCACGACATCCGTGTCTACCACCAGACGGAAGACAGCATGGAGATCAGC
TTGTTCAACAACGCCAACACACCCACGGATACTGTCGACGCAACCACCGG
CTTGAATCTGCACGTTGACCTGACCAACCGCAAGGTGTCAACGCTGCGCA
CGCTAAAAGACTCAAGCGACGTGATACACAGTGTTAGCCAGGGCAGCTAC
CAGCTTCTCAGTGAGGAGACGTCCCACGTTGTGCTCGGCTACGGTTCCAT
CGCGAAAGTCAAGGAATATGACGCCCACAATAATGAGGTGATGACGGCGC
AGTTTGGTGACGACAATGCGGTGGCGTCTTACCGCGGCTACAAGTGCCAG
TGGAAGGCGACCCCCTTCTGGCAGCCCGCGGTGGCGATCGTCCGGACGAC
GTCGGATGCGGCCACTCTGTTTATGAGCTGGAACGGGGCCACGGAGTATG
ACAACTGGGCCATCTATACGGCCTCGTCGGCAGATGCGGTCGACCCGACA
TTTGTCACGTCGATCAAGCGCAACGGGTTTGAGACCACGGCGCATGTGAC
GGGACTGCGCACCAACTGGCTCCAAGTGGTTGCTCGGAAGGGTAACGTTC
CTCTGGGGACATCCGCCATGGCGTACTTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52941ASPNIDRAFT_52941Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52941-T1.exon1ASPNIDRAFT_52941-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52941-T1.exon2ASPNIDRAFT_52941-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52941-T1.cdsASPNIDRAFT_52941-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52941-T1ASPNIDRAFT_52941-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR039535
DBxrefPFAM:PF14269
DBxrefPFAM:PF05935
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:983003..984546 +
Powered by Drupal