You are here

Home

ASPNIDRAFT_55194-T1, ASPNIDRAFT_55194-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55194-T1
Unique NameASPNIDRAFT_55194-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000007.1:38916..40008-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55194-T1 ID=ASPNIDRAFT_55194-T1|Name=ASPNIDRAFT_55194-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1093bp|location=Sequence derived from alignment at ACJE01000007.1:38916..40008- (Aspergillus niger ATCC 1015)
CCCCGCCTTCAAGCGAGGCTCAGGGTTGATAACTCCCGCGCCGCCCGGGC
ATCGCGACCGCGACCGCCCATGATGGCTCCAGATACTTAGTCAACCTCTG
TATATACTTGGGATTTCCTCAAGACTGATATCTCCATGCCTGGCAATTAC
CCATGTAAGTGCTGCTCTTGTCAACCGTCGTCCTGCCCTGCAATCTCCGC
AACACGCAACACCCGACAAGGAATTGACCGGCTTTTAGCCCCGAGACCGA
CGGCACCACGCGAGCGTGGCAAATGGAGAAAAAATGAGAAAAATCACAAA
ATGGCCATGAGCCATGGCCACCACCAAAGTGGAAATATAAAAAGCCATGT
ATGTTCTGCGGCTTCATCTCAAGCATACTTGGTGCTAAAGTGCGAAGTAG
GCCATTCGGATTGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTCCCCT
CTGGTCCACCCAAACGCACGGGCAACAGAAAGCGTCTCTAGTTTCGCCTC
AGGATTACTATCCGTCAGGAAAGCGTCCACTTTCGCCGGAGTATTGGGGT
ATAAAGGACTTTCAACGCTCTCAAATGCCTCTGGATCAGCCAGCCAAAAA
GGAGGTGTTGCATGAGACCCGCGAGGGCTTCCAGCACACCGAAGAGCGTG
AGAGACTAACGGGAGTTCTGCAGACCGTGCTTGTCAGTAATCCACCAAAC
CGCGATAACCAGCAGGATGTTCTAAATGCTGATTTCATCTACGATATTCT
CATATCCACTTTCGACAAGCCATTGAGACGACGCATGCTAGTGGACTTTG
AAACAGAGGCTAATTTCATGGATCACGATGTCTTCCAGAGAATGAATGTC
CGCATGGACCCATATGATGGCCCGCCAACCCAACTTACGACTCGGGGGGA
ATTGAGGCCCGTAGGTAAAATGCAGGCAACATGGACTATTTGTGGCCACG
AAAAGCCATATTGTGCCGAATTTTATGTTGTTCGAGGTACCAGTTTTGAT
ATCATCCTTGGCACCACTTCATGCCGGGATATCGGTCTTTACCGTATGGA
TCCTATGGTTGCCAGACGACTCGGTAACCCGGAACAGACATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000007.1:38916..40008-

>ASPNIDRAFT_55194-T1 ID=ASPNIDRAFT_55194-T1|Name=ASPNIDRAFT_55194-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2466bp|location=Sequence derived from alignment at ACJE01000007.1:38916..40008- (Aspergillus niger ATCC 1015)
GCCATTCGGATTGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTCCCCT
CTGGTCCACCCAAACGCACGGGCAACAGAAAGCGTCTCTAGTTTCGCCTC
AGGATTACTATCCGTCAGGAAAGCGTCCACTTTCGCCGGAGTATTGGGGT
ATAAAGGACTTTCAACGCTCTCAAATGCCTCTGGATCAGCCAGCCAAAAA
GGAGGTGTTGCATGAGACCCGCGAGGGCTTCCAGCACACCGAAGAGCGTG
AGAGACTAACGGGAGTTCTGCAGACCGTGCTTGTCAGTAATCCACCAAAC
CGCGATAACCAGCAGGATGTTCTAAATGCTGATTTCATCTACGATATTCT
CATATCCACTTTCGACAAGCCATTGAGACGACGCATGCTAGTGGACTTTG
AAACAGAGGCTAATTTCATGGATCACGATGTCTTCCAGAGAATGAATGTC
CGCATGGACCCATATGATGGCCCGCCAACCCAACTTACGACTCGGGGGGA
ATTGAGGCCCGTAGGTAAAATGCAGGCAACATGGACTATTTGTGGCCACG
AAAAGCCATATTGTGCCGAATTTTATGTTGTTCGAGGTACCAGTTTTGAT
ATCATCCTTGGCACCACTTCATGCCGGGATATCGGTCTTTACCGTATGGA
TCCTATGGTTGCCAGACGACTCGGTAACCCGGAACAGACATAGCCCCGAG
ACCGACGGCACCACGCGAGCGTGGCAAATGGAGAAAAAATGAGAAAAATC
ACAAAATGGCCATGAGCCATGGCCACCACCAAAGTGGAAATATAAAAAGC
CATATGCCTGGCAATTACCCATGCCATTCGGATTGCGCTAAAGGGGACAA
AACACTTGTTTCTCTTTCCCCTCTGGTCCACCCAAACGCACGGGCAACAG
AAAGCGTCTCTAGTTTCGCCTCAGGATTACTATCCGTCAGGAAAGCGTCC
ACTTTCGCCGGAGTATTGGGGTATAAAGGACTTTCAACGCTCTCAAATGC
CTCTGGATCAGCCAGCCAAAAAGGAGGTGTTGCATGAGACCCGCGAGGGC
TTCCAGCACACCGAAGAGCGTGAGAGACTAACGGGAGTTCTGCAGACCGT
GCTTGTCAGTAATCCACCAAACCGCGATAACCAGCAGGATGTTCTAAATG
CTGATTTCATCTACGATATTCTCATATCCACTTTCGACAAGCCATTGAGA
CGACGCATGCTAGTGGACTTTGAAACAGAGGCTAATTTCATGGATCACGA
TGTCTTCCAGAGAATGAATGTCCGCATGGACCCATATGATGGCCCGCCAA
CCCAACTTACGACTCGGGGGGAATTGAGGCCCGTAGGTAAAATGCAGGCA
ACATGGACTATTTGTGGCCACGAAAAGCCATATTGTGCCGAATTTTATGT
TGTTCGAGGTACCAGTTTTGATATCATCCTTGGCACCACTTCATGCCGGG
ATATCGGTCTTTACCGTATGGATCCTATGGTTGCCAGACGACTCGGTAAC
CCGGAACAGACATAGCCCCGAGACCGACGGCACCACGCGAGCGTGGCAAA
TGGAGAAAAAATGAGAAAAATCACAAAATGGCCATGAGCCATGGCCACCA
CCAAAGTGGAAATATAAAAAGCCATATGCCTGGCAATTACCCATGCCATT
CGGATTGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTCCCCTCTGGTC
CACCCAAACGCACGGGCAACAGAAAGCGTCTCTAGTTTCGCCTCAGGATT
ACTATCCGTCAGGAAAGCGTCCACTTTCGCCGGAGTATTGGGGTATAAAG
GACTTTCAACGCTCTCAAATGCCTCTGGATCAGCCAGCCAAAAAGGAGGT
GTTGCATGAGACCCGCGAGGGCTTCCAGCACACCGAAGAGCGTGAGAGAC
TAACGGGAGTTCTGCAGACCGTGCTTGTCAGTAATCCACCAAACCGCGAT
AACCAGCAGGATGTTCTAAATGCTGATTTCATCTACGATATTCTCATATC
CACTTTCGACAAGCCATTGAGACGACGCATGCTAGTGGACTTTGAAACAG
AGGCTAATTTCATGGATCACGATGTCTTCCAGAGAATGAATGTCCGCATG
GACCCATATGATGGCCCGCCAACCCAACTTACGACTCGGGGGGAATTGAG
GCCCGTAGGTAAAATGCAGGCAACATGGACTATTTGTGGCCACGAAAAGC
CATATTGTGCCGAATTTTATGTTGTTCGAGGTACCAGTTTTGATATCATC
CTTGGCACCACTTCATGCCGGGATATCGGTCTTTACCGTATGGATCCTAT
GGTTGCCAGACGACTCGGTAACCCGGAACAGACATAGCCCCGAGACCGAC
GGCACCACGCGAGCGTGGCAAATGGAGAAAAAATGAGAAAAATCACAAAA
TGGCCATGAGCCATGGCCACCACCAAAGTGGAAATATAAAAAGCCATATG
CCTGGCAATTACCCAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55194ASPNIDRAFT_55194Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55194-T1ASPNIDRAFT_55194-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55194-T1.cdsASPNIDRAFT_55194-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55194-T1.exon3ASPNIDRAFT_55194-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55194-T1.exon2ASPNIDRAFT_55194-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55194-T1.exon1ASPNIDRAFT_55194-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55194-T1.utr5p1ASPNIDRAFT_55194-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021109
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000007.1supercontigACJE01000007.1:38916..40008 -
Powered by Drupal