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ASPNIDRAFT_54187-T1, ASPNIDRAFT_54187-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54187-T1
Unique NameASPNIDRAFT_54187-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1077537..1078617+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54187-T1 ID=ASPNIDRAFT_54187-T1|Name=ASPNIDRAFT_54187-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1081bp|location=Sequence derived from alignment at ACJE01000020.1:1077537..1078617+ (Aspergillus niger ATCC 1015)
GGCTCATTGTCTGACCGCCGACGCGCTCCTTCATTCACTATTGGACTAGT
TCTGGCCGGCCCTCCCTTGCTCGCCAGCCACCAACCACCAGTCACCACTA
CCACCACTCACCTTCATTCACTATTAACACTACCACCATGGCCGACTCAT
CGGCTTCGCAACCTCCCCCTCCAGCTGCTGCCCCTGCTTCCGCCTCGGCT
CCGGCTCCAGCTCCTCCAGCATCGCAAGATTCCTCCTCCGCGACTGTCGT
CCCCAAACAAGAACCAGATACCGCTGACAACACCCTGGATGCGTCTATCG
AACAAGACGTCGACATAAACACAAACAACACCGCCAACATGCCGAACCAG
AATCCCGCTGGCGATGACGCCGCCGCCGCCGCCGGAAACTCCATCCCCGC
GCCCACCTCCGTGGATGCTCTGGCGGCCGCCGCAGCACCTGCCAAGAAAG
AGACCAGCTTGCGGGAGTTCATGGGCAAGATGGACGAATATGCGCCGATT
GTAAGATTCCTTGCCCTCTCCAGCTGGATTCCATCTTATGTCACTTTTTC
TCTCCACTACCACCCTCAATTACTTCCACCCCATACTTCTATTCCATGTC
TTTCTAACACGGATATCTTTAGATCCCCGACGCCGTCACAGCCCACTATC
TCACTCTTGCCGGTCTTCCACCTCCAGGTAACGGCCCCAACCAAACACCG
CCTCACCTCGCCCGTCTTCTCGCTCTCGCAACCCAGAAATTTATCGCCGA
CATCGCCGCCGACTCGTACCAGTATGCGCGCATTCGCGCCTCCAACAGCT
CCTCCGCCAGTAACCCCATGGGCAGTTTGAACGCCGCCTCAGGCTTGAAC
ATGCCCGCCGGCGCTGCGGGTGTGGGGTCCGCCGGTGCTGCGACCGGAGT
GTCAGGCGGCGATGCAGGAAAGGGCAAAGCGGGCACCCATCTCGGAATCC
AGAGACCCGGATTTGGAGGTGGCGGTTCTGGAGGTTCCGGACAGGGACGG
ACGGTGCTTACGATGGAGGACTTGGGTATGGCGGTGTCGGAGTATGGTGT
CAGTGTTAAGAGGGGGGAGTTTTATCGGTGA
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Coding sequence (CDS) from alignment at ACJE01000020.1:1077537..1078617+

>ASPNIDRAFT_54187-T1 ID=ASPNIDRAFT_54187-T1|Name=ASPNIDRAFT_54187-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1644bp|location=Sequence derived from alignment at ACJE01000020.1:1077537..1078617+ (Aspergillus niger ATCC 1015)
ATGGCCGACTCATCGGCTTCGCAACCTCCCCCTCCAGCTGCTGCCCCTGC
TTCCGCCTCGGCTCCGGCTCCAGCTCCTCCAGCATCGCAAGATTCCTCCT
CCGCGACTGTCGTCCCCAAACAAGAACCAGATACCGCTGACAACACCCTG
GATGCGTCTATCGAACAAGACGTCGACATAAACACAAACAACACCGCCAA
CATGCCGAACCAGAATCCCGCTGGCGATGACGCCGCCGCCGCCGCCGGAA
ACTCCATCCCCGCGCCCACCTCCGTGGATGCTCTGGCGGCCGCCGCAGCA
CCTGCCAAGAAAGAGACCAGCTTGCGGGAGTTCATGGGCAAGATGGACGA
ATATGCGCCGATTATCCCCGACGCCGTCACAGCCCACTATCTCACTCTTG
CCGGTCTTCCACCTCCAGGTAACGGCCCCAACCAAACACCGCCTCACCTC
GCCCGTCTTCTCGCTCTCGCAACCCAGAAATTTATCGCCGACATCGCCGC
CGACTCGTACCAGTATGCGCGCATTCGCGCCTCCAACAGCTCCTCCGCCA
GTAACCCCATGGGCAGTTTGAACGCCGCCTCAGGCTTGAACATGCCCGCC
GGCGCTGCGGGTGTGGGGTCCGCCGGTGCTGCGACCGGAGTGTCAGGCGG
CGATGCAGGAAAGGGCAAAGCGGGCACCCATCTCGGAATCCAGAGACCCG
GATTTGGAGGTGGCGGTTCTGGAGGTTCCGGACAGGGACGGACGGTGCTT
ACGATGGAGGACTTGGGTATGGCGGTGTCGGAGTATGGTGTCAGTGTTAA
GAGGGGGGAGTTTTATCGGTGAATGGCCGACTCATCGGCTTCGCAACCTC
CCCCTCCAGCTGCTGCCCCTGCTTCCGCCTCGGCTCCGGCTCCAGCTCCT
CCAGCATCGCAAGATTCCTCCTCCGCGACTGTCGTCCCCAAACAAGAACC
AGATACCGCTGACAACACCCTGGATGCGTCTATCGAACAAGACGTCGACA
TAAACACAAACAACACCGCCAACATGCCGAACCAGAATCCCGCTGGCGAT
GACGCCGCCGCCGCCGCCGGAAACTCCATCCCCGCGCCCACCTCCGTGGA
TGCTCTGGCGGCCGCCGCAGCACCTGCCAAGAAAGAGACCAGCTTGCGGG
AGTTCATGGGCAAGATGGACGAATATGCGCCGATTATCCCCGACGCCGTC
ACAGCCCACTATCTCACTCTTGCCGGTCTTCCACCTCCAGGTAACGGCCC
CAACCAAACACCGCCTCACCTCGCCCGTCTTCTCGCTCTCGCAACCCAGA
AATTTATCGCCGACATCGCCGCCGACTCGTACCAGTATGCGCGCATTCGC
GCCTCCAACAGCTCCTCCGCCAGTAACCCCATGGGCAGTTTGAACGCCGC
CTCAGGCTTGAACATGCCCGCCGGCGCTGCGGGTGTGGGGTCCGCCGGTG
CTGCGACCGGAGTGTCAGGCGGCGATGCAGGAAAGGGCAAAGCGGGCACC
CATCTCGGAATCCAGAGACCCGGATTTGGAGGTGGCGGTTCTGGAGGTTC
CGGACAGGGACGGACGGTGCTTACGATGGAGGACTTGGGTATGGCGGTGT
CGGAGTATGGTGTCAGTGTTAAGAGGGGGGAGTTTTATCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54187ASPNIDRAFT_54187Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54187-T1.utr5p1ASPNIDRAFT_54187-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54187-T1.exon1ASPNIDRAFT_54187-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54187-T1.exon2ASPNIDRAFT_54187-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54187-T1.cdsASPNIDRAFT_54187-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54187-T1ASPNIDRAFT_54187-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003923
DBxrefPFAM:PF03540
ProductTFIID subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1077537..1078617 +
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