You are here

Home

ASPNIDRAFT_53033-T1, ASPNIDRAFT_53033-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53033-T1
Unique NameASPNIDRAFT_53033-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2239002..2241022+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53033-T1 ID=ASPNIDRAFT_53033-T1|Name=ASPNIDRAFT_53033-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2021bp|location=Sequence derived from alignment at ACJE01000019.1:2239002..2241022+ (Aspergillus niger ATCC 1015)
CTCCTTCCCAGCCACTTCCATCATCCATCCAGCCATCGCTATATCCACGG
CGCCTTGTTTCAGCCGTCAGTCACTCGTTGTATACTTCTAGACTTTCTTC
CTCTTTCTCCCTTGTATCTTAACTCTCCTGTGGAAAGTTGATACCTCGGG
ACTGCAGTGCTTTCCATCTGCAGACTTAAAGAACCAGCTACATTGAATTC
GGACTCTCGCTTCACACATAACTGTTCACCATAATGAAGTTCTCCGCTAC
TACCCTTGCTGGAGCTTCGCTCCTTCTGGGCCGCGCCATTGCCGCGGACC
TGCCTGCCATTGAGGCCAAGGTATGTTTCCACCATCCGTTGCAGGGCTGG
GGATCAAGTTCCTAACTGGTCGGCACTGGGAATAGAGCAACAAGTTCTTC
TACTCCAACAATGGCACCCAATTGTAAGTTGGTTCAAACTTCTGATATCT
TTTCCGCATTCCTTACTGACCAATGCTAGCTTCATCCGTGGCGTTGCCTA
TCAGCGTATGTAGCTCAATCGTCCACAGCGCATCGACGCGCAGCTAACCC
ATCACCAGAGGACTACACGAGCAACGGCACTGATTCCTCCAACGCGGACT
ACACCGACCCTCTGGCCGATGCCTCCACCTGCAAGCGTGATATCCCCTAC
CTCCAGCAGCTGCGCACCAACGTGATCCGTACCTATGCTGTCGACCCCAC
CAAGGACCACACCGAGTGCATGCAGGCGCTGCAGGATGCTGGCATCTACC
TCATCACTGACCTGTCGGCCCCCTCGACCTCCATCAACCGGGACGACCCC
CAGTGGAACACCGACCTCTACTCTCGCTACACCAGCGTCGTCGATGCCTT
TGCCAACTACACCAACGTCATCGGTTTCTTCGCCGGTAACGAGGTTGCCA
ACAGCCAGAACAACACCAACGCCATTGCCTACGTCAAGGCCGCCGTGCGT
GACATGAAGGCCTACATCAAGGCCAAGAACTACCGTAGCTCCCTCGGCGT
TGGTTATGCCACTGACGACGACTCCACCATCCGTGACGACCTGAAGAACT
ACCTGGTCTGCGGTGATTCGGACGACCGCATCGACTTCTTCGGTTACAAC
ATCTACGAGTGGTGCGGTGACTCTTCCTTCAAGACCTCCGGTTACCAGGC
CCGTACCGAGGAGTTCAAGGACTACCCCGTCCCTGCCTTCTTCTCCGAGT
ATGGCTGCAACAGCCCCTCTCCCCGTACCTTCACCGATGTCCCCGTCCTC
TTCGGTGACCAGATGAACGACGTCTGGAGCGGTGGTATCGTCTACATGTA
CTTCCAGGAGGACAACGACTACGGTCTGGTGTCGGTCGACGGCTCCAGCG
TCAGCACCCTCAAGGACTTCTCCAACCTGTCTTCCCAGATGCTGAAGGCC
ACCGCCACCGGTGTGAACAGCAACAGCTGGTCCGCTAGCAACACTGCCAC
CCCTACTTGCCCTAGCGTCGGCACCGCCTGGGAGGCCACCAACACTCTGC
CCCCCTCCCCCAACGAGGATCTCTGCTCCTGCATGGAGGCTTCTCTGTCT
TGCGTCGTCAAGGACTCGGTCAAGGAGAGCAAGTACGGTGACCTGTTCGA
CTACATCTGCGCCAAGGGTGACTACTGCGCCGGCATGTCCAGCAACTCGA
CCACCGGTGACTACGGTGCCTACAGTGTCTGCTCCACCAAGCAGCAGCTC
AGCTTCGTCATGAACCAGTACTACGAGAAGCAGAGCGCCAAGGCCAGCGC
TTGCGACTTCAGCGGTGATGGTACCACCACCTCTTCCAGCGCCGCCACTG
GCACCTGCTCTTCCCTGCTCAAGGAGGCTGGCACCGCCGGTACCGGCAGC
GTTACTTCCTCCCCCACCGGCGGCGGCTCCGTTGCCAGCGCCAGCTCCAG
CACCTCCGAGGGTGCTGGTGCCGGTCTGTCTGCCCCTAACGCTGTCCAGG
TCGGCAGCTGGCAGCTGGGTGCCTATGCGGTGACCGCCGTTGGCGCCGCT
CTTGGCATGATCCTGCTGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2239002..2241022+

>ASPNIDRAFT_53033-T1 ID=ASPNIDRAFT_53033-T1|Name=ASPNIDRAFT_53033-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6456bp|location=Sequence derived from alignment at ACJE01000019.1:2239002..2241022+ (Aspergillus niger ATCC 1015)
ATGAAGTTCTCCGCTACTACCCTTGCTGGAGCTTCGCTCCTTCTGGGCCG
CGCCATTGCCGCGGACCTGCCTGCCATTGAGGCCAAGAGCAACAAGTTCT
TCTACTCCAACAATGGCACCCAATTCTTCATCCGTGGCGTTGCCTATCAG
CAGGACTACACGAGCAACGGCACTGATTCCTCCAACGCGGACTACACCGA
CCCTCTGGCCGATGCCTCCACCTGCAAGCGTGATATCCCCTACCTCCAGC
AGCTGCGCACCAACGTGATCCGTACCTATGCTGTCGACCCCACCAAGGAC
CACACCGAGTGCATGCAGGCGCTGCAGGATGCTGGCATCTACCTCATCAC
TGACCTGTCGGCCCCCTCGACCTCCATCAACCGGGACGACCCCCAGTGGA
ACACCGACCTCTACTCTCGCTACACCAGCGTCGTCGATGCCTTTGCCAAC
TACACCAACGTCATCGGTTTCTTCGCCGGTAACGAGGTTGCCAACAGCCA
GAACAACACCAACGCCATTGCCTACGTCAAGGCCGCCGTGCGTGACATGA
AGGCCTACATCAAGGCCAAGAACTACCGTAGCTCCCTCGGCGTTGGTTAT
GCCACTGACGACGACTCCACCATCCGTGACGACCTGAAGAACTACCTGGT
CTGCGGTGATTCGGACGACCGCATCGACTTCTTCGGTTACAACATCTACG
AGTGGTGCGGTGACTCTTCCTTCAAGACCTCCGGTTACCAGGCCCGTACC
GAGGAGTTCAAGGACTACCCCGTCCCTGCCTTCTTCTCCGAGTATGGCTG
CAACAGCCCCTCTCCCCGTACCTTCACCGATGTCCCCGTCCTCTTCGGTG
ACCAGATGAACGACGTCTGGAGCGGTGGTATCGTCTACATGTACTTCCAG
GAGGACAACGACTACGGTCTGGTGTCGGTCGACGGCTCCAGCGTCAGCAC
CCTCAAGGACTTCTCCAACCTGTCTTCCCAGATGCTGAAGGCCACCGCCA
CCGGTGTGAACAGCAACAGCTGGTCCGCTAGCAACACTGCCACCCCTACT
TGCCCTAGCGTCGGCACCGCCTGGGAGGCCACCAACACTCTGCCCCCCTC
CCCCAACGAGGATCTCTGCTCCTGCATGGAGGCTTCTCTGTCTTGCGTCG
TCAAGGACTCGGTCAAGGAGAGCAAGTACGGTGACCTGTTCGACTACATC
TGCGCCAAGGGTGACTACTGCGCCGGCATGTCCAGCAACTCGACCACCGG
TGACTACGGTGCCTACAGTGTCTGCTCCACCAAGCAGCAGCTCAGCTTCG
TCATGAACCAGTACTACGAGAAGCAGAGCGCCAAGGCCAGCGCTTGCGAC
TTCAGCGGTGATGGTACCACCACCTCTTCCAGCGCCGCCACTGGCACCTG
CTCTTCCCTGCTCAAGGAGGCTGGCACCGCCGGTACCGGCAGCGTTACTT
CCTCCCCCACCGGCGGCGGCTCCGTTGCCAGCGCCAGCTCCAGCACCTCC
GAGGGTGCTGGTGCCGGTCTGTCTGCCCCTAACGCTGTCCAGGTCGGCAG
CTGGCAGCTGGGTGCCTATGCGGTGACCGCCGTTGGCGCCGCTCTTGGCA
TGATCCTGCTGTAAATGAAGTTCTCCGCTACTACCCTTGCTGGAGCTTCG
CTCCTTCTGGGCCGCGCCATTGCCGCGGACCTGCCTGCCATTGAGGCCAA
GAGCAACAAGTTCTTCTACTCCAACAATGGCACCCAATTCTTCATCCGTG
GCGTTGCCTATCAGCAGGACTACACGAGCAACGGCACTGATTCCTCCAAC
GCGGACTACACCGACCCTCTGGCCGATGCCTCCACCTGCAAGCGTGATAT
CCCCTACCTCCAGCAGCTGCGCACCAACGTGATCCGTACCTATGCTGTCG
ACCCCACCAAGGACCACACCGAGTGCATGCAGGCGCTGCAGGATGCTGGC
ATCTACCTCATCACTGACCTGTCGGCCCCCTCGACCTCCATCAACCGGGA
CGACCCCCAGTGGAACACCGACCTCTACTCTCGCTACACCAGCGTCGTCG
ATGCCTTTGCCAACTACACCAACGTCATCGGTTTCTTCGCCGGTAACGAG
GTTGCCAACAGCCAGAACAACACCAACGCCATTGCCTACGTCAAGGCCGC
CGTGCGTGACATGAAGGCCTACATCAAGGCCAAGAACTACCGTAGCTCCC
TCGGCGTTGGTTATGCCACTGACGACGACTCCACCATCCGTGACGACCTG
AAGAACTACCTGGTCTGCGGTGATTCGGACGACCGCATCGACTTCTTCGG
TTACAACATCTACGAGTGGTGCGGTGACTCTTCCTTCAAGACCTCCGGTT
ACCAGGCCCGTACCGAGGAGTTCAAGGACTACCCCGTCCCTGCCTTCTTC
TCCGAGTATGGCTGCAACAGCCCCTCTCCCCGTACCTTCACCGATGTCCC
CGTCCTCTTCGGTGACCAGATGAACGACGTCTGGAGCGGTGGTATCGTCT
ACATGTACTTCCAGGAGGACAACGACTACGGTCTGGTGTCGGTCGACGGC
TCCAGCGTCAGCACCCTCAAGGACTTCTCCAACCTGTCTTCCCAGATGCT
GAAGGCCACCGCCACCGGTGTGAACAGCAACAGCTGGTCCGCTAGCAACA
CTGCCACCCCTACTTGCCCTAGCGTCGGCACCGCCTGGGAGGCCACCAAC
ACTCTGCCCCCCTCCCCCAACGAGGATCTCTGCTCCTGCATGGAGGCTTC
TCTGTCTTGCGTCGTCAAGGACTCGGTCAAGGAGAGCAAGTACGGTGACC
TGTTCGACTACATCTGCGCCAAGGGTGACTACTGCGCCGGCATGTCCAGC
AACTCGACCACCGGTGACTACGGTGCCTACAGTGTCTGCTCCACCAAGCA
GCAGCTCAGCTTCGTCATGAACCAGTACTACGAGAAGCAGAGCGCCAAGG
CCAGCGCTTGCGACTTCAGCGGTGATGGTACCACCACCTCTTCCAGCGCC
GCCACTGGCACCTGCTCTTCCCTGCTCAAGGAGGCTGGCACCGCCGGTAC
CGGCAGCGTTACTTCCTCCCCCACCGGCGGCGGCTCCGTTGCCAGCGCCA
GCTCCAGCACCTCCGAGGGTGCTGGTGCCGGTCTGTCTGCCCCTAACGCT
GTCCAGGTCGGCAGCTGGCAGCTGGGTGCCTATGCGGTGACCGCCGTTGG
CGCCGCTCTTGGCATGATCCTGCTGTAAATGAAGTTCTCCGCTACTACCC
TTGCTGGAGCTTCGCTCCTTCTGGGCCGCGCCATTGCCGCGGACCTGCCT
GCCATTGAGGCCAAGAGCAACAAGTTCTTCTACTCCAACAATGGCACCCA
ATTCTTCATCCGTGGCGTTGCCTATCAGCAGGACTACACGAGCAACGGCA
CTGATTCCTCCAACGCGGACTACACCGACCCTCTGGCCGATGCCTCCACC
TGCAAGCGTGATATCCCCTACCTCCAGCAGCTGCGCACCAACGTGATCCG
TACCTATGCTGTCGACCCCACCAAGGACCACACCGAGTGCATGCAGGCGC
TGCAGGATGCTGGCATCTACCTCATCACTGACCTGTCGGCCCCCTCGACC
TCCATCAACCGGGACGACCCCCAGTGGAACACCGACCTCTACTCTCGCTA
CACCAGCGTCGTCGATGCCTTTGCCAACTACACCAACGTCATCGGTTTCT
TCGCCGGTAACGAGGTTGCCAACAGCCAGAACAACACCAACGCCATTGCC
TACGTCAAGGCCGCCGTGCGTGACATGAAGGCCTACATCAAGGCCAAGAA
CTACCGTAGCTCCCTCGGCGTTGGTTATGCCACTGACGACGACTCCACCA
TCCGTGACGACCTGAAGAACTACCTGGTCTGCGGTGATTCGGACGACCGC
ATCGACTTCTTCGGTTACAACATCTACGAGTGGTGCGGTGACTCTTCCTT
CAAGACCTCCGGTTACCAGGCCCGTACCGAGGAGTTCAAGGACTACCCCG
TCCCTGCCTTCTTCTCCGAGTATGGCTGCAACAGCCCCTCTCCCCGTACC
TTCACCGATGTCCCCGTCCTCTTCGGTGACCAGATGAACGACGTCTGGAG
CGGTGGTATCGTCTACATGTACTTCCAGGAGGACAACGACTACGGTCTGG
TGTCGGTCGACGGCTCCAGCGTCAGCACCCTCAAGGACTTCTCCAACCTG
TCTTCCCAGATGCTGAAGGCCACCGCCACCGGTGTGAACAGCAACAGCTG
GTCCGCTAGCAACACTGCCACCCCTACTTGCCCTAGCGTCGGCACCGCCT
GGGAGGCCACCAACACTCTGCCCCCCTCCCCCAACGAGGATCTCTGCTCC
TGCATGGAGGCTTCTCTGTCTTGCGTCGTCAAGGACTCGGTCAAGGAGAG
CAAGTACGGTGACCTGTTCGACTACATCTGCGCCAAGGGTGACTACTGCG
CCGGCATGTCCAGCAACTCGACCACCGGTGACTACGGTGCCTACAGTGTC
TGCTCCACCAAGCAGCAGCTCAGCTTCGTCATGAACCAGTACTACGAGAA
GCAGAGCGCCAAGGCCAGCGCTTGCGACTTCAGCGGTGATGGTACCACCA
CCTCTTCCAGCGCCGCCACTGGCACCTGCTCTTCCCTGCTCAAGGAGGCT
GGCACCGCCGGTACCGGCAGCGTTACTTCCTCCCCCACCGGCGGCGGCTC
CGTTGCCAGCGCCAGCTCCAGCACCTCCGAGGGTGCTGGTGCCGGTCTGT
CTGCCCCTAACGCTGTCCAGGTCGGCAGCTGGCAGCTGGGTGCCTATGCG
GTGACCGCCGTTGGCGCCGCTCTTGGCATGATCCTGCTGTAAATGAAGTT
CTCCGCTACTACCCTTGCTGGAGCTTCGCTCCTTCTGGGCCGCGCCATTG
CCGCGGACCTGCCTGCCATTGAGGCCAAGAGCAACAAGTTCTTCTACTCC
AACAATGGCACCCAATTCTTCATCCGTGGCGTTGCCTATCAGCAGGACTA
CACGAGCAACGGCACTGATTCCTCCAACGCGGACTACACCGACCCTCTGG
CCGATGCCTCCACCTGCAAGCGTGATATCCCCTACCTCCAGCAGCTGCGC
ACCAACGTGATCCGTACCTATGCTGTCGACCCCACCAAGGACCACACCGA
GTGCATGCAGGCGCTGCAGGATGCTGGCATCTACCTCATCACTGACCTGT
CGGCCCCCTCGACCTCCATCAACCGGGACGACCCCCAGTGGAACACCGAC
CTCTACTCTCGCTACACCAGCGTCGTCGATGCCTTTGCCAACTACACCAA
CGTCATCGGTTTCTTCGCCGGTAACGAGGTTGCCAACAGCCAGAACAACA
CCAACGCCATTGCCTACGTCAAGGCCGCCGTGCGTGACATGAAGGCCTAC
ATCAAGGCCAAGAACTACCGTAGCTCCCTCGGCGTTGGTTATGCCACTGA
CGACGACTCCACCATCCGTGACGACCTGAAGAACTACCTGGTCTGCGGTG
ATTCGGACGACCGCATCGACTTCTTCGGTTACAACATCTACGAGTGGTGC
GGTGACTCTTCCTTCAAGACCTCCGGTTACCAGGCCCGTACCGAGGAGTT
CAAGGACTACCCCGTCCCTGCCTTCTTCTCCGAGTATGGCTGCAACAGCC
CCTCTCCCCGTACCTTCACCGATGTCCCCGTCCTCTTCGGTGACCAGATG
AACGACGTCTGGAGCGGTGGTATCGTCTACATGTACTTCCAGGAGGACAA
CGACTACGGTCTGGTGTCGGTCGACGGCTCCAGCGTCAGCACCCTCAAGG
ACTTCTCCAACCTGTCTTCCCAGATGCTGAAGGCCACCGCCACCGGTGTG
AACAGCAACAGCTGGTCCGCTAGCAACACTGCCACCCCTACTTGCCCTAG
CGTCGGCACCGCCTGGGAGGCCACCAACACTCTGCCCCCCTCCCCCAACG
AGGATCTCTGCTCCTGCATGGAGGCTTCTCTGTCTTGCGTCGTCAAGGAC
TCGGTCAAGGAGAGCAAGTACGGTGACCTGTTCGACTACATCTGCGCCAA
GGGTGACTACTGCGCCGGCATGTCCAGCAACTCGACCACCGGTGACTACG
GTGCCTACAGTGTCTGCTCCACCAAGCAGCAGCTCAGCTTCGTCATGAAC
CAGTACTACGAGAAGCAGAGCGCCAAGGCCAGCGCTTGCGACTTCAGCGG
TGATGGTACCACCACCTCTTCCAGCGCCGCCACTGGCACCTGCTCTTCCC
TGCTCAAGGAGGCTGGCACCGCCGGTACCGGCAGCGTTACTTCCTCCCCC
ACCGGCGGCGGCTCCGTTGCCAGCGCCAGCTCCAGCACCTCCGAGGGTGC
TGGTGCCGGTCTGTCTGCCCCTAACGCTGTCCAGGTCGGCAGCTGGCAGC
TGGGTGCCTATGCGGTGACCGCCGTTGGCGCCGCTCTTGGCATGATCCTG
CTGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GEL4ASPNIDRAFT_53033Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53033-T1ASPNIDRAFT_53033-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53033-T1.utr5p1ASPNIDRAFT_53033-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53033-T1.exon1ASPNIDRAFT_53033-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53033-T1.exon2ASPNIDRAFT_53033-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53033-T1.exon3ASPNIDRAFT_53033-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53033-T1.exon4ASPNIDRAFT_53033-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53033-T1.cdsASPNIDRAFT_53033-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:CBM43
NoteCAZy:GH72
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR004886
DBxrefInterPro:IPR012946
DBxrefPFAM:PF07983
DBxrefPFAM:PF03198
Product3 glucanosyltransferase
Productbeta-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2239002..2241022 +
Powered by Drupal