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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000001.1:1001295..1002770+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54353-T1 ID=ASPNIDRAFT_54353-T1|Name=ASPNIDRAFT_54353-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1476bp|location=Sequence derived from alignment at ACJE01000001.1:1001295..1002770+ (Aspergillus niger ATCC 1015)
ATTCACCTTTCTCGACGCTCCTACGCCTTCGCGACCCTCTCCCGACCCCT
TTACACCACTTCCTACGACCACCACCTTCCTGCCCTTCTAAACCGAATCC
TTCCGCGGGCGTTGGGCGACCTGCGGCCAATCAGAGATGAGTTTGAAGGG
CTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCA
ATATTGGCGAGCATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGA
TTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCACGATGAGTCCAAGAA
GTACTTCGATGCCATCAACGGTACACACGGATCCCCCGTCTCGCAGCTAC
CCCTCCTTTTGCTGACTGGCGTATTTTTCCAGGCATGTTGAACCACCAGA
TTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTCGT
GCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCG
GGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGG
TGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGCAG
CTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCA
CAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGG
ATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAGAA
AATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTGCT
CAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTC
CTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCTTCTACACACTA
CACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGA
CATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCG
AGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCGGC
TCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTA
CGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTT
ACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCC
GCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGA
AACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCA
GCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAACGGATAACCAG
AATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGG
TGAGCATGACCGGCTGTCATTATCAAAACATACCTCGCTAACTTGTATTC
CAGCAAACTACGTCCAGCTGAACTAG back to topCoding sequence (CDS) from alignment at ACJE01000001.1:1001295..1002770+ >ASPNIDRAFT_54353-T1 ID=ASPNIDRAFT_54353-T1|Name=ASPNIDRAFT_54353-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2556bp|location=Sequence derived from alignment at ACJE01000001.1:1001295..1002770+ (Aspergillus niger ATCC 1015)
ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTT
CAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGG
ACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC
GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCA
GATTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTC
GTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATC
CGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCT
GGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGC
AGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGAC
CACAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCA
GGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAG
AAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTG
CTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCG
TCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCTTCTACACAC
TACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTG
GACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGC
CGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCG
GCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGT
TACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCC
TTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGC
CCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTC
GAAACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCT
CAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAACGGATAACC
AGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCT
GGTGAGCATGACCGGCTGTCATTATCAAAACATACCTCGCTAACTTGTAT
TCCAGCAAACTACGTCCAGCTGAACTAGATGAGTTTGAAGGGCTTTCAGA
AGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGC
GAGCATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGA
ACTCGAAAAGGAGACCAAGAAGCTGCACGATGAGTCCAAGAAGTACTTCG
ATGCCATCAACGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATG
ACGGAACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTA
TACAATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGGAATACGAGG
CGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATC
GACACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGT
GATCCGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGGACTACGACC
GCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTG
AAGGATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGCGAC
TCAGGACTACAACTACTACAACGACCTGCTCAAGGACGAGTTGCCCAAGC
TGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTAC
TACATGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGGCAT
CAATATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAGCGTTCGAGA
ACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCAC
TTTAAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGA
CAAACTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTCAGCGAGATC
CCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGC
AGCTTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACC
GAAGCCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGGCACTATATG
ACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTC
ATCGAGATCACACAGCGAACGGATAACCAGAATGAGTGGTGGAGCGGCCG
TGTTGACGGACGAGAGGGACAATTTCCTGGTGAGCATGACCGGCTGTCAT
TATCAAAACATACCTCGCTAACTTGTATTCCAGCAAACTACGTCCAGCTG
AACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262PPU |
| DBxref | InterPro:IPR036028 |
| DBxref | InterPro:IPR027267 |
| DBxref | InterPro:IPR004148 |
| DBxref | InterPro:IPR001452 |
| DBxref | PFAM:PF14604 |
| DBxref | PFAM:PF07653 |
| DBxref | PFAM:PF00018 |
| DBxref | PFAM:PF03114 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000001.1 | supercontig | ACJE01000001.1:1001295..1002770 + |
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