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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:264295..265561+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53400-T1 ID=ASPNIDRAFT_53400-T1|Name=ASPNIDRAFT_53400-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1267bp|location=Sequence derived from alignment at ACJE01000008.1:264295..265561+ (Aspergillus niger ATCC 1015)
CCCAGATACCCCCCCTCTGCACATCATGATTTCCATCGGTCTGGAGAGCT
CCGCCAACAAACTGGGCGTGGGCATCATGGTGCATCCCGACGATGGCAAG
CCCCCGCAGGTGCTGGCCAATGTTCGGCACACCTATGTCACCCCTCCGGG
TGAAGGATTCCTTCCCAAGGACACCGCCCGTCACCACCGCGCCTGGGTCG
TGAAGCTGGTCAAGAAGGCTCTTCGTGAAGCTCGGATCTCCCCCAAGGAT
GTGGATTGCATCTGCTTCACCAAGGGCCCCGGCATGGGAGCCCCTCTTCA
GAGCGCCGCCATTGCGGCCCGCATGTTGAGTCTACTATGGGGCAAGGAAT
TGGTGGGCGTGAATCACTGTGTTGGACGTATGTGTTATGCCTAGTACTTG
ATCGGTTTATTTATCTATCAGTCCCCTATCCTATCTGCACCGTGCGGGGA
ACCCTTTTGCCCCTTCTCATCCCTTGCATAGCTTGGCCCTCCTATTGCAA
CCATCGCTGACAATGTCCCGGTTGTATATATAGATATTGAAATGGGTCGA
TTGATTACCGGTGCTACAAATCCCGTCGTCCTCTACGTCTCCGGAGGAAA
TACCCAAGTCATCGCATACAGCTCTCAACGGTACCGCATCTTCGGCGAGA
CCTTGGATATCGCAGTAGGAAACTGCTTAGACCGCTTTGCGCGCACGCTG
CGCATTTCCAACGATCCCGCCCCAGGATATAACATCGAACAATTAGCCAA
GAAGGGTAGGAAACTGGTCGATCTACCGTACACGGTCAAGGGAATGGACA
TTTCCATGTCCGGTATCTTGGCGGCCATTGATGGACTAGCAGTGCAGTAT
GGCTTGGACGGAGACTGGAATGACGACGAGGATGTTGCTAACAATGCATC
TACATCGGACGATCTGGAGAACGCGAAACCGACGCGTGCAGATCTATGCT
TCTCGCTCCAGGAAACGGTTTACTCCATGCTGGTCGAGATCACAGAGCGC
GCCATGGCACATGTCGGCTCCAAGGATGTTCTGATCGTCGGTGGAGTGGG
CTGTAATGAGCGCCTGCAGGAAATGATGGGCATCATGGCTCGCGACCGCG
GCGGTACCATTCATGCGACCGACGAGAGGTTCTGTATTGATAACGGCATC
ATGATCGCGCAGGCTGGATTACTGGCATATAAGTCCGGTAGCACAACGCC
CTTGAAGGATTCCACTTGTACTCAGCGCTTCCGGACGGACGATGTCTTTG
TCAAATGGAGGGATTGA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:264295..265561+ >ASPNIDRAFT_53400-T1 ID=ASPNIDRAFT_53400-T1|Name=ASPNIDRAFT_53400-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2172bp|location=Sequence derived from alignment at ACJE01000008.1:264295..265561+ (Aspergillus niger ATCC 1015)
ATGATTTCCATCGGTCTGGAGAGCTCCGCCAACAAACTGGGCGTGGGCAT
CATGGTGCATCCCGACGATGGCAAGCCCCCGCAGGTGCTGGCCAATGTTC
GGCACACCTATGTCACCCCTCCGGGTGAAGGATTCCTTCCCAAGGACACC
GCCCGTCACCACCGCGCCTGGGTCGTGAAGCTGGTCAAGAAGGCTCTTCG
TGAAGCTCGGATCTCCCCCAAGGATGTGGATTGCATCTGCTTCACCAAGG
GCCCCGGCATGGGAGCCCCTCTTCAGAGCGCCGCCATTGCGGCCCGCATG
TTGAGTCTACTATGGGGCAAGGAATTGGTGGGCGTGAATCACTGTGTTGG
ACATATTGAAATGGGTCGATTGATTACCGGTGCTACAAATCCCGTCGTCC
TCTACGTCTCCGGAGGAAATACCCAAGTCATCGCATACAGCTCTCAACGG
TACCGCATCTTCGGCGAGACCTTGGATATCGCAGTAGGAAACTGCTTAGA
CCGCTTTGCGCGCACGCTGCGCATTTCCAACGATCCCGCCCCAGGATATA
ACATCGAACAATTAGCCAAGAAGGGTAGGAAACTGGTCGATCTACCGTAC
ACGGTCAAGGGAATGGACATTTCCATGTCCGGTATCTTGGCGGCCATTGA
TGGACTAGCAGTGCAGTATGGCTTGGACGGAGACTGGAATGACGACGAGG
ATGTTGCTAACAATGCATCTACATCGGACGATCTGGAGAACGCGAAACCG
ACGCGTGCAGATCTATGCTTCTCGCTCCAGGAAACGGTTTACTCCATGCT
GGTCGAGATCACAGAGCGCGCCATGGCACATGTCGGCTCCAAGGATGTTC
TGATCGTCGGTGGAGTGGGCTGTAATGAGCGCCTGCAGGAAATGATGGGC
ATCATGGCTCGCGACCGCGGCGGTACCATTCATGCGACCGACGAGAGGTT
CTGTATTGATAACGGCATCATGATCGCGCAGGCTGGATTACTGGCATATA
AGTCCGGTAGCACAACGCCCTTGAAGGATTCCACTTGTACTCAGCGCTTC
CGGACGGACGATGTCTTTGTCAAATGGAGGGATTGAATGATTTCCATCGG
TCTGGAGAGCTCCGCCAACAAACTGGGCGTGGGCATCATGGTGCATCCCG
ACGATGGCAAGCCCCCGCAGGTGCTGGCCAATGTTCGGCACACCTATGTC
ACCCCTCCGGGTGAAGGATTCCTTCCCAAGGACACCGCCCGTCACCACCG
CGCCTGGGTCGTGAAGCTGGTCAAGAAGGCTCTTCGTGAAGCTCGGATCT
CCCCCAAGGATGTGGATTGCATCTGCTTCACCAAGGGCCCCGGCATGGGA
GCCCCTCTTCAGAGCGCCGCCATTGCGGCCCGCATGTTGAGTCTACTATG
GGGCAAGGAATTGGTGGGCGTGAATCACTGTGTTGGACATATTGAAATGG
GTCGATTGATTACCGGTGCTACAAATCCCGTCGTCCTCTACGTCTCCGGA
GGAAATACCCAAGTCATCGCATACAGCTCTCAACGGTACCGCATCTTCGG
CGAGACCTTGGATATCGCAGTAGGAAACTGCTTAGACCGCTTTGCGCGCA
CGCTGCGCATTTCCAACGATCCCGCCCCAGGATATAACATCGAACAATTA
GCCAAGAAGGGTAGGAAACTGGTCGATCTACCGTACACGGTCAAGGGAAT
GGACATTTCCATGTCCGGTATCTTGGCGGCCATTGATGGACTAGCAGTGC
AGTATGGCTTGGACGGAGACTGGAATGACGACGAGGATGTTGCTAACAAT
GCATCTACATCGGACGATCTGGAGAACGCGAAACCGACGCGTGCAGATCT
ATGCTTCTCGCTCCAGGAAACGGTTTACTCCATGCTGGTCGAGATCACAG
AGCGCGCCATGGCACATGTCGGCTCCAAGGATGTTCTGATCGTCGGTGGA
GTGGGCTGTAATGAGCGCCTGCAGGAAATGATGGGCATCATGGCTCGCGA
CCGCGGCGGTACCATTCATGCGACCGACGAGAGGTTCTGTATTGATAACG
GCATCATGATCGCGCAGGCTGGATTACTGGCATATAAGTCCGGTAGCACA
ACGCCCTTGAAGGATTCCACTTGTACTCAGCGCTTCCGGACGGACGATGT
CTTTGTCAAATGGAGGGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000408 | EKC/KEOPS complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0002949 | tRNA threonylcarbamoyladenosine modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926347W |
| DBxref | InterPro:IPR034680 |
| DBxref | InterPro:IPR000905 |
| DBxref | InterPro:IPR017861 |
| DBxref | PFAM:PF00814 |
| Product | putative tRNA threonylcarbamoyladenosine biosynthesis protein kae1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:264295..265561 + |
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