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ASPNIDRAFT_55090-T1, ASPNIDRAFT_55090-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55090-T1
Unique NameASPNIDRAFT_55090-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000014.1:147737..149096+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55090-T1 ID=ASPNIDRAFT_55090-T1|Name=ASPNIDRAFT_55090-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1360bp|location=Sequence derived from alignment at ACJE01000014.1:147737..149096+ (Aspergillus niger ATCC 1015)
GCTGTGTGGCGCCATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGA
CACCATACATCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAG
GATACAGTACTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGG
CGATCTAGACTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTC
CCCGGTCACTATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGAT
GACGACGAGGAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAA
TGATCTCAAACGGGTAGGTCTCTAAATGCGATGAACTTTGTCGAGGGACC
TCGGTTTGTGTTACACACGGACTGACACTTGCGACCTTTTGCAGGTCAGT
TTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGACTATCT
ACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGACGCAAA
ATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAATCGTATG
GTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAAGCGGGA
TATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCAGGAAAA
CGGTACCGAGTATGTACCATCTGTTACTGCGACAAAGGAGATCTTGCTCA
CATTGTAATAGAACAAACCGCTTTGGTGGGGAGCGTGAGTGAAGAGTTCA
ACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGGAGAAGAAG
GCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATCGATAAGAT
TCCGGGTAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGAGAAGGGTG
CTTTTGTGGTAAGTGTGCCTTTGCCGTGCTCATTAGTCCTACTTTACTTA
CCAAACACTTTTCATTCCAGCAAGCAACAAGGCCAGTCAAGGCCAAGGCC
CAGGAGAACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTAT
CTACCAGTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAG
CGAGACTGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTT
GCGCATTTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCC
CGAAGCGAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGG
ATGAACTCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAA
GCCACGCCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAA
CGTTGTCTAA
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Coding sequence (CDS) from alignment at ACJE01000014.1:147737..149096+

>ASPNIDRAFT_55090-T1 ID=ASPNIDRAFT_55090-T1|Name=ASPNIDRAFT_55090-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4608bp|location=Sequence derived from alignment at ACJE01000014.1:147737..149096+ (Aspergillus niger ATCC 1015)
ATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACATCAA
ACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTACTCG
CTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGACTTC
TCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCACTATG
GGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAGGAGA
TTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAAACGG
GTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAAGA
CTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTTGA
CGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGAAT
CGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATGAA
GCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGTCA
GGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGTGAAGAG
TTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGGAGAA
GAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATCGATA
AGATTCCGGGTAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGAGAAG
GGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGGCCAAGGCCCAGGAGAA
CAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCAGT
GCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGACTG
CGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCATTT
GGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAAGCGA
GGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGAACTC
GCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACGCC
TTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGTCT
AAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACATC
AAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTACT
CGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGACT
TCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCACTA
TGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAGGA
GATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAAAC
GGGTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTAAA
GACTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCACTT
GACGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGAGA
ATCGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGATG
AAGCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTACGT
CAGGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGTGAAG
AGTTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGGAG
AAGAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATCGA
TAAGATTCCGGGTAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGAGA
AGGGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGGCCAAGGCCCAGGAG
AACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTACCA
GTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAGAC
TGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGCAT
TTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAAGC
GAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGAAC
TCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCACG
CCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTTGT
CTAAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATACA
TCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAGTA
CTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTAGA
CTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTCAC
TATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACGAG
GAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTCAA
ACGGGTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCCTA
AAGACTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGCAC
TTGACGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCATGA
GAATCGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTCGA
TGAAGCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCTAC
GTCAGGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGTGA
AGAGTTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTCGG
AGAAGAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTATC
GATAAGATTCCGGGTAAGATGCTCCAGCCGCGGAATGCATTGCCCGGAGA
GAAGGGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGGCCAAGGCCCAGG
AGAACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCTAC
CAGTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCGAG
ACTGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGCGC
ATTTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCGAA
GCGAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGATGA
ACTCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGCCA
CGCCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACGTT
GTCTAAATGGTCCCCCAGGTCAAACAGGAGCCTGATTCCCAGACACCATA
CATCAAACCCGACCCATATATCAAACAGGATCCCGACAGCAAGGATACAG
TACTCGCTGATATCGACGATGAAGATCTATATGAGGATGCGGGCGATCTA
GACTTCTCGGCTGCGAACCAGAGCGTCTGGCTTTCACGGCTTCCCCGGTC
ACTATGGGAACATTGGGCGCATTTGTCAAACAGCGCCGGCGATGACGACG
AGGAGATTCAGATTGGGACAATGAGGATTGAGGGTACACAGAATGATCTC
AAACGGGTCAGTTTGCGCATAAACGCACGAGAAGACAATCGCGATATTCC
TAAAGACTATCTACTGCAACGGCAAACGATAACCTCAGAGAATGTTTCGC
ACTTGACGCAAAATACGTACCTTTTCACGGAGAGGGACCTCCCGGGTCAT
GAGAATCGTATGGTGGTTTTTGGCGAGGCGCGTTCGGCGCTCTATGAGTC
GATGAAGCGGGATATGAGGAAGAAGGAGCGCAAGAAGAAATGGGAGCCCT
ACGTCAGGAAAACGGTACCGAAACAAACCGCTTTGGTGGGGAGCGTGAGT
GAAGAGTTCAACTGCCTTCCGGTTGAGAATGAGGAATTCCGGCGGTTGTC
GGAGAAGAAGGCTCTGGAGGCACTCAAACCGAAGCGTGAGACTGTATTTA
TCGATAAGATTCCGGGTAAGATGCTCCAGCCGCGGAATGCATTGCCCGGA
GAGAAGGGTGCTTTTGTGCAAGCAACAAGGCCAGTCAAGGCCAAGGCCCA
GGAGAACAAAACCACTCGTATGCCTCAAAACGAGCTGTTGGATCTTATCT
ACCAGTGCTTCAGGGAATACAAGTACTGGCCATTTAAGAACCTCAAAGCG
AGACTGCGACAGCCCGAGGCTTATCTCAAACAAACTCTGGAAATGGTTGC
GCATTTGGTTAAAGCTGGTGACTTTGCTATGACCTGGGAGCTGAAGCCCG
AAGCGAGGGAAAGCAACTACGCCAATGCGATGTACAACGATGCTAAGGAT
GAACTCGCTCCGGGAGACTACAACTTCGAGGACGGCTCTGAAGAGGAAGC
CACGCCTTCCGGTATGATGACAGATAATGACGAAGGACAGTTCGAGAACG
TTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55090ASPNIDRAFT_55090Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55090-T1ASPNIDRAFT_55090-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55090-T1.utr5p1ASPNIDRAFT_55090-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55090-T1.exon1ASPNIDRAFT_55090-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55090-T1.exon2ASPNIDRAFT_55090-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55090-T1.exon3ASPNIDRAFT_55090-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55090-T1.exon4ASPNIDRAFT_55090-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55090-T1.cdsASPNIDRAFT_55090-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteBUSCO:EOG09262NIR
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR011039
DBxrefInterPro:IPR040450
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR040504
DBxrefPFAM:PF17683
DBxrefPFAM:PF02270
Product beta subunit
Producttranscription initiation factor IIF
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000014.1supercontigACJE01000014.1:147737..149096 +
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