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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:1044125..1046013- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53278-T1 ID=ASPNIDRAFT_53278-T1|Name=ASPNIDRAFT_53278-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1889bp|location=Sequence derived from alignment at ACJE01000009.1:1044125..1046013- (Aspergillus niger ATCC 1015)
ATGACCTCTACGCCGGGGATGGATAATCTAGGGCCGGCCTCTGTGGGTGG
CGGAATCAGTGGTATCGCTCTTGGCGTGGCCAATTCTCATAATCGCCAGA
GTGGAGTTGACGCTTTTAGGGAAACAGATGTGCCAGTACGCAATCTCCCC
GCAGAACGGGATTTCAACACCACCGGCTCCGATAACCCCTATATACCTGC
TCCGCCAGATGGAGACATATATCCCAGTTCAGAGGCGGTGAGGTATCGCG
ACTCTTACAGCTCGCATACCGGGCTTGGTGCTGGCGCGCCTTTTGCCGAA
CATAGCACGCCGGGCACGACGCCATCCCAACGTAGTTTCTTCGATAGTCC
GTACCAAGGCGTGGATGCTGGACCGTACCAGCGGCACTCGGCTTATAGTT
CTCACGACTACCCGCTGGTCATCAATCCGGATGACATTGCTGACGACGGC
GATGATGGTTTCCCAGTCCACCCGAAGGGAGCAGCGGACTACAGATCGAA
CGCTAACGTACCTGGTACAGGTGTCGCCGGCGCAGCGGCTGCTGGGGGGT
TTCTTGGGAAATTTCGGGCGCTGTTTAAGAGAGAAGAACCTAGTCCCTTC
TACGATTCAGACATTGGAGGTGGTCTGGGAGGAGCCGAAAAGGCACAAGG
CGGTAGGCACATTATTGGAGGAGGCAGCCGTAAGCGCGGTTGGATTGTTG
GGCTCATATTGGCGGCGGTTATCGTGGCAGCTATTGTTGGGGGCGCTGTC
GGCGGTATTCTGGGCCATCAGGAACACGACGGTGATACATCGTCGTCGTC
ATCATCATCATCATCATCATCAGGCACAGGGTCTGGTGGTTCGGACAAAG
GTGATGGGTTGCTTGACAAGGATTCCGACGAGATCAAAGCACTCATGAAC
AACAAGAACCTCCACAAAGTGTTTCCTGGTGTCGACTATACCCCGTGGGG
AGTGCAGTATCCACTGTGCCTCCAATATCCTCCGTCGCAGAATAACGTTA
CGCGCGACCTGGCGGTGCTTACGCAGTTGACTAATACTATCAGGCTCTAC
GGCACCGACTGCAATCAGACCGAAATGGTCCTCGAGGCTATTGACCGCTT
GCAGTTGACTAATATGAAGCTCTGGCTGGGCGTGTGGATTGATACCAATA
CAACGACTACGGATCGCCAGATCAGCCAATTGTATAAGATCGTGGAAAAT
GCGAACGACACCTCTATTTTCAAAGGAGCTATTGTCGGTAATGAAGCCCT
CTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAAACGAATCTGATCGGCT
ACATTAACGATGTCAAAGACCACTTCAAAGACAAGAATATTGACCTCCCA
GTGGGCACCTCAGACTTGGGCGACAATTGGAATGCACAGCTAGTCAGCGC
GGCCGACTTTGTCATGTCGAACATTCATCCGTTCTTCGGAGGAGTAGAGA
TTGACGACGCTGCCAGCTGGACATGGACGTTTTGGCAGACGCATGACACC
CCACTCACAGCGGGAACGAACAAACAGCAGATCATATCAGAGGTGGGATG
GCCGACGGGAGGAGGGAACGACTGTGGGTCCGACAACAAGTGTCAGAATG
ACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCTGAACCAGTTCCTGTCG
GAGTGGGTTTGTCAGGCTTTGGACAATGGTACAGAGTACTTCTGGTATGT
TCGCAGATATCCTCATTGGTAAGACTCGGCTAAAACATGCGCAGGTTTGA
AGCTTTCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGGTCAGGAGT
GGGAAGACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGAAGCCGGGC
GTCAAGATCCCCGATTGTGGCGGCAAGACGATTACGTGA back to topCoding sequence (CDS) from alignment at ACJE01000009.1:1044125..1046013- >ASPNIDRAFT_53278-T1 ID=ASPNIDRAFT_53278-T1|Name=ASPNIDRAFT_53278-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3678bp|location=Sequence derived from alignment at ACJE01000009.1:1044125..1046013- (Aspergillus niger ATCC 1015)
GTTTGAAGCTTTCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGGTC
AGGAGTGGGAAGACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGAAG
CCGGGCGTCAAGATCCCCGATTGTGGCGGCAAGACGATTACGTGAATGAC
CTCTACGCCGGGGATGGATAATCTAGGGCCGGCCTCTGTGGGTGGCGGAA
TCAGTGGTATCGCTCTTGGCGTGGCCAATTCTCATAATCGCCAGAGTGGA
GTTGACGCTTTTAGGGAAACAGATGTGCCAGTACGCAATCTCCCCGCAGA
ACGGGATTTCAACACCACCGGCTCCGATAACCCCTATATACCTGCTCCGC
CAGATGGAGACATATATCCCAGTTCAGAGGCGGTGAGGTATCGCGACTCT
TACAGCTCGCATACCGGGCTTGGTGCTGGCGCGCCTTTTGCCGAACATAG
CACGCCGGGCACGACGCCATCCCAACGTAGTTTCTTCGATAGTCCGTACC
AAGGCGTGGATGCTGGACCGTACCAGCGGCACTCGGCTTATAGTTCTCAC
GACTACCCGCTGGTCATCAATCCGGATGACATTGCTGACGACGGCGATGA
TGGTTTCCCAGTCCACCCGAAGGGAGCAGCGGACTACAGATCGAACGCTA
ACGTACCTGGTACAGGTGTCGCCGGCGCAGCGGCTGCTGGGGGGTTTCTT
GGGAAATTTCGGGCGCTGTTTAAGAGAGAAGAACCTAGTCCCTTCTACGA
TTCAGACATTGGAGGTGGTCTGGGAGGAGCCGAAAAGGCACAAGGCGGTA
GGCACATTATTGGAGGAGGCAGCCGTAAGCGCGGTTGGATTGTTGGGCTC
ATATTGGCGGCGGTTATCGTGGCAGCTATTGTTGGGGGCGCTGTCGGCGG
TATTCTGGGCCATCAGGAACACGACGGTGATACATCGTCGTCGTCATCAT
CATCATCATCATCATCAGGCACAGGGTCTGGTGGTTCGGACAAAGGTGAT
GGGTTGCTTGACAAGGATTCCGACGAGATCAAAGCACTCATGAACAACAA
GAACCTCCACAAAGTGTTTCCTGGTGTCGACTATACCCCGTGGGGAGTGC
AGTATCCACTGTGCCTCCAATATCCTCCGTCGCAGAATAACGTTACGCGC
GACCTGGCGGTGCTTACGCAGTTGACTAATACTATCAGGCTCTACGGCAC
CGACTGCAATCAGACCGAAATGGTCCTCGAGGCTATTGACCGCTTGCAGT
TGACTAATATGAAGCTCTGGCTGGGCGTGTGGATTGATACCAATACAACG
ACTACGGATCGCCAGATCAGCCAATTGTATAAGATCGTGGAAAATGCGAA
CGACACCTCTATTTTCAAAGGAGCTATTGTCGGTAATGAAGCCCTCTATC
GAGCAGGCTCGGACGTGGCGAGTGCAGAAACGAATCTGATCGGCTACATT
AACGATGTCAAAGACCACTTCAAAGACAAGAATATTGACCTCCCAGTGGG
CACCTCAGACTTGGGCGACAATTGGAATGCACAGCTAGTCAGCGCGGCCG
ACTTTGTCATGTCGAACATTCATCCGTTCTTCGGAGGAGTAGAGATTGAC
GACGCTGCCAGCTGGACATGGACGTTTTGGCAGACGCATGACACCCCACT
CACAGCGGGAACGAACAAACAGCAGATCATATCAGAGGTGGGATGGCCGA
CGGGAGGAGGGAACGACTGTGGGTCCGACAACAAGTGTCAGAATGACAAG
CAGGGCGCCGTGGCGGGCATCGATGAGCTGAACCAGTTCCTGTCGGAGTG
GGTTTGTCAGGCTTTGGACAATGGTACAGAGTACTTCTGGTTTGAAGCTT
TCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGGTCAGGAGTGGGAA
GACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGAAGCCGGGCGTCAA
GATCCCCGATTGTGGCGGCAAGACGATTACGTGAATGACCTCTACGCCGG
GGATGGATAATCTAGGGCCGGCCTCTGTGGGTGGCGGAATCAGTGGTATC
GCTCTTGGCGTGGCCAATTCTCATAATCGCCAGAGTGGAGTTGACGCTTT
TAGGGAAACAGATGTGCCAGTACGCAATCTCCCCGCAGAACGGGATTTCA
ACACCACCGGCTCCGATAACCCCTATATACCTGCTCCGCCAGATGGAGAC
ATATATCCCAGTTCAGAGGCGGTGAGGTATCGCGACTCTTACAGCTCGCA
TACCGGGCTTGGTGCTGGCGCGCCTTTTGCCGAACATAGCACGCCGGGCA
CGACGCCATCCCAACGTAGTTTCTTCGATAGTCCGTACCAAGGCGTGGAT
GCTGGACCGTACCAGCGGCACTCGGCTTATAGTTCTCACGACTACCCGCT
GGTCATCAATCCGGATGACATTGCTGACGACGGCGATGATGGTTTCCCAG
TCCACCCGAAGGGAGCAGCGGACTACAGATCGAACGCTAACGTACCTGGT
ACAGGTGTCGCCGGCGCAGCGGCTGCTGGGGGGTTTCTTGGGAAATTTCG
GGCGCTGTTTAAGAGAGAAGAACCTAGTCCCTTCTACGATTCAGACATTG
GAGGTGGTCTGGGAGGAGCCGAAAAGGCACAAGGCGGTAGGCACATTATT
GGAGGAGGCAGCCGTAAGCGCGGTTGGATTGTTGGGCTCATATTGGCGGC
GGTTATCGTGGCAGCTATTGTTGGGGGCGCTGTCGGCGGTATTCTGGGCC
ATCAGGAACACGACGGTGATACATCGTCGTCGTCATCATCATCATCATCA
TCATCAGGCACAGGGTCTGGTGGTTCGGACAAAGGTGATGGGTTGCTTGA
CAAGGATTCCGACGAGATCAAAGCACTCATGAACAACAAGAACCTCCACA
AAGTGTTTCCTGGTGTCGACTATACCCCGTGGGGAGTGCAGTATCCACTG
TGCCTCCAATATCCTCCGTCGCAGAATAACGTTACGCGCGACCTGGCGGT
GCTTACGCAGTTGACTAATACTATCAGGCTCTACGGCACCGACTGCAATC
AGACCGAAATGGTCCTCGAGGCTATTGACCGCTTGCAGTTGACTAATATG
AAGCTCTGGCTGGGCGTGTGGATTGATACCAATACAACGACTACGGATCG
CCAGATCAGCCAATTGTATAAGATCGTGGAAAATGCGAACGACACCTCTA
TTTTCAAAGGAGCTATTGTCGGTAATGAAGCCCTCTATCGAGCAGGCTCG
GACGTGGCGAGTGCAGAAACGAATCTGATCGGCTACATTAACGATGTCAA
AGACCACTTCAAAGACAAGAATATTGACCTCCCAGTGGGCACCTCAGACT
TGGGCGACAATTGGAATGCACAGCTAGTCAGCGCGGCCGACTTTGTCATG
TCGAACATTCATCCGTTCTTCGGAGGAGTAGAGATTGACGACGCTGCCAG
CTGGACATGGACGTTTTGGCAGACGCATGACACCCCACTCACAGCGGGAA
CGAACAAACAGCAGATCATATCAGAGGTGGGATGGCCGACGGGAGGAGGG
AACGACTGTGGGTCCGACAACAAGTGTCAGAATGACAAGCAGGGCGCCGT
GGCGGGCATCGATGAGCTGAACCAGTTCCTGTCGGAGTGGGTTTGTCAGG
CTTTGGACAATGGTACAGAGTACTTCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH17 |
| DBxref | InterPro:IPR017853 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:1044125..1046013 - |
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