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ASPNIDRAFT_53233-T1, ASPNIDRAFT_53233-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53233-T1
Unique NameASPNIDRAFT_53233-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1528021..1529325+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53233-T1 ID=ASPNIDRAFT_53233-T1|Name=ASPNIDRAFT_53233-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1305bp|location=Sequence derived from alignment at ACJE01000009.1:1528021..1529325+ (Aspergillus niger ATCC 1015)
CTTCATTTCACCTCCCCTCCCTCTGTCTCTCATTATCTTACCATCTCCTA
CTTCTTTCTCTATATACACGCTCACAATGGTCATCAAAGGCACCCAATTG
GATGGCGTTGCCCTCGTCGTCGGCGTAAGAACTACCCCAACCATCATCAT
CATCACCACAGTATTATCTCCAAGAAAGATCACCTCCCAGCTAACCTCCA
AGAAATCCAGTCCGGCCGTGGCATTGGCCAACAAGCCGCCTTCTCTTTAG
CTGAAGCAGGCGCCCGTGTCATCGTCTTCGCCGACATGAACACCGAAACA
GCCACTGCCTCTGCCGAAGAGAGCAAGCAATACGCCACGAACCCAGAATA
CCAATCCACTCACTTCACTGTCAACGTCACCGACCAAGACGGCGTGCAAG
CCATGGTTGACTTTATAGTCGAGAAGTTCGGACGGCTGGACTATGCCGTA
AACGCTGCAGGAGTGAGTCCCATCCACCTCCACTCATCCACCATCATCCC
TAAAGGATATCTACAACAACCTAGAACATAGTACTCTCCCACCAGACTAA
CTCAAAAGAACTAGGTCGACAACGGCGTCCACACCCCCTTCGCCGATACC
GACATCGACAACTTCGACCGCGTCCAGACCATCAACGCCCGCGGTATGTT
CCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGCAAGCAGGCCTCGCGCA
CCTTCACCAGCCGCACCGGCACCCGAGACATTGGCCGCGGCGCCATTGTA
AACGTCTGCTCAGCCAACTCTTTCGCCGGACTGCCTGGGAAGGGATCGTA
TACCGTCTCCAAGCATGCTTGCATGGCAGTGACGAAGATGGTTGGTAAGT
TTCTTCTTTTTCCCCTACCTACATACATACATTATGCAAATTCATTTTCT
CTCTAATATATGTTTCACTTCAGGACTGGATCACTCCGCCGAAGGCATCC
GCTGCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTC
GAGTTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACC
AATTAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATT
TGCTTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGAT
GCGGCGGTGACGGCGACCTTGAGGTTTCATTGATTACTTGCTATATATGC
CTGGCAGTTAAGGCGGGAGGCTGAGGGCTCTATGAACATGATAGTAGATC
TAATTATGGGGAGGTAGAAGAGTATGATCAATAAGAAGGGATTTTCGCTT
TGATA
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Coding sequence (CDS) from alignment at ACJE01000009.1:1528021..1529325+

>ASPNIDRAFT_53233-T1 ID=ASPNIDRAFT_53233-T1|Name=ASPNIDRAFT_53233-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3360bp|location=Sequence derived from alignment at ACJE01000009.1:1528021..1529325+ (Aspergillus niger ATCC 1015)
ATGGTCATCAAAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCTC
CGGCCGTGGCATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCG
CCCGTGTCATCGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCT
GCCGAAGAGAGCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCA
CTTCACTGTCAACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACT
TTATAGTCGAGAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGA
GTCGACAACGGCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTT
CGACCGCGTCCAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCG
CCGAAGCCGCCGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGC
ACCGGCACCCGAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGC
CAACTCTTTCGCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGC
ATGCTTGCATGGCAGTGACGAAGATGGTTGGACTGGATCACTCCGCCGAA
GGCATCCGCTGCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCT
GGACGTCGAGTTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCG
TTATACCAATTAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATT
GTTTATTTGCTTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTT
GTTGGATGCGGCGGTGACGGCGACCTTGAGGTTTCATTGAATGGTCATCA
AAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCTCCGGCCGTGGC
ATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCAT
CGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGA
GCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTC
AACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGA
GAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGAGTCGACAACG
GCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTC
CAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGC
CGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCC
GAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTC
GCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCAT
GGCAGTGACGAAGATGGTTGGACTGGATCACTCCGCCGAAGGCATCCGCT
GCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTCGAG
TTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACCAAT
TAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATTTGC
TTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGATGCG
GCGGTGACGGCGACCTTGAGGTTTCATTGAATGGTCATCAAAGGCACCCA
ATTGGATGGCGTTGCCCTCGTCGTCGGCTCCGGCCGTGGCATTGGCCAAC
AAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTCTTCGCC
GACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAAGCAATA
CGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTCAACGTCACCG
ACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGAGAAGTTCGGA
CGGCTGGACTATGCCGTAAACGCTGCAGGAGTCGACAACGGCGTCCACAC
CCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTCCAGACCATCA
ACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGC
AAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCCGAGACATTGG
CCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTCGCCGGACTGC
CTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCATGGCAGTGACG
AAGATGGTTGGACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGT
GTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGA
ACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCA
GCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTC
GGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGG
CGACCTTGAGGTTTCATTGAATGGTCATCAAAGGCACCCAATTGGATGGC
GTTGCCCTCGTCGTCGGCTCCGGCCGTGGCATTGGCCAACAAGCCGCCTT
CTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTCTTCGCCGACATGAACA
CCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAAGCAATACGCCACGAAC
CCAGAATACCAATCCACTCACTTCACTGTCAACGTCACCGACCAAGACGG
CGTGCAAGCCATGGTTGACTTTATAGTCGAGAAGTTCGGACGGCTGGACT
ATGCCGTAAACGCTGCAGGAGTCGACAACGGCGTCCACACCCCCTTCGCC
GATACCGACATCGACAACTTCGACCGCGTCCAGACCATCAACGCCCGCGG
TATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGCAAGCAGGCCT
CGCGCACCTTCACCAGCCGCACCGGCACCCGAGACATTGGCCGCGGCGCC
ATTGTAAACGTCTGCTCAGCCAACTCTTTCGCCGGACTGCCTGGGAAGGG
ATCGTATACCGTCTCCAAGCATGCTTGCATGGCAGTGACGAAGATGGTTG
GACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGTGTGCCCCATC
TGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGAACCCCCAGGT
GCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCAGCTGAGAGTG
ATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTCGGCAAGTTAT
GTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGGCGACCTTGAG
GTTTCATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53233ASPNIDRAFT_53233Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53233-T1ASPNIDRAFT_53233-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53233-T1.utr5p1ASPNIDRAFT_53233-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53233-T1.exon1ASPNIDRAFT_53233-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53233-T1.exon2ASPNIDRAFT_53233-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53233-T1.exon3ASPNIDRAFT_53233-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53233-T1.exon4ASPNIDRAFT_53233-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53233-T1.cdsASPNIDRAFT_53233-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53233-T1.utr3p1ASPNIDRAFT_53233-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1528021..1529325 +
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