You are here

Home

ASPNIDRAFT_55959-T1, ASPNIDRAFT_55959-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55959-T1
Unique NameASPNIDRAFT_55959-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:746874..748509+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55959-T1 ID=ASPNIDRAFT_55959-T1|Name=ASPNIDRAFT_55959-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1636bp|location=Sequence derived from alignment at ACJE01000019.1:746874..748509+ (Aspergillus niger ATCC 1015)
CTTCAGAGAGCGATTTACACAGTCACCGAACAGTACAGGGTCATTGTGGA
TGGTGCAGAGTTTAGATAATTGAGCCTTATCGTTTGCGAATCGCAGTTGG
TGTCAGCCGTCATCTGGTTCCACTTCCGGTCGCTCCCATAGAGACGAACA
GCCTTCGCAGAACATCCTACTATCAACATCCTTCTCTCTCCTTCCACTCC
TTCTTTCCCTACCCCATTCCTCTCCTTAACCCTCTCTTCGCCCTCAGTTT
CCGTCAAGCATAGCCAGAATGCCTCTCGGAATTCACAATCCGTTACCTTC
ATCGTTAGGAAGTATGTTCCGCGCCGTTTTCGTTCCAATTTCCCCGCAAT
TCTCTTAAACAGGTGGTTCGGCTGCGACTAACAATCAGACAGGCGAATGT
AGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTT
TGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGTAA
TTAGCAAATTCAATACTGAGCCTGTTGCTCGAAAGTCGCACCGTCGCTCA
CGGTTTCTTCCCTAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATT
TTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTG
ATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTC
GGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGA
TGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTG
GAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCT
GGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGAC
CAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAAC
GTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAG
CTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGAC
CGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATA
TGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGG
GAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCAC
TGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTG
CGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGC
CGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTT
CAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTATGTATATT
CTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAG
CGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTA
CACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACA
TCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGG
CGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:746874..748509+

>ASPNIDRAFT_55959-T1 ID=ASPNIDRAFT_55959-T1|Name=ASPNIDRAFT_55959-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3654bp|location=Sequence derived from alignment at ACJE01000019.1:746874..748509+ (Aspergillus niger ATCC 1015)
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGCGAATG
TAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGT
TTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGGTAAATGCCTCTCGGAATTCACAATCCGTTACCTTC
ATCGTTAGGAAGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTG
TCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATT
TTGGCAGGAGCCAAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATT
TTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTG
ATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTC
GGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGA
TGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTG
GAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCT
GGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGAC
CAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAAC
GTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAG
CTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGAC
CGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATA
TGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGG
GAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCAC
TGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTG
CGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGC
CGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTT
CAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTATGTATATT
CTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAG
CGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTA
CACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACA
TCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGG
CGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGTAAATGCCTCTCGGAAT
TCACAATCCGTTACCTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCA
AAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAA
GTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGTCTCGCCGTTCTTAC
TGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCG
TCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCC
ACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTT
TGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCG
GGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGA
CGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGT
GTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGG
GAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGC
CGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGG
CGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATT
CCCGGAATGGTAGTGATATGTACAACGACATCCCCGTTTATGATGACAGC
CATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGG
AACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCC
GGGACCGGCCCCGCCGTGCGAATACATGGGCAGACGATATATATGATCGA
CCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCAC
CGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCG
ACGAGGACTATGTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCA
AAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGA
CCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGG
GTTTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAA
GAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAG
GTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55959ASPNIDRAFT_55959Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55959-T1.utr5p1ASPNIDRAFT_55959-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55959-T1.exon1ASPNIDRAFT_55959-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55959-T1.exon2ASPNIDRAFT_55959-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55959-T1.exon3ASPNIDRAFT_55959-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55959-T1.cdsASPNIDRAFT_55959-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55959-T1ASPNIDRAFT_55959-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR033643
DBxrefInterPro:IPR007461
DBxrefInterPro:IPR001452
DBxrefPFAM:PF04366
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:746874..748509 +
Powered by Drupal