|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:680691..681593+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54575-T1 ID=ASPNIDRAFT_54575-T1|Name=ASPNIDRAFT_54575-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=903bp|location=Sequence derived from alignment at ACJE01000016.1:680691..681593+ (Aspergillus niger ATCC 1015)
GAGATCCTCCATTCTCTCGCAGATTTTCGGCGGCTATAGAATTACCATCT
ATCCGCCAACCGACACCATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCG
ACCGGTGCCCTCCGTCAAATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGC
TCTTGTTTCGCGCCCTTTTTCGCAAATCGCACGCCTTTCCCTTGGCAATG
GCCTTCGCCTTTTGCGCTCTGGAAAGCAGACCAACAATGTCGGAGTTGCT
AGTGTGGGGTCAACATTGAGACAGGTTGAGCAGGTTCGGGGAATGAAGAC
TCGCTCATCGGTGAAGCGGTTGTGTGATGGCTGCAAGGTATGCCATGATC
TAGTTGGATTGGATTTATTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGG
AGTTTGCGTTTTATCTGTCGGAACGATGCTAATACAGTGAAAATGCAGCC
TGTGCGGAGAAAAAACCGCGTCTACATTATCTGGTAAGATCACATCGATG
CAAGCTGCAAGTGCACTATAGCATGATCGCTGACATCTTCGTTCTGCAAA
ATAGCTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATTGGT
GGAAACGATTGTGAGAGCATGAGAGAATGAGCGTACCTTCGAACGAGATT
TGCTTGCATTGAACATCAACTGAAGCCGATGGAAGAGCTAGCATTACTTG
CATGACCTCTGCCTGATACTGCGACGGCGGTAGTCAAATCGTGGATAGAT
GTATTGTGGGTATACGGCTACTACTACTGGGTCTCGACATTGGGAAAGCC
GCGCATTTGCTATGGGATACGACCAACTGGTTGGTTAGGCGCTTTGTTGC
ATTGTTTGTACATTAATTGTGTCTATATATTGAAATTCTCTTTCTTCGAA
TCA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:680691..681593+ >ASPNIDRAFT_54575-T1 ID=ASPNIDRAFT_54575-T1|Name=ASPNIDRAFT_54575-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1035bp|location=Sequence derived from alignment at ACJE01000016.1:680691..681593+ (Aspergillus niger ATCC 1015)
ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA
AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT
TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC
TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT
GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC
GGTTGTGTGATGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATT
ATCTGCTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATGCT
GTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATTC
TCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTCG
CAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTGG
AAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGAC
AGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTTG
TGTGATGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATTATCTG
CTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATGCTGTCTT
TCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATTCTCCCC
TCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTCGCAAAT
CGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTGGAAAGC
AGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGACAGGTT
GAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTTGTGTGA
TGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATTATCTGCTCCA
AGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035977 |
| DBxref | InterPro:IPR000473 |
| DBxref | PFAM:PF00444 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:680691..681593 + |
|
