You are here

Home

ASPNIDRAFT_53116-T1, ASPNIDRAFT_53116-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53116-T1
Unique NameASPNIDRAFT_53116-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2801817..2803500+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53116-T1 ID=ASPNIDRAFT_53116-T1|Name=ASPNIDRAFT_53116-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1684bp|location=Sequence derived from alignment at ACJE01000019.1:2801817..2803500+ (Aspergillus niger ATCC 1015)
ATGGTTCCGTCTCTGGACTATTTCCCTGAAGAGTTGCTACATCAAATTCT
TTGCTACTGCCCACCCCGTTCCGCTGCCGCATTAGAACAGACAGCTCGCC
GGTTTCGCGGAGTAACAACACAGCCTTTACTATGGCGATATTATTGCCTG
AGCCATTTTAAGCACTGGGCCCGGCAACATGGGTTATCAGCGAAGCTTGC
AAGCCCTATCTCTGCGGTAGATTGGAAATCGCTTTACATACTAAGGCATC
TAAAATACCGCGCGACCTGTCATCTTCTGGACAGTATCCTTGCAAATCAA
GCTGGAAGAATCGATAAGGTTCGAAAGATTATAGGGCTTGGTTATGATGC
TAAAGATGCCCTTCTACATAATCTTGAGATTGATTCCAATGTAGAAGATT
ACTTGGCAAGGAGGTTTGTTCTGTCTATCCATGGGACGACATCTCGTTTT
AACTGTATTGCTTTGAAATAAGATACTATGCCGAGGCGCTCCTCACTTGC
CTTCATCGAAGTCTCGCTGTACAAGAATGGGCTAAACTGAGAAATGGCGA
GGAGGTGTCTCTAGACAGGGCATTAGGTGCATTCGACCTTTTTAGACCGA
AGAGCGACTTCGGCAATTTAGAAGAGGTAAGTGACCCTTGGGCTTGAAAA
GACGTTGCTATCTAATACATTTCTAGATAAGCGATAGACTGGACTCGATT
GCCTCGCTACTTTCAATCAATTGTCCAGACATCCACAAGCTCACGTCTCG
TAATAAAGCCAGGGCGGTTGCGAAGTTCCTGAGGGCAAATAATTTCACCG
GAATTGGTGAAGAAAAAGAGTACCATTGCTTGGAGCATAACTTTCTTGGT
GTTGCTTTGAATGACCCTCAGCACAACTCACTTCCTCTAATTTCGGCAAC
TATTTACTGCTATGTTGCTGAACGAATCGGCCTGAACGCCCGGCCATGCG
GGTTTCCTTTTCATGTCCATGTAATTATCATGCCGCCCATCGGCTATGAT
ATTGACGATAATGTAATTGAAGACGGGACACGGGGCAGCCCAATCTATAT
GGATCCGTTCCGCTCAGAGAAGGAAACACCAATCACGGATCTAGAGTATC
AACTGAACTTCTTAGGTGTCACTGCGGTCGAGCGAGCGAACTTCTTGGCC
GAATCCCACCCTTCAGAGGTCGTCCTTCGGTGCAGCAAGAATATTCTGAA
CTCGGTCCAACGCATGACTCGGTTTCCTGATATGCGCCTATCACCAGTGG
AGGTGGTTTGTGCGAAGTATGCTGCCATTTGGTCCTCTTTGTTGCTTTCG
GATCTTGCCCGGCCCACCGACATCAGACATAATCTCCTATGGCTAATGGA
ACTTTTTGCGTCTGAATTTCCATCCGATATCCACCTGATTGAACAGTATG
TGGCGCCTCTGCTTCATGGGACGCCCGAGTATGAGCATATTCTGGAAAGC
CTCCATGTCATGCGTGCGGCGGATGAAATACCTAAACAGGTAAAGAGGCG
CTCTTCCCAGCGGAGGCAAGTAAAATACTGCGTTGGGCAGGTATTCAGGC
ATCGCCGGTATGATTACCGAGCCATCATAACAGGTTGGGACACGGAGTGC
GGCGCGGGTGAACAATGGATGAGAAGGATGGGAATAGATCGCTTACAGGG
TGGTAGGCACCAGAGCTTCTATCATGTGCTGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2801817..2803500+

>ASPNIDRAFT_53116-T1 ID=ASPNIDRAFT_53116-T1|Name=ASPNIDRAFT_53116-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4725bp|location=Sequence derived from alignment at ACJE01000019.1:2801817..2803500+ (Aspergillus niger ATCC 1015)
ATGGTTCCGTCTCTGGACTATTTCCCTGAAGAGTTGCTACATCAAATTCT
TTGCTACTGCCCACCCCGTTCCGCTGCCGCATTAGAACAGACAGCTCGCC
GGTTTCGCGGAGTAACAACACAGCCTTTACTATGGCGATATTATTGCCTG
AGCCATTTTAAGCACTGGGCCCGGCAACATGGGTTATCAGCGAAGCTTGC
AAGCCCTATCTCTGCGGTAGATTGGAAATCGCTTTACATACTAAGGCATC
TAAAATACCGCGCGACCTGTCATCTTCTGGACAGTATCCTTGCAAATCAA
GCTGGAAGAATCGATAAGGTTCGAAAGATTATAGGGCTTGGTTATGATGC
TAAAGATGCCCTTCTACATAATCTTGAGATTGATTCCAATGTAGAAGATT
ACTTGGCAAGGAGATACTATGCCGAGGCGCTCCTCACTTGCCTTCATCGA
AGTCTCGCTGTACAAGAATGGGCTAAACTGAGAAATGGCGAGGAGGTGTC
TCTAGACAGGGCATTAGGTGCATTCGACCTTTTTAGACCGAAGAGCGACT
TCGGCAATTTAGAAGAGATAAGCGATAGACTGGACTCGATTGCCTCGCTA
CTTTCAATCAATTGTCCAGACATCCACAAGCTCACGTCTCGTAATAAAGC
CAGGGCGGTTGCGAAGTTCCTGAGGGCAAATAATTTCACCGGAATTGGTG
AAGAAAAAGAGTACCATTGCTTGGAGCATAACTTTCTTGGTGTTGCTTTG
AATGACCCTCAGCACAACTCACTTCCTCTAATTTCGGCAACTATTTACTG
CTATGTTGCTGAACGAATCGGCCTGAACGCCCGGCCATGCGGGTTTCCTT
TTCATGTCCATGTAATTATCATGCCGCCCATCGGCTATGATATTGACGAT
AATGTAATTGAAGACGGGACACGGGGCAGCCCAATCTATATGGATCCGTT
CCGCTCAGAGAAGGAAACACCAATCACGGATCTAGAGTATCAACTGAACT
TCTTAGGTGTCACTGCGGTCGAGCGAGCGAACTTCTTGGCCGAATCCCAC
CCTTCAGAGGTCGTCCTTCGGTGCAGCAAGAATATTCTGAACTCGGTCCA
ACGCATGACTCGGTTTCCTGATATGCGCCTATCACCAGTGGAGGTGGTTT
GTGCGAAGTATGCTGCCATTTGGTCCTCTTTGTTGCTTTCGGATCTTGCC
CGGCCCACCGACATCAGACATAATCTCCTATGGCTAATGGAACTTTTTGC
GTCTGAATTTCCATCCGATATCCACCTGATTGAACAGTATGTGGCGCCTC
TGCTTCATGGGACGCCCGAGTATGAGCATATTCTGGAAAGCCTCCATGTC
ATGCGTGCGGCGGATGAAATACCTAAACAGGTAAAGAGGCGCTCTTCCCA
GCGGAGGCAAGTAAAATACTGCGTTGGGCAGGTATTCAGGCATCGCCGGT
ATGATTACCGAGCCATCATAACAGGTTGGGACACGGAGTGCGGCGCGGGT
GAACAATGGATGAGAAGGATGGGAATAGATCGCTTACAGGGTGGTAGGCA
CCAGAGCTTCTATCATGTGCTGTAAATGGTTCCGTCTCTGGACTATTTCC
CTGAAGAGTTGCTACATCAAATTCTTTGCTACTGCCCACCCCGTTCCGCT
GCCGCATTAGAACAGACAGCTCGCCGGTTTCGCGGAGTAACAACACAGCC
TTTACTATGGCGATATTATTGCCTGAGCCATTTTAAGCACTGGGCCCGGC
AACATGGGTTATCAGCGAAGCTTGCAAGCCCTATCTCTGCGGTAGATTGG
AAATCGCTTTACATACTAAGGCATCTAAAATACCGCGCGACCTGTCATCT
TCTGGACAGTATCCTTGCAAATCAAGCTGGAAGAATCGATAAGGTTCGAA
AGATTATAGGGCTTGGTTATGATGCTAAAGATGCCCTTCTACATAATCTT
GAGATTGATTCCAATGTAGAAGATTACTTGGCAAGGAGATACTATGCCGA
GGCGCTCCTCACTTGCCTTCATCGAAGTCTCGCTGTACAAGAATGGGCTA
AACTGAGAAATGGCGAGGAGGTGTCTCTAGACAGGGCATTAGGTGCATTC
GACCTTTTTAGACCGAAGAGCGACTTCGGCAATTTAGAAGAGATAAGCGA
TAGACTGGACTCGATTGCCTCGCTACTTTCAATCAATTGTCCAGACATCC
ACAAGCTCACGTCTCGTAATAAAGCCAGGGCGGTTGCGAAGTTCCTGAGG
GCAAATAATTTCACCGGAATTGGTGAAGAAAAAGAGTACCATTGCTTGGA
GCATAACTTTCTTGGTGTTGCTTTGAATGACCCTCAGCACAACTCACTTC
CTCTAATTTCGGCAACTATTTACTGCTATGTTGCTGAACGAATCGGCCTG
AACGCCCGGCCATGCGGGTTTCCTTTTCATGTCCATGTAATTATCATGCC
GCCCATCGGCTATGATATTGACGATAATGTAATTGAAGACGGGACACGGG
GCAGCCCAATCTATATGGATCCGTTCCGCTCAGAGAAGGAAACACCAATC
ACGGATCTAGAGTATCAACTGAACTTCTTAGGTGTCACTGCGGTCGAGCG
AGCGAACTTCTTGGCCGAATCCCACCCTTCAGAGGTCGTCCTTCGGTGCA
GCAAGAATATTCTGAACTCGGTCCAACGCATGACTCGGTTTCCTGATATG
CGCCTATCACCAGTGGAGGTGGTTTGTGCGAAGTATGCTGCCATTTGGTC
CTCTTTGTTGCTTTCGGATCTTGCCCGGCCCACCGACATCAGACATAATC
TCCTATGGCTAATGGAACTTTTTGCGTCTGAATTTCCATCCGATATCCAC
CTGATTGAACAGTATGTGGCGCCTCTGCTTCATGGGACGCCCGAGTATGA
GCATATTCTGGAAAGCCTCCATGTCATGCGTGCGGCGGATGAAATACCTA
AACAGGTAAAGAGGCGCTCTTCCCAGCGGAGGCAAGTAAAATACTGCGTT
GGGCAGGTATTCAGGCATCGCCGGTATGATTACCGAGCCATCATAACAGG
TTGGGACACGGAGTGCGGCGCGGGTGAACAATGGATGAGAAGGATGGGAA
TAGATCGCTTACAGGGTGGTAGGCACCAGAGCTTCTATCATGTGCTGTAA
ATGGTTCCGTCTCTGGACTATTTCCCTGAAGAGTTGCTACATCAAATTCT
TTGCTACTGCCCACCCCGTTCCGCTGCCGCATTAGAACAGACAGCTCGCC
GGTTTCGCGGAGTAACAACACAGCCTTTACTATGGCGATATTATTGCCTG
AGCCATTTTAAGCACTGGGCCCGGCAACATGGGTTATCAGCGAAGCTTGC
AAGCCCTATCTCTGCGGTAGATTGGAAATCGCTTTACATACTAAGGCATC
TAAAATACCGCGCGACCTGTCATCTTCTGGACAGTATCCTTGCAAATCAA
GCTGGAAGAATCGATAAGGTTCGAAAGATTATAGGGCTTGGTTATGATGC
TAAAGATGCCCTTCTACATAATCTTGAGATTGATTCCAATGTAGAAGATT
ACTTGGCAAGGAGATACTATGCCGAGGCGCTCCTCACTTGCCTTCATCGA
AGTCTCGCTGTACAAGAATGGGCTAAACTGAGAAATGGCGAGGAGGTGTC
TCTAGACAGGGCATTAGGTGCATTCGACCTTTTTAGACCGAAGAGCGACT
TCGGCAATTTAGAAGAGATAAGCGATAGACTGGACTCGATTGCCTCGCTA
CTTTCAATCAATTGTCCAGACATCCACAAGCTCACGTCTCGTAATAAAGC
CAGGGCGGTTGCGAAGTTCCTGAGGGCAAATAATTTCACCGGAATTGGTG
AAGAAAAAGAGTACCATTGCTTGGAGCATAACTTTCTTGGTGTTGCTTTG
AATGACCCTCAGCACAACTCACTTCCTCTAATTTCGGCAACTATTTACTG
CTATGTTGCTGAACGAATCGGCCTGAACGCCCGGCCATGCGGGTTTCCTT
TTCATGTCCATGTAATTATCATGCCGCCCATCGGCTATGATATTGACGAT
AATGTAATTGAAGACGGGACACGGGGCAGCCCAATCTATATGGATCCGTT
CCGCTCAGAGAAGGAAACACCAATCACGGATCTAGAGTATCAACTGAACT
TCTTAGGTGTCACTGCGGTCGAGCGAGCGAACTTCTTGGCCGAATCCCAC
CCTTCAGAGGTCGTCCTTCGGTGCAGCAAGAATATTCTGAACTCGGTCCA
ACGCATGACTCGGTTTCCTGATATGCGCCTATCACCAGTGGAGGTGGTTT
GTGCGAAGTATGCTGCCATTTGGTCCTCTTTGTTGCTTTCGGATCTTGCC
CGGCCCACCGACATCAGACATAATCTCCTATGGCTAATGGAACTTTTTGC
GTCTGAATTTCCATCCGATATCCACCTGATTGAACAGTATGTGGCGCCTC
TGCTTCATGGGACGCCCGAGTATGAGCATATTCTGGAAAGCCTCCATGTC
ATGCGTGCGGCGGATGAAATACCTAAACAGGTAAAGAGGCGCTCTTCCCA
GCGGAGGCAAGTAAAATACTGCGTTGGGCAGGTATTCAGGCATCGCCGGT
ATGATTACCGAGCCATCATAACAGGTTGGGACACGGAGTGCGGCGCGGGT
GAACAATGGATGAGAAGGATGGGAATAGATCGCTTACAGGGTGGTAGGCA
CCAGAGCTTCTATCATGTGCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53116ASPNIDRAFT_53116Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53116-T1.exon1ASPNIDRAFT_53116-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53116-T1.exon2ASPNIDRAFT_53116-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53116-T1.exon3ASPNIDRAFT_53116-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53116-T1.cdsASPNIDRAFT_53116-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53116-T1ASPNIDRAFT_53116-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR011722
DBxrefInterPro:IPR036623
DBxrefInterPro:IPR032698
DBxrefPFAM:PF08755
DBxrefPFAM:PF13369
DBxrefPFAM:PF12937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2801817..2803500 +
Powered by Drupal