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ASPNIDRAFT_55510-T1, ASPNIDRAFT_55510-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55510-T1
Unique NameASPNIDRAFT_55510-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:49071..50701-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55510-T1 ID=ASPNIDRAFT_55510-T1|Name=ASPNIDRAFT_55510-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1631bp|location=Sequence derived from alignment at ACJE01000004.1:49071..50701- (Aspergillus niger ATCC 1015)
ATTCCCCGAACCCCCGAAAAAAAGAGTGACGAGCCTCCCCATCGGCTGTT
CTTTCTTCCTTTGATACCAATTGTCTAACAGACCGGTATTTCCGCGAAGT
AATTCTCCTTTCCTTTACTCTTGCTTTTTCTTCTCCCCCTTCTTCTTCTT
ATATTATATATCTCACAGTCCGGCCATGGCTGCTCCCCGACTTTTCCGCC
CAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGA
ATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGAGGCGCTCG
CCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCGTATGGCACCCTGTCCCCCGTGTGAATTGGCTG
CAGTCCATGGATCGCATATCTGAATTCGCTCTCCTATAGTTACAAGGTAA
CGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCC
ATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGG
ACTGCACCCCATTGTGAGTTCCCCGATTTGTGACCTTTGTATACCCCTTT
GGATGTTTAAGGTTCATCAGATGCAAAGTGCACAGTATACTAAGACTTGC
TGTCGATATTTAGTGCGAGTTCATGACCTTCAACTTCGCCATGCAGGCTA
TCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGTGGT
ATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGCTGG
TGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACGGCAGTATCC
CTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTG
TTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAACGA
GTACGTGGCCCCCGTGGAAGTATCGGAGTATTTGTGGAATGTTTTTGAAC
CTGACAATAATTGCATAGGCTGCTGTACGGTCAGGCTTTCCCTATGAGCG
AGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATT
GAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCTGCGTTGG
ACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGTGTTGACG
CTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATC
ATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTT
CCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATGGAGTACG
GTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTC
CCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGA
CACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAAAGGATGAGCC
GTTGTGTATGAACCGACGGTGAAGAAAATCTGAATTAATAAAATCATGTG
TCTAGTACCCTATCATTGTTACAGCCATTTC
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Coding sequence (CDS) from alignment at ACJE01000004.1:49071..50701-

>ASPNIDRAFT_55510-T1 ID=ASPNIDRAFT_55510-T1|Name=ASPNIDRAFT_55510-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4500bp|location=Sequence derived from alignment at ACJE01000004.1:49071..50701- (Aspergillus niger ATCC 1015)
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDB1ASPNIDRAFT_55510Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55510-T1ASPNIDRAFT_55510-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55510-T1.cdsASPNIDRAFT_55510-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55510-T1.utr3p1ASPNIDRAFT_55510-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55510-T1.exon4ASPNIDRAFT_55510-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55510-T1.exon3ASPNIDRAFT_55510-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55510-T1.exon2ASPNIDRAFT_55510-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55510-T1.exon1ASPNIDRAFT_55510-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55510-T1.utr5p1ASPNIDRAFT_55510-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR033248
DBxrefInterPro:IPR009014
DBxrefInterPro:IPR005475
DBxrefPFAM:PF02779
DBxrefPFAM:PF02780
Product beta subunit
Productpyruvate dehydrogenase E1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:49071..50701 -
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