You are here

Home

ASPNIDRAFT_53176-T1, ASPNIDRAFT_53176-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53176-T1
Unique NameASPNIDRAFT_53176-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:2004598..2006147+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53176-T1 ID=ASPNIDRAFT_53176-T1|Name=ASPNIDRAFT_53176-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1550bp|location=Sequence derived from alignment at ACJE01000009.1:2004598..2006147+ (Aspergillus niger ATCC 1015)
CTTACATCTTGCACGGTCCCCCGTCGTCGTCAAGATATCTTGCTGATCCG
GCCAGCAGTGCTGTGCGCATCATTTTCTTTTTACCTCCTCCCCTTCCCCT
CTCCGTGGTTTCATATATATTCATCTCCCTCCACCGTCCAGCTAGCTGGA
TTGCTCTTTGATCTTAAACCATTATAATCAATCTCCCTCCTATACCTTTT
GATCCTTGATCGGATTATCTCCTCCCGATAATCATCATGTCTGCTGAACA
CCCTATTGAGAAGGATATGGCTCCTGAGAACGGCAGCAATGGCAGTGCTC
CCTTGACCCACGAGTTGACCGCTGAGGAAACCGCCAGAGCTGCTGCGCGT
TTCGGCTACGGACCCATGGCTCACGTCAACACCAAGGAGGCCAACCTGCG
CCCCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAAGTCGGTCGAGCAGC
GCAAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCGCTTTCGCCCTCACC
ACTTTCCTCCTGAGTTTGATCAACATGGGAACCCGTGGTATCTCTGCGAA
CAACATTGTCGTTGGTCTGGCTTTCGGATATGGTGGTCTCGTTCAGTTGC
TTGCTGGCATGTGGTAGGTACACCCCGTTACCACAACTCCCAAGATGAAT
TATGCTGATCGTTATTGATAGGGAAATGGCTGTCGGAAACACCTTCGGTG
CCACTGCTCTGTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCCATTGTC
TTGACCCCCGGTGGGTTCGAGATCGAGTCGTCGATTGAATCCGCCGGTGG
CGCCACCATGTTCTACAACTCAATGGGACTGTACCTGCTGGTAAGTTTTG
AGCAATGGCTGGGAGAGTGAGCATCGCGCTAACTGTCCTCCTTAGGGCTG
GTTCATCTTCACCACTATCCTGCTGTTCTGCACCTTGAGGTCCACTGTCG
CCTTCTTCTGCCTCTTCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGGT
GTTGGTTACCTGCAGCGGAACTCTGCTGGCGAGCCCAACACTCCCGTCAT
CAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTACA
ACGCCCTGGCTGGTATTGCCGACAGCAGCAACAGCTTCTTCATCATCCCT
GTTGCTCACTTCCCCTGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCCC
TCGTGAGACCGTCTAAGCCAGTCGCGTGGGTCCAGGCCATCGACATGGTC
GCGATGAAAAGAGCCTCTTGAAAGAAAGAGTAATACACCTGCAGTTGTTA
TGTTTCAGATACCCATTCTAGTAAGGCCATTGCTGTGCGGGGAATGGTCC
AGGTTGTAGACCATTTGAGAGGGTCTTGTGAAGACATGCAAGCCCTCTGC
AGCGGGTCCAAACAATCCAGAGCAGTGTTTTGTTTATTGTGTTGGTTTCC
ATTGGGATATATAATATCGGAACCTGGGTTAATAATGATGGAGCAGTTCG
TCGTCGAGCGCGACGGATATGGGACGCGTTGGTTTTGGATGTTTAGTTTC
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:2004598..2006147+

>ASPNIDRAFT_53176-T1 ID=ASPNIDRAFT_53176-T1|Name=ASPNIDRAFT_53176-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2601bp|location=Sequence derived from alignment at ACJE01000009.1:2004598..2006147+ (Aspergillus niger ATCC 1015)
ATGTCTGCTGAACACCCTATTGAGAAGGATATGGCTCCTGAGAACGGCAG
CAATGGCAGTGCTCCCTTGACCCACGAGTTGACCGCTGAGGAAACCGCCA
GAGCTGCTGCGCGTTTCGGCTACGGACCCATGGCTCACGTCAACACCAAG
GAGGCCAACCTGCGCCCCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAA
GTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCG
CTTTCGCCCTCACCACTTTCCTCCTGAGTTTGATCAACATGGGAACCCGT
GGTATCTCTGCGAACAACATTGTCGTTGGTCTGGCTTTCGGATATGGTGG
TCTCGTTCAGTTGCTTGCTGGCATGTGGGAAATGGCTGTCGGAAACACCT
TCGGTGCCACTGCTCTGTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCC
ATTGTCTTGACCCCCGGTGGGTTCGAGATCGAGTCGTCGATTGAATCCGC
CGGTGGCGCCACCATGTTCTACAACTCAATGGGACTGTACCTGCTGGGCT
GGTTCATCTTCACCACTATCCTGCTGTTCTGCACCTTGAGGTCCACTGTC
GCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGG
TGTTGGTTACCTGCAGCGGAACTCTGCTGGCGAGCCCAACACTCCCGTCA
TCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTAC
AACGCCCTGGCTGGTATTGCCGACAGCAGCAACAGCTTCTTCATCATCCC
TGTTGCTCACTTCCCCTGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCC
CTCGTGAGACCGTCTAAATGTCTGCTGAACACCCTATTGAGAAGGATATG
GCTCCTGAGAACGGCAGCAATGGCAGTGCTCCCTTGACCCACGAGTTGAC
CGCTGAGGAAACCGCCAGAGCTGCTGCGCGTTTCGGCTACGGACCCATGG
CTCACGTCAACACCAAGGAGGCCAACCTGCGCCCCTTCGGAGGTGAATTC
CAGCCTGGTCTGTACAAGTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGC
GCCTCTGGGTCTCTGCGCTTTCGCCCTCACCACTTTCCTCCTGAGTTTGA
TCAACATGGGAACCCGTGGTATCTCTGCGAACAACATTGTCGTTGGTCTG
GCTTTCGGATATGGTGGTCTCGTTCAGTTGCTTGCTGGCATGTGGGAAAT
GGCTGTCGGAAACACCTTCGGTGCCACTGCTCTGTCCTCCTACGGAGGTT
TCTGGATCTCTTTCGCCATTGTCTTGACCCCCGGTGGGTTCGAGATCGAG
TCGTCGATTGAATCCGCCGGTGGCGCCACCATGTTCTACAACTCAATGGG
ACTGTACCTGCTGGGCTGGTTCATCTTCACCACTATCCTGCTGTTCTGCA
CCTTGAGGTCCACTGTCGCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTG
ACCTTCTTGCTGCTTGGTGTTGGTTACCTGCAGCGGAACTCTGCTGGCGA
GCCCAACACTCCCGTCATCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTG
CATTCGCCGCTTGGTACAACGCCCTGGCTGGTATTGCCGACAGCAGCAAC
AGCTTCTTCATCATCCCTGTTGCTCACTTCCCCTGGTCTCCCACTGCCCG
TAGCCGTGCTAAGACCCCTCGTGAGACCGTCTAAATGTCTGCTGAACACC
CTATTGAGAAGGATATGGCTCCTGAGAACGGCAGCAATGGCAGTGCTCCC
TTGACCCACGAGTTGACCGCTGAGGAAACCGCCAGAGCTGCTGCGCGTTT
CGGCTACGGACCCATGGCTCACGTCAACACCAAGGAGGCCAACCTGCGCC
CCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAAGTCGGTCGAGCAGCGC
AAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCGCTTTCGCCCTCACCAC
TTTCCTCCTGAGTTTGATCAACATGGGAACCCGTGGTATCTCTGCGAACA
ACATTGTCGTTGGTCTGGCTTTCGGATATGGTGGTCTCGTTCAGTTGCTT
GCTGGCATGTGGGAAATGGCTGTCGGAAACACCTTCGGTGCCACTGCTCT
GTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCCATTGTCTTGACCCCCG
GTGGGTTCGAGATCGAGTCGTCGATTGAATCCGCCGGTGGCGCCACCATG
TTCTACAACTCAATGGGACTGTACCTGCTGGGCTGGTTCATCTTCACCAC
TATCCTGCTGTTCTGCACCTTGAGGTCCACTGTCGCCTTCTTCTGCCTCT
TCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGGTGTTGGTTACCTGCAG
CGGAACTCTGCTGGCGAGCCCAACACTCCCGTCATCAAGGCGGGTGGTTT
CTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTACAACGCCCTGGCTGGTA
TTGCCGACAGCAGCAACAGCTTCTTCATCATCCCTGTTGCTCACTTCCCC
TGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCCCTCGTGAGACCGTCTA
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53176ASPNIDRAFT_53176Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53176-T1ASPNIDRAFT_53176-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53176-T1.utr5p1ASPNIDRAFT_53176-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53176-T1.exon1ASPNIDRAFT_53176-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53176-T1.exon2ASPNIDRAFT_53176-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53176-T1.exon3ASPNIDRAFT_53176-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53176-T1.cdsASPNIDRAFT_53176-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53176-T1.utr3p1ASPNIDRAFT_53176-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:2004598..2006147 +
Powered by Drupal