You are here

Home

ASPNIDRAFT_53684-T1, ASPNIDRAFT_53684-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53684-T1
Unique NameASPNIDRAFT_53684-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:391017..393464-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53684-T1 ID=ASPNIDRAFT_53684-T1|Name=ASPNIDRAFT_53684-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2448bp|location=Sequence derived from alignment at ACJE01000013.1:391017..393464- (Aspergillus niger ATCC 1015)
ATGAGTCCTCAAGGAATTACCCGCAAGAGACCTGCGCCTGGCACATCCCC
GATCGTCCATCCTCAGCTGGGCCCACTCTCCAGCTACCCTCAGAACCCCG
GAAACCAACTCTCCAACGATCAGTTTCTGCAATGGGGTCAGAGCTCCTCG
AGCGTCTCCAGCCCCTCCTTTCCTGATGCCAACCCCTACAGCGCCACGGC
CTACACGTCCAGCCCGGACGTGCCTGCGGCCAACGTTACTGCTACTGCAC
CGGGGCAGCTCGCGCGTCGTCAGACCCCAACTCAACTGGTAAACCGCGGT
CGAGGATATGAACAGACACCACCGTTTTCGGATCATAGTACTGGAACTGG
AGAAAACGGGGGATGGGGGGAGAGTCTGGAAGACCTTTATAAGCGCGCGA
TGGTTGCGAAGAGGGAGGCGCAGGCCAAGCGGAAGCAGATCCCTCCGTTT
GTGCAAAAATTGAGCAGGTAGGTCTACCCACTGACGTGTAGCGAATGAAG
GAATACTAACTGAATTGAATCTAGTTTTCTGGACGAGTCGAAGAACACTG
AACTTATCCGATGGTCTGATGATGGAAACTCTTTCATCGTTATGGACGAA
GATGAGTTTGCGAAGACCCTCATTCCGGAGCTCTTTAAACACAACAACTA
CGCCTCTTTCGTTCGCCAGCTGAACATGTATGGCTTTCACAAGAAAGTCG
GACTGTCGGACAACTCGATGCGTGCCAGCGAGCGGAAGAACAAGAGCCCG
AGCGAATACGCCAACCCATACTTCAAGCGCGGGCATCCTGACCTGCTATG
GTTGATCCAGAAGCCCAAGAACACGGCGGGTCAGGGTAGCAAGTCTGGAA
AAGCGAATGTGCGTGTGAAGACCGAGGAAGCGGAGGATCAGGACCACGAT
GACTATGGGGATGATGGCGTTGGAGCTCGAGATGATCGTGCGCGCAACCG
CCAATTGTCTCTCATCACGAACAATGTCATGCCTAAAGACCAACTGGCAG
GCGTGTATCGAGAATTGCAAGCTATTCGGCAGCAACAACAGATCATTTCC
AACACCATTAGCAAACTACGGCGCGAGCACGAGCAACTGTACGCGCAGGC
GGCCAACTTCCAGGAGCAGCATACACGGCACGAGAACTCCATCAATGCTA
TCCTCACGTTCCTAGCAACTGTCTACAATCGCAGTCTGCAGGGGCAGGAA
GGACCACAGAATCTGGCGAACTCGTTCGCGGGAGCTATCTCTCAAGACCA
AGGCAACGTTGTCGACATGGGGGACGATTATACGCTGAGCACCTTGGGTG
CGTCCAATCTGAACAGCCCTGGTGGCCAACGGTCAATGAAGAAGCAACCG
CTCTTGCTGAAAGCCCCCCCGGGGGCTGACCGGCAGAGCCGTGCGACAAC
ATTGTCCCCTGCTGCCGCCGCCTATGACCGCTCACAACCGCGTGGCCATG
GCCGGCAACCGAGTGCGTCGCAGCCTGGCCATGTCGAGGAGGTGTTTGAC
ACGAGCCCGCGGCCGAAGGAGGCGCCGGTGCCAGCAAATCAACAGTACCC
ACAACGTGACATTATGTCAGTAATTCAAAACTCCAATGCTCGCAACGGCA
TGCCAACGACGTTCGCCGACTTCCCTAATGTGCTGTCATCGCTTGAAACA
TCCGGTGGAAACTCGCCACTCACCCCCAATCAGCGTGCAGATATGCTCCG
TCTGATGGCCAACGAGAGCAATTCCAGCGGCACCAGCCCCCCGGTGTCCC
AGAACAACGCGCTGATGACACCGACGCCACCACCGATGCCACACAACTAC
TCGGGCCGGCTGGCCAACACCCGCGCGGAGATCGATAACCTGGTGAAGAT
GCAAGCAGAGCAAGACCGTTCCGTGCAGAACCTGACCAACCTGCTTCAAC
CCTTGAGCCCTACGGGCACCATCCCTGGCATTGGCACTGACGGCAGCGTC
CCCCCTCCCCCACTAAACCTTGATGAGATATTCACCAACGACTACTTCAC
GGACATTGGAGACCTCGAACATAATAAACATAGCTTAGATTTCGGCGACT
CGTCTCACTCGGTGCCGGTCACGACATCGGCTGACCCAACGGCGACGACG
GGTCCTGAGGACGGCGTGATCAAGGATGCCAACGAGCTGTTTGATTTCGA
TCAAATCCCAGCAGAGGGTGATCTCTTCAGCGGGGCCAACCCGCAGTCGA
CGGCCGGATACTACAACGGTTTCGACGGCAGTGGTTATGGAACCAACCCA
ATGAGCTCAGGAGTCGGCGCGGATGCGCAAATTCCCATCAGCCACGAGTC
CAATCGCACCGAGGCACTTCCAGACAGCGAGAGCACCAGCCCGGCCAACA
CGGTGGATGATGGCTTGCAATATGGCGGGTCCGAAACTAACGATTCTCAG
GGAGGTAAGGGCAATGGCGGCGGCGCGAAGCGGCGCAAGAAGGCTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:391017..393464-

>ASPNIDRAFT_53684-T1 ID=ASPNIDRAFT_53684-T1|Name=ASPNIDRAFT_53684-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4782bp|location=Sequence derived from alignment at ACJE01000013.1:391017..393464- (Aspergillus niger ATCC 1015)
TTTTCTGGACGAGTCGAAGAACACTGAACTTATCCGATGGTCTGATGATG
GAAACTCTTTCATCGTTATGGACGAAGATGAGTTTGCGAAGACCCTCATT
CCGGAGCTCTTTAAACACAACAACTACGCCTCTTTCGTTCGCCAGCTGAA
CATGTATGGCTTTCACAAGAAAGTCGGACTGTCGGACAACTCGATGCGTG
CCAGCGAGCGGAAGAACAAGAGCCCGAGCGAATACGCCAACCCATACTTC
AAGCGCGGGCATCCTGACCTGCTATGGTTGATCCAGAAGCCCAAGAACAC
GGCGGGTCAGGGTAGCAAGTCTGGAAAAGCGAATGTGCGTGTGAAGACCG
AGGAAGCGGAGGATCAGGACCACGATGACTATGGGGATGATGGCGTTGGA
GCTCGAGATGATCGTGCGCGCAACCGCCAATTGTCTCTCATCACGAACAA
TGTCATGCCTAAAGACCAACTGGCAGGCGTGTATCGAGAATTGCAAGCTA
TTCGGCAGCAACAACAGATCATTTCCAACACCATTAGCAAACTACGGCGC
GAGCACGAGCAACTGTACGCGCAGGCGGCCAACTTCCAGGAGCAGCATAC
ACGGCACGAGAACTCCATCAATGCTATCCTCACGTTCCTAGCAACTGTCT
ACAATCGCAGTCTGCAGGGGCAGGAAGGACCACAGAATCTGGCGAACTCG
TTCGCGGGAGCTATCTCTCAAGACCAAGGCAACGTTGTCGACATGGGGGA
CGATTATACGCTGAGCACCTTGGGTGCGTCCAATCTGAACAGCCCTGGTG
GCCAACGGTCAATGAAGAAGCAACCGCTCTTGCTGAAAGCCCCCCCGGGG
GCTGACCGGCAGAGCCGTGCGACAACATTGTCCCCTGCTGCCGCCGCCTA
TGACCGCTCACAACCGCGTGGCCATGGCCGGCAACCGAGTGCGTCGCAGC
CTGGCCATGTCGAGGAGGTGTTTGACACGAGCCCGCGGCCGAAGGAGGCG
CCGGTGCCAGCAAATCAACAGTACCCACAACGTGACATTATGTCAGTAAT
TCAAAACTCCAATGCTCGCAACGGCATGCCAACGACGTTCGCCGACTTCC
CTAATGTGCTGTCATCGCTTGAAACATCCGGTGGAAACTCGCCACTCACC
CCCAATCAGCGTGCAGATATGCTCCGTCTGATGGCCAACGAGAGCAATTC
CAGCGGCACCAGCCCCCCGGTGTCCCAGAACAACGCGCTGATGACACCGA
CGCCACCACCGATGCCACACAACTACTCGGGCCGGCTGGCCAACACCCGC
GCGGAGATCGATAACCTGGTGAAGATGCAAGCAGAGCAAGACCGTTCCGT
GCAGAACCTGACCAACCTGCTTCAACCCTTGAGCCCTACGGGCACCATCC
CTGGCATTGGCACTGACGGCAGCGTCCCCCCTCCCCCACTAAACCTTGAT
GAGATATTCACCAACGACTACTTCACGGACATTGGAGACCTCGAACATAA
TAAACATAGCTTAGATTTCGGCGACTCGTCTCACTCGGTGCCGGTCACGA
CATCGGCTGACCCAACGGCGACGACGGGTCCTGAGGACGGCGTGATCAAG
GATGCCAACGAGCTGTTTGATTTCGATCAAATCCCAGCAGAGGGTGATCT
CTTCAGCGGGGCCAACCCGCAGTCGACGGCCGGATACTACAACGGTTTCG
ACGGCAGTGGTTATGGAACCAACCCAATGAGCTCAGGAGTCGGCGCGGAT
GCGCAAATTCCCATCAGCCACGAGTCCAATCGCACCGAGGCACTTCCAGA
CAGCGAGAGCACCAGCCCGGCCAACACGGTGGATGATGGCTTGCAATATG
GCGGGTCCGAAACTAACGATTCTCAGGGAGGTAAGGGCAATGGCGGCGGC
GCGAAGCGGCGCAAGAAGGCTTGAATGAGTCCTCAAGGAATTACCCGCAA
GAGACCTGCGCCTGGCACATCCCCGATCGTCCATCCTCAGCTGGGCCCAC
TCTCCAGCTACCCTCAGAACCCCGGAAACCAACTCTCCAACGATCAGTTT
CTGCAATGGGGTCAGAGCTCCTCGAGCGTCTCCAGCCCCTCCTTTCCTGA
TGCCAACCCCTACAGCGCCACGGCCTACACGTCCAGCCCGGACGTGCCTG
CGGCCAACGTTACTGCTACTGCACCGGGGCAGCTCGCGCGTCGTCAGACC
CCAACTCAACTGGTAAACCGCGGTCGAGGATATGAACAGACACCACCGTT
TTCGGATCATAGTACTGGAACTGGAGAAAACGGGGGATGGGGGGAGAGTC
TGGAAGACCTTTATAAGCGCGCGATGGTTGCGAAGAGGGAGGCGCAGGCC
AAGCGGAAGCAGATCCCTCCGTTTGTGCAAAAATTGAGCAGTTTTCTGGA
CGAGTCGAAGAACACTGAACTTATCCGATGGTCTGATGATGGAAACTCTT
TCATCGTTATGGACGAAGATGAGTTTGCGAAGACCCTCATTCCGGAGCTC
TTTAAACACAACAACTACGCCTCTTTCGTTCGCCAGCTGAACATGTATGG
CTTTCACAAGAAAGTCGGACTGTCGGACAACTCGATGCGTGCCAGCGAGC
GGAAGAACAAGAGCCCGAGCGAATACGCCAACCCATACTTCAAGCGCGGG
CATCCTGACCTGCTATGGTTGATCCAGAAGCCCAAGAACACGGCGGGTCA
GGGTAGCAAGTCTGGAAAAGCGAATGTGCGTGTGAAGACCGAGGAAGCGG
AGGATCAGGACCACGATGACTATGGGGATGATGGCGTTGGAGCTCGAGAT
GATCGTGCGCGCAACCGCCAATTGTCTCTCATCACGAACAATGTCATGCC
TAAAGACCAACTGGCAGGCGTGTATCGAGAATTGCAAGCTATTCGGCAGC
AACAACAGATCATTTCCAACACCATTAGCAAACTACGGCGCGAGCACGAG
CAACTGTACGCGCAGGCGGCCAACTTCCAGGAGCAGCATACACGGCACGA
GAACTCCATCAATGCTATCCTCACGTTCCTAGCAACTGTCTACAATCGCA
GTCTGCAGGGGCAGGAAGGACCACAGAATCTGGCGAACTCGTTCGCGGGA
GCTATCTCTCAAGACCAAGGCAACGTTGTCGACATGGGGGACGATTATAC
GCTGAGCACCTTGGGTGCGTCCAATCTGAACAGCCCTGGTGGCCAACGGT
CAATGAAGAAGCAACCGCTCTTGCTGAAAGCCCCCCCGGGGGCTGACCGG
CAGAGCCGTGCGACAACATTGTCCCCTGCTGCCGCCGCCTATGACCGCTC
ACAACCGCGTGGCCATGGCCGGCAACCGAGTGCGTCGCAGCCTGGCCATG
TCGAGGAGGTGTTTGACACGAGCCCGCGGCCGAAGGAGGCGCCGGTGCCA
GCAAATCAACAGTACCCACAACGTGACATTATGTCAGTAATTCAAAACTC
CAATGCTCGCAACGGCATGCCAACGACGTTCGCCGACTTCCCTAATGTGC
TGTCATCGCTTGAAACATCCGGTGGAAACTCGCCACTCACCCCCAATCAG
CGTGCAGATATGCTCCGTCTGATGGCCAACGAGAGCAATTCCAGCGGCAC
CAGCCCCCCGGTGTCCCAGAACAACGCGCTGATGACACCGACGCCACCAC
CGATGCCACACAACTACTCGGGCCGGCTGGCCAACACCCGCGCGGAGATC
GATAACCTGGTGAAGATGCAAGCAGAGCAAGACCGTTCCGTGCAGAACCT
GACCAACCTGCTTCAACCCTTGAGCCCTACGGGCACCATCCCTGGCATTG
GCACTGACGGCAGCGTCCCCCCTCCCCCACTAAACCTTGATGAGATATTC
ACCAACGACTACTTCACGGACATTGGAGACCTCGAACATAATAAACATAG
CTTAGATTTCGGCGACTCGTCTCACTCGGTGCCGGTCACGACATCGGCTG
ACCCAACGGCGACGACGGGTCCTGAGGACGGCGTGATCAAGGATGCCAAC
GAGCTGTTTGATTTCGATCAAATCCCAGCAGAGGGTGATCTCTTCAGCGG
GGCCAACCCGCAGTCGACGGCCGGATACTACAACGGTTTCGACGGCAGTG
GTTATGGAACCAACCCAATGAGCTCAGGAGTCGGCGCGGATGCGCAAATT
CCCATCAGCCACGAGTCCAATCGCACCGAGGCACTTCCAGACAGCGAGAG
CACCAGCCCGGCCAACACGGTGGATGATGGCTTGCAATATGGCGGGTCCG
AAACTAACGATTCTCAGGGAGGTAAGGGCAATGGCGGCGGCGCGAAGCGG
CGCAAGAAGGCTTGAATGAGTCCTCAAGGAATTACCCGCAAGAGACCTGC
GCCTGGCACATCCCCGATCGTCCATCCTCAGCTGGGCCCACTCTCCAGCT
ACCCTCAGAACCCCGGAAACCAACTCTCCAACGATCAGTTTCTGCAATGG
GGTCAGAGCTCCTCGAGCGTCTCCAGCCCCTCCTTTCCTGATGCCAACCC
CTACAGCGCCACGGCCTACACGTCCAGCCCGGACGTGCCTGCGGCCAACG
TTACTGCTACTGCACCGGGGCAGCTCGCGCGTCGTCAGACCCCAACTCAA
CTGGTAAACCGCGGTCGAGGATATGAACAGACACCACCGTTTTCGGATCA
TAGTACTGGAACTGGAGAAAACGGGGGATGGGGGGAGAGTCTGGAAGACC
TTTATAAGCGCGCGATGGTTGCGAAGAGGGAGGCGCAGGCCAAGCGGAAG
CAGATCCCTCCGTTTGTGCAAAAATTGAGCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53684ASPNIDRAFT_53684Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53684-T1ASPNIDRAFT_53684-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53684-T1.cdsASPNIDRAFT_53684-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53684-T1.exon2ASPNIDRAFT_53684-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53684-T1.exon1ASPNIDRAFT_53684-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR000232
DBxrefPFAM:PF00447
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:391017..393464 -
Powered by Drupal