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ASPNIDRAFT_55611-T1, ASPNIDRAFT_55611-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55611-T1
Unique NameASPNIDRAFT_55611-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2433536..2434800+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55611-T1 ID=ASPNIDRAFT_55611-T1|Name=ASPNIDRAFT_55611-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1265bp|location=Sequence derived from alignment at ACJE01000010.1:2433536..2434800+ (Aspergillus niger ATCC 1015)
CATCCTTTCGGATTCTTCTACGCAGGTATTCTCTCGAGGCCATTTTGTCT
CGGATACCTTGTCGATTTCCAGCCTTTCATCAGCCCTTGAACAGTCCCGA
AGCTTTGCCTAGCAGAAGGCGCAACCCCGCCGAAAATGTCGTTGACAAAT
TGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGT
CAATGTGAAGCAGGTATGCATTGCTACAGGTCATGTGGTTCTTTCAGGGT
TCGAAAACATCCTCTAATACTTGTCTTTTCACCCCTCACAGATCGCCGAA
ATGGGCGCATACGTTAAGCTCCTCGAGTATGACAACATCGACGGCATGAT
TCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTA
TTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAG
AAGGGCAAGTCGGAGTCCTCTGGATGACAATATCAGCGTCAATTTACTGA
CTCTTTTTTCTCTACGTCTTTAGGTTACATTGATCTTTCCAAGCGTCGAG
TTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAG
GCAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCT
TGAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATACGGAC
ACTCCCACGATGCGTTCAAGATCTCCATCACGTAAGGAAACCTCTCGACT
CAAGGCTATCGCGGACCGAGTACTCATAACATCACAGGAACCCCGACGTG
TGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCA
CTACATCAGCAAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATA
TTGAGGTTACCTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCC
CTGCGCACCGCCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAA
GCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGG
CTATTGGTATTCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGG
ATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGT
TACTGAGCACGATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGC
GTGAGAACATGGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAG
GGCGTTCCCGAGTAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2433536..2434800+

>ASPNIDRAFT_55611-T1 ID=ASPNIDRAFT_55611-T1|Name=ASPNIDRAFT_55611-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3708bp|location=Sequence derived from alignment at ACJE01000010.1:2433536..2434800+ (Aspergillus niger ATCC 1015)
ATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGA
CAGCTATGTCATGGTCAATGTGAAGCAGATCGCCGAAATGGGCGCATACG
TTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTGCTCTCCGAA
TTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCGTATCGGCCG
TAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAGAAGGGTTACATTG
ATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAA
AGATACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGA
GGCCACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTT
TGAACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACG
AACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAAGAA
GGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCAAGG
TCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGATGCC
GTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAACCCA
GATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCCAGT
GCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAAAGG
ATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGATGGC
TCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCATGG
AGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATGTCC
GAGAGCGATGAGGGCGTTCCCGAGTAAATGTCGTTGACAAATTGCCGTTT
CTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAATGTGA
AGCAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAAC
ATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTAG
TATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTTC
GTGTGGACAAGGAGAAGGGTTACATTGATCTTTCCAAGCGTCGAGTTTCT
CCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAGGCAGT
CCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCTTGAGA
CCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATACGGACACTCC
CACGATGCGTTCAAGATCTCCATCACGAACCCCGACGTGTGGAACGAGGT
TGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACATCAGCA
AGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGGTTACC
TGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGCACCGC
CGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGTTGCCC
CGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTGGTATT
CAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAGGAGTC
TGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGAGCACG
ATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGAACATG
GAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTTCCCGA
GTAAATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGG
TTGACAGCTATGTCATGGTCAATGTGAAGCAGATCGCCGAAATGGGCGCA
TACGTTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTGCTCTC
CGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCGTATCG
GCCGTAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAGAAGGGTTAC
ATTGATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGA
GGAAAGATACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTG
CCGAGGCCACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGG
CCTTTGAACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCAT
CACGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGA
AGAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACC
AAGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGA
TGCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAA
CCCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGC
CAGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCA
AAGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGA
TGGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTC
ATGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCAT
GTCCGAGAGCGATGAGGGCGTTCCCGAGTAAATGTCGTTGACAAATTGCC
GTTTCTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAAT
GTGAAGCAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGA
CAACATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCC
GTAGTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTG
CTTCGTGTGGACAAGGAGAAGGGTTACATTGATCTTTCCAAGCGTCGAGT
TTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAGG
CAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCTT
GAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATACGGACA
CTCCCACGATGCGTTCAAGATCTCCATCACGAACCCCGACGTGTGGAACG
AGGTTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACATC
AGCAAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGGT
TACCTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGCA
CCGCCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGTT
GCCCCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTGG
TATTCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAGG
AGTCTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGAG
CACGATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGAA
CATGGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTTC
CCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55611ASPNIDRAFT_55611Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55611-T1ASPNIDRAFT_55611-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55611-T1.utr5p1ASPNIDRAFT_55611-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55611-T1.exon1ASPNIDRAFT_55611-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55611-T1.exon2ASPNIDRAFT_55611-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55611-T1.exon3ASPNIDRAFT_55611-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55611-T1.exon4ASPNIDRAFT_55611-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55611-T1.cdsASPNIDRAFT_55611-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.6
NoteBUSCO:EOG09263CAH
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR024055
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR011488
DBxrefInterPro:IPR024054
DBxrefInterPro:IPR022967
DBxrefPFAM:PF00575
DBxrefPFAM:PF07541
Productputative eukaryotic translation initiation factor 2 alpha subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2433536..2434800 +
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