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ASPNIDRAFT_55758-T1, ASPNIDRAFT_55758-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55758-T1
Unique NameASPNIDRAFT_55758-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1543859..1544575+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55758-T1 ID=ASPNIDRAFT_55758-T1|Name=ASPNIDRAFT_55758-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=717bp|location=Sequence derived from alignment at ACJE01000021.1:1543859..1544575+ (Aspergillus niger ATCC 1015)
CGAGCCCGGACTTCTTTCTGCTCTGCTTTCGATCGTATCCCCCTGTCACG
CTATCCAGCTAAGCTACCTTGAACTCCGATCTTCGGTCCCCTTCCAATAT
CCATAGACCGCCATCCTTATCTGCCTGCCTCCTTATCACCACTCCTCACT
CACCTCCTCTTTCTCCTCACCGGACTACTGCTCTCCACGTCACCCGCAAC
GTCCGACACTCTTGGTGTGCTCAACCAGTCCTCTCTTTCGGACTGCATAA
ATTACTACTACTACTTTGCCATTTGAGCGTCTTTCACTGTCACTACCAGT
TCTCCCCGGGGAACAAGCACCTCATTTCCAGTCGGCCTATCGTCATTGCT
GCCCCGGCGGCTACTATCTACTCTTGACACCGCCTCTTCTCCCACTCTCG
CCACCACTTTCATCATGGCGCCCCGCAAGCCTCGCTGCAACTTCAAGGAG
TGCAAGGAAGCCGCTCAACGCATCGTCGGAGACTGCAGCTTCTGCAGTGG
TCACTACTGCTCTAAGCATCGCATGTTGGAGGCTCATGCCTGCACTGGTC
TCGAGGACTGCAAGAAGGAGTCCCACGCCCGCAATGCCGATAAGCTCAAC
AGTGAGCGGACTCACGTCATTAAGGGCGTATGAGATCCCATCCCTGGAGA
CTTCACCTCAATTTTCCTCCTGTGATCTTCTCCTTGATCTTTCTTCTTCT
ACATTTCGCTGCGTCGC
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Coding sequence (CDS) from alignment at ACJE01000021.1:1543859..1544575+

>ASPNIDRAFT_55758-T1 ID=ASPNIDRAFT_55758-T1|Name=ASPNIDRAFT_55758-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=219bp|location=Sequence derived from alignment at ACJE01000021.1:1543859..1544575+ (Aspergillus niger ATCC 1015)
ATGGCGCCCCGCAAGCCTCGCTGCAACTTCAAGGAGTGCAAGGAAGCCGC
TCAACGCATCGTCGGAGACTGCAGCTTCTGCAGTGGTCACTACTGCTCTA
AGCATCGCATGTTGGAGGCTCATGCCTGCACTGGTCTCGAGGACTGCAAG
AAGGAGTCCCACGCCCGCAATGCCGATAAGCTCAACAGTGAGCGGACTCA
CGTCATTAAGGGCGTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55758ASPNIDRAFT_55758Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55758-T1.utr5p1ASPNIDRAFT_55758-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55758-T1.exon1ASPNIDRAFT_55758-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55758-T1.cdsASPNIDRAFT_55758-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55758-T1.utr3p1ASPNIDRAFT_55758-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55758-T1ASPNIDRAFT_55758-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035896
DBxrefInterPro:IPR000058
DBxrefPFAM:PF01428
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1543859..1544575 +
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