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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:2742004..2743162+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53103-T1 ID=ASPNIDRAFT_53103-T1|Name=ASPNIDRAFT_53103-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1159bp|location=Sequence derived from alignment at ACJE01000019.1:2742004..2743162+ (Aspergillus niger ATCC 1015)
TGCTGGTCAATCTTGTCTTCCCCCAGACTTTATCGATCCCCGACTGCGGC
AACTACTCTTGAAACAGCCTACTGGAGTCTGAGTATCCTTCGTACACCCT
CCAGAACTATATACTTCTTTACCAATCTATCAGCCCGCCAGCGTTCCCGA
TACTACGTCACAACGAAGAATGAGGATCCGGATTCGCGGTCCGGCGGGAC
AATCCACCGTCACGCTGGATGCAGATGCAACTGTCGACGACCTCCGGCAT
CAGATCACGGAGAAAACGGGGCTGACGGCGTACGATGTAAAATATGGATA
TCCAAATATCAAGCCATTGGTGCTGGGCGGGCTTCCTTCGAATCAGAAAC
TAGCGGATCTAGATATCACCCTAAACGGGGAACAACTTATCGTCACACAG
CATGAGAACTCAGCCCAGTCCCCGATCAAAAGTGAACCTCAAGCAGCAAA
TCCTCTGTTGAAAGCGCCAGCTGTAAGCAGCACACCGAAGAAGGGTTCTC
CTGATGATCCGCCGGAGGTCCCTTCGCCCGACCATAGCGGAACCTTTGTT
CTCCGAATCATGCCCGATGACAACTCTTGTCTCTTTCGTGCAGTGAGTAG
TGCAACTATGGGAGGAGTAGATGCCATGACCGAACTACGATCCGTTGTTG
CGCAAACAATTCAAGCGCACCCAGACATCTATACCGAGGCGGTATTGGAG
AAAAAGCCGGACGAATACTGCCGCTGGATTCAGAATGAGGACTCATGGGG
TGGTGGAATCGAGCTGAGCATCCTCAGCAAGCATTTCGATATTGAAATAT
GCTCCATAGACGTGCAGACCCTTCGCATCGATCGCTTCAACGAAGGCGCC
CCGATGCGGTGTATCGTGGTTTATTCAGGAATCCACTACGATACAATTGC
GTTGTCGCCTTCCAGCCCGCCTTATACTCACTCAGATGTGCCTCCTGACT
TTGATACCAAAGTCTTCGACGCTGCAGATCCATTGGTCCTTGAGAAGTCG
CAGGAACTCTGCCAAGTCCTGCAATCTAGGCATTACTACACTGACACAGC
TGGGTTTCGTCTTCGTTGCAATACGTGTGGAGGGACATTCGTCGGAGAGA
GAGGTGCTACACAGCATGCCGAACAAACAGGGCATGTTGATTTCGGCGAG
GCTGGCTGA back to topCoding sequence (CDS) from alignment at ACJE01000019.1:2742004..2743162+ >ASPNIDRAFT_53103-T1 ID=ASPNIDRAFT_53103-T1|Name=ASPNIDRAFT_53103-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=990bp|location=Sequence derived from alignment at ACJE01000019.1:2742004..2743162+ (Aspergillus niger ATCC 1015)
ATGAGGATCCGGATTCGCGGTCCGGCGGGACAATCCACCGTCACGCTGGA
TGCAGATGCAACTGTCGACGACCTCCGGCATCAGATCACGGAGAAAACGG
GGCTGACGGCGTACGATGTAAAATATGGATATCCAAATATCAAGCCATTG
GTGCTGGGCGGGCTTCCTTCGAATCAGAAACTAGCGGATCTAGATATCAC
CCTAAACGGGGAACAACTTATCGTCACACAGCATGAGAACTCAGCCCAGT
CCCCGATCAAAAGTGAACCTCAAGCAGCAAATCCTCTGTTGAAAGCGCCA
GCTGTAAGCAGCACACCGAAGAAGGGTTCTCCTGATGATCCGCCGGAGGT
CCCTTCGCCCGACCATAGCGGAACCTTTGTTCTCCGAATCATGCCCGATG
ACAACTCTTGTCTCTTTCGTGCAGTGAGTAGTGCAACTATGGGAGGAGTA
GATGCCATGACCGAACTACGATCCGTTGTTGCGCAAACAATTCAAGCGCA
CCCAGACATCTATACCGAGGCGGTATTGGAGAAAAAGCCGGACGAATACT
GCCGCTGGATTCAGAATGAGGACTCATGGGGTGGTGGAATCGAGCTGAGC
ATCCTCAGCAAGCATTTCGATATTGAAATATGCTCCATAGACGTGCAGAC
CCTTCGCATCGATCGCTTCAACGAAGGCGCCCCGATGCGGTGTATCGTGG
TTTATTCAGGAATCCACTACGATACAATTGCGTTGTCGCCTTCCAGCCCG
CCTTATACTCACTCAGATGTGCCTCCTGACTTTGATACCAAAGTCTTCGA
CGCTGCAGATCCATTGGTCCTTGAGAAGTCGCAGGAACTCTGCCAAGTCC
TGCAATCTAGGCATTACTACACTGACACAGCTGGGTTTCGTCTTCGTTGC
AATACGTGTGGAGGGACATTCGTCGGAGAGAGAGGTGCTACACAGCATGC
CGAACAAACAGGGCATGTTGATTTCGGCGAGGCTGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263S1E |
| Note | MEROPS:MER0116559 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR013087 |
| DBxref | InterPro:IPR003323 |
| DBxref | PFAM:PF02338 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000019.1 | supercontig | ACJE01000019.1:2742004..2743162 + |
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