You are here

Home

ASPNIDRAFT_55296-T1, ASPNIDRAFT_55296-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55296-T1
Unique NameASPNIDRAFT_55296-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2741549..2743129-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55296-T1 ID=ASPNIDRAFT_55296-T1|Name=ASPNIDRAFT_55296-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1581bp|location=Sequence derived from alignment at ACJE01000004.1:2741549..2743129- (Aspergillus niger ATCC 1015)
ATGCGTCGACTGTCGCCCTTGTTACGGCAGCCTTTGCTTTCTCGGAAACC
TCCAATCAGGGGTCGATTGGTCCCTTGGCCATCAGTGAGGGCGCAATGGC
TCTCATCGACGTCGTCCCGGCTCTGCTCGTGCTCTGACCCGCAGCCCGGA
CAGCCTCAGGCTCAATCTTCGACCCCAGCCGATTATCGCGCCCTGGGAAC
CTCCCAGGACCTTTTCACAACCTCAGTCTACAGCCCCGGATCGCCTCTGT
TCCTCCCCAATGGCACCCATATCATCAACAAACTCATCACCTTTCTCCGC
ACGCAGTACCTTCAATATGGTTTTCGCGAAGTCCTGACCCCGACGATCTA
CAAACGCTCCCTCTGGGAAGTCTCCGGCCATTGGCAGAATTACAAAGATG
ATATGTACGAGGTGCGCGGTAGGGGGGCTACTGGAGATACGGACGGAGAA
GCGGGAGAGGATGAGTCCTACGGCCTGAAGCCGATGAACTGCCCCGGCCA
CTGCCTGCTATTCAAATCGCAGACGCATTCTTACCGGGAACTGCCCATCC
GCTACGCCGATTTCAGTCCGCTTCATCGGAATGAGGTTTCGGGTTCGCTA
AGCGGACTTACCCGTGTCCGCCGTTTCCATCAAGACGATGGGCATATTTT
CTGTCGACCGCAGCAGATCAAGGGGGAAATCGCTTCGGCACTTGGATTCG
TGGACTTGGTTATGACAACATTCGGACTGGGACCGTATCGCTTAGTCCTT
TCCACAAGGCCAGAGAAGGACTTCATCGGTAGTTTGGAGTTGTGGAATAG
TGCCGAAGCCCAATTGCGCGAGGCACTCGACAATACAGGCAGGGAATGGG
CCATGAACGAAGGTGACGGAGCATTCTACGGCCCCAAAATCGACATCCAG
CTTCAAGACAAAGCAGGAAAATACCACCAACTCTCCACCATCCAGCTCGA
TATGAATCTCCCTCAGCGATTTGGGCTCGAGTACCAGGTCGCTGAAGGTG
AGGATGATTACAACCCGGAGACCCCAGGCAAGGCGACCCCGGTGATGATC
CATCGGGCAAACTTCGGCTCTCTGGAGCGGTTCTTAGCGCTGCTCATTGA
GGAATACGCTGGTCGCTGGCCGTTCTGGCTTTCTCCGCGCCAGGGTATCG
TCCTAACCGTGAACCAAGATGAGGCTGTCGTACAGCAGGCTCACGAAGCG
GCGGCCAAAATCTCTGGATTCCGCGCCCTTCAGCCCGGCCAAATGGGGAC
TGATGCACCCCAGCCCATCTCCTCGGTTGACTCCACATTCTTGATCGATG
TGGACAGCAGTAGCCAATCGCTGAACAAGAAAATCCAGCGAGCCAAGCAG
ATGAAGTACAACCTCATTTTCATCCTGGGACCCAAGGACGTCGCTGCCTC
TCGCATCACGGTGGACGTGACAGGTCAGCTGCAGAGCAAACCCGAACGTG
GGGTGCAGAAGCTGCAAGACATCCTGACGCAACGATTGGGCGAGAAGGCC
TTGAAGAACCCTCGGGCCATTCCCCTACCCGTAGATGACGTGCACGAACT
TCTGGTGCAGCTGGAGAAGCAATTTGTATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2741549..2743129-

>ASPNIDRAFT_55296-T1 ID=ASPNIDRAFT_55296-T1|Name=ASPNIDRAFT_55296-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1581bp|location=Sequence derived from alignment at ACJE01000004.1:2741549..2743129- (Aspergillus niger ATCC 1015)
ATGCGTCGACTGTCGCCCTTGTTACGGCAGCCTTTGCTTTCTCGGAAACC
TCCAATCAGGGGTCGATTGGTCCCTTGGCCATCAGTGAGGGCGCAATGGC
TCTCATCGACGTCGTCCCGGCTCTGCTCGTGCTCTGACCCGCAGCCCGGA
CAGCCTCAGGCTCAATCTTCGACCCCAGCCGATTATCGCGCCCTGGGAAC
CTCCCAGGACCTTTTCACAACCTCAGTCTACAGCCCCGGATCGCCTCTGT
TCCTCCCCAATGGCACCCATATCATCAACAAACTCATCACCTTTCTCCGC
ACGCAGTACCTTCAATATGGTTTTCGCGAAGTCCTGACCCCGACGATCTA
CAAACGCTCCCTCTGGGAAGTCTCCGGCCATTGGCAGAATTACAAAGATG
ATATGTACGAGGTGCGCGGTAGGGGGGCTACTGGAGATACGGACGGAGAA
GCGGGAGAGGATGAGTCCTACGGCCTGAAGCCGATGAACTGCCCCGGCCA
CTGCCTGCTATTCAAATCGCAGACGCATTCTTACCGGGAACTGCCCATCC
GCTACGCCGATTTCAGTCCGCTTCATCGGAATGAGGTTTCGGGTTCGCTA
AGCGGACTTACCCGTGTCCGCCGTTTCCATCAAGACGATGGGCATATTTT
CTGTCGACCGCAGCAGATCAAGGGGGAAATCGCTTCGGCACTTGGATTCG
TGGACTTGGTTATGACAACATTCGGACTGGGACCGTATCGCTTAGTCCTT
TCCACAAGGCCAGAGAAGGACTTCATCGGTAGTTTGGAGTTGTGGAATAG
TGCCGAAGCCCAATTGCGCGAGGCACTCGACAATACAGGCAGGGAATGGG
CCATGAACGAAGGTGACGGAGCATTCTACGGCCCCAAAATCGACATCCAG
CTTCAAGACAAAGCAGGAAAATACCACCAACTCTCCACCATCCAGCTCGA
TATGAATCTCCCTCAGCGATTTGGGCTCGAGTACCAGGTCGCTGAAGGTG
AGGATGATTACAACCCGGAGACCCCAGGCAAGGCGACCCCGGTGATGATC
CATCGGGCAAACTTCGGCTCTCTGGAGCGGTTCTTAGCGCTGCTCATTGA
GGAATACGCTGGTCGCTGGCCGTTCTGGCTTTCTCCGCGCCAGGGTATCG
TCCTAACCGTGAACCAAGATGAGGCTGTCGTACAGCAGGCTCACGAAGCG
GCGGCCAAAATCTCTGGATTCCGCGCCCTTCAGCCCGGCCAAATGGGGAC
TGATGCACCCCAGCCCATCTCCTCGGTTGACTCCACATTCTTGATCGATG
TGGACAGCAGTAGCCAATCGCTGAACAAGAAAATCCAGCGAGCCAAGCAG
ATGAAGTACAACCTCATTTTCATCCTGGGACCCAAGGACGTCGCTGCCTC
TCGCATCACGGTGGACGTGACAGGTCAGCTGCAGAGCAAACCCGAACGTG
GGGTGCAGAAGCTGCAAGACATCCTGACGCAACGATTGGGCGAGAAGGCC
TTGAAGAACCCTCGGGCCATTCCCCTACCCGTAGATGACGTGCACGAACT
TCTGGTGCAGCTGGAGAAGCAATTTGTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004829threonine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006435threonyl-tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55296ASPNIDRAFT_55296Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55296-T1.cdsASPNIDRAFT_55296-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55296-T1.exon1ASPNIDRAFT_55296-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55296-T1ASPNIDRAFT_55296-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033728
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR004154
DBxrefInterPro:IPR036621
DBxrefInterPro:IPR002314
DBxrefInterPro:IPR002320
DBxrefPFAM:PF00587
DBxrefPFAM:PF03129
Productthreonyl-tRNA synthetase kinase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2741549..2743129 -
Powered by Drupal