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ASPNIDRAFT_53525-T1, ASPNIDRAFT_53525-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53525-T1
Unique NameASPNIDRAFT_53525-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1619473..1620787-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53525-T1 ID=ASPNIDRAFT_53525-T1|Name=ASPNIDRAFT_53525-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1315bp|location=Sequence derived from alignment at ACJE01000008.1:1619473..1620787- (Aspergillus niger ATCC 1015)
TCGAGATCGATTTCGACCCGTACGACAACTCCCAGCGCCAGCCCGCGAGA
CGACGACAAGGTATGTGATATTGCTGTCAGCTGCTTGCCTGTTGCATGCT
AATTGAGAACAGATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAA
GCGTATGTCCTTTCTTTTCTCCCTGCTAGTCCCAGCCCAGTCCAGTTCCC
AGCCAGAGTACGATCCGTCGGTTGTCAGTCGTCCAGCAAGCATGAGGAAT
ATACACGGTGCGATGGAATGAGAAATCAGACGATCGGAGCGAACGAATCA
ATTGGTGCGAAAAAAAAAAATAACGACAACGAACGACGAATATGATCGGC
GAAGAAATTATCATAAGCGACCGAAATTTCGATTCGATCTGGACGAAGAT
ATTTTACCACCAACATGAATTGACAAGTGCTTGCTGGACCACGGACATAC
AGCCGGATTGAACTAAACCACATACACACATCATCAAGACGAACGACCCG
ACTAACATCAAACTCCTTCCAGGCACCAAGCGTTTCTGGCGCCACCAGTC
CGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCG
ACAACCGCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTCCATC
GGCTACGGATCCAACAAGAAGACCAAGCACATGATGCCCTCCGGCCACAA
GGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACA
ACCGCACCTACGCCGCTGAGTACGTTTCACCTGTCTTTCTGACATGACCT
CTATAACCACGGAATATACGATGCTAATAAAGAAAACAGGATCGCCAGCG
CCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGGCCAAGGCTCTC
GGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACCGAGGCTTAAAT
GGACATGGAATGAATGTAAAGAAAGCCCAAGAAATTTCATCATTTTCATT
TTCATTTTTCATTAAACTCTTTCCACTTATACCAACCAAATGGGAACCAA
CCACTTTCGGGGGACATAAAAAAGCAGCAACAGCAACTACTTCACTGTGG
TAGTGGAGTGGCTTGTTTGTTGTGATTGGGGACTTGCGGAGCCTTGAATC
ATCGCATCTTCTAATGTGGGCTTTGGCTTTGACGTTGACGACGTATGTGC
TGGATTGCAGCGTTTATGATGATTGATTTACATGCATGTGGGTCTTTTGT
CATGGCGCTTGTGGTCGTGGCTGGTGCTGCCAGTCTGGGAATAAAAATTC
AAATCTTATGAAGAC
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Coding sequence (CDS) from alignment at ACJE01000008.1:1619473..1620787-

>ASPNIDRAFT_53525-T1 ID=ASPNIDRAFT_53525-T1|Name=ASPNIDRAFT_53525-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1188bp|location=Sequence derived from alignment at ACJE01000008.1:1619473..1620787- (Aspergillus niger ATCC 1015)
GATCGCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGG
CCAAGGCTCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACC
GAGGCTTAAGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTCAAG
TGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGTCCG
TAGACGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTACGGATCCA
ACAAGAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTCGTC
CACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTACGC
CGCTGAATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGCGATC
GCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGGCCAA
GGCTCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACCGAGG
CTTAAGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTCAAGTGCG
TGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGTCCGTAGA
CGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTACGGATCCAACAA
GAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTCGTCCACA
ACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTACGCCGCT
GAATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGCGATCGCCA
GCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGGCCAAGGCT
CTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACCGAGGCTTA
AGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTCAAGTGCGTGCC
GGAGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGTCCGTAGACGCT
TCCGTGGCAACATCCCCATGCCCTCCATCGGCTACGGATCCAACAAGAAG
ACCAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTCGTCCACAACCC
CAAGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTACGCCGCTGAAT
GGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP63ASPNIDRAFT_53525Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53525-T1ASPNIDRAFT_53525-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53525-T1.cdsASPNIDRAFT_53525-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53525-T1.utr3p1ASPNIDRAFT_53525-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53525-T1.exon4ASPNIDRAFT_53525-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53525-T1.exon3ASPNIDRAFT_53525-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53525-T1.exon2ASPNIDRAFT_53525-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53525-T1.exon1ASPNIDRAFT_53525-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53525-T1.utr5p1ASPNIDRAFT_53525-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036351
DBxrefInterPro:IPR001515
DBxrefPFAM:PF01655
Product60S ribosomal protein L32
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1619473..1620787 -
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