You are here

Home

ASPNIDRAFT_56002-T1, ASPNIDRAFT_56002-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56002-T1
Unique NameASPNIDRAFT_56002-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1374110..1375281+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56002-T1 ID=ASPNIDRAFT_56002-T1|Name=ASPNIDRAFT_56002-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1172bp|location=Sequence derived from alignment at ACJE01000019.1:1374110..1375281+ (Aspergillus niger ATCC 1015)
CTGGCTTCTCATGAGCGCAGTAAATTATAACTAAGCGCTACAAAATGCCT
CGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCTCTCCAGTGAGAGA
AGCAACTGGCACAATGTCCCGCTTGTATCAGCGCTCGTACCCGGTCGTCG
ACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGATACTGGTACGTCTT
CAGACCTGCCTCTCGATTGGCTCATACACTAATTAGAATATTTCATGTAG
ATTCAGATATTTGCGACCCCCTTTCATCGCATGTTCTCCCTCGACAATAG
AAGTATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTTCCCGTTGGTGAGA
TGCTGCAACCTGCCCCGTCACCGTCGACTTTCCTTGTTGCTTACTTTCGA
TTCATAGTTTGGTCTATCATCTATGCTGGGGTCATTCCGTTCCTCGTCCT
CCTCGCCTGGGCAGCCATGTTCCGTCCATACCCTCACAAGGTCCAAGTGA
CCTTGCTGGGCTTCCTCATCGCGCTTATGCTAACGAGCCTTATCACCGAT
ATCATAAAGAACGCCGCTGGGCGACCTCGCCCTGATTTGATTTCTCGCTG
TTTACCAAGGAAGGGTACCCCCAAGGATTTGTTGGTTTCATGGACGGTGT
GCACTCAAACCAACGAGCACATCCTACAAGAGGGATGGAGGAGTTTTCCC
AGCGGCCACAGTAGCTTCTCATTTGGTGGACTCGGTTATATGTCATTGTA
AGCTTCAATGCCGCGAGAGCTCAGAGAAAGCACGCTGATTTTTTTCCAGA
TTCCTCTCCGGTCAAATGCACGTCTTCAGACCGAGGACCGACCTCTGTCG
CTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATTGCCATTT
CTCGTCTGGACGACTACCGCCACGATGTGTACGATGTTACTTGTGGATCG
CTGCTTGGGTTGACGGTAGCTTATTTCTCGTACCGACGATATTATCCGGC
CCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGAGACGATATCATCG
GCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAACTGCCG
GGCTCAGCATCTGTTGCGCGTCAATGGGATGCTCGGGAATCCTATCAACT
TGCGGAGTCTGCATCCTCTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:1374110..1375281+

>ASPNIDRAFT_56002-T1 ID=ASPNIDRAFT_56002-T1|Name=ASPNIDRAFT_56002-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3816bp|location=Sequence derived from alignment at ACJE01000019.1:1374110..1375281+ (Aspergillus niger ATCC 1015)
ATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCTCTCCAGT
GAGAGAAGCAACTGGCACAATGTCCCGCTTGTATCAGCGCTCGTACCCGG
TCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGATACTGATT
CAGATATTTGCGACCCCCTTTCATCGCATGTTCTCCCTCGACAATAGAAG
TATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTTCCCGTTGTTTGGTCTA
TCATCTATGCTGGGGTCATTCCGTTCCTCGTCCTCCTCGCCTGGGCAGCC
ATGTTCCGTCCATACCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCT
CATCGCGCTTATGCTAACGAGCCTTATCACCGATATCATAAAGAACGCCG
CTGGGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGT
ACCCCCAAGGATTTGTTGGTTTCATGGACGGTGTGCACTCAAACCAACGA
GCACATCCTACAAGAGGGATGGAGGAGTTTTCCCAGCGGCCACAGTAGCT
TCTCATTTGGTGGACTCGGTTATATGTCATTATTCCTCTCCGGTCAAATG
CACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCTTGTGGCTTTTGT
TCCGCTCCTCGGCGCTCTGTTAATTGCCATTTCTCGTCTGGACGACTACC
GCCACGATGTGTACGATGTTACTTGTGGATCGCTGCTTGGGTTGACGGTA
GCTTATTTCTCGTACCGACGATATTATCCGGCCCTTCGGTCAATCAAGTG
CGACTGCCCCTATGGCAGAGACGATATCATCGGCCCAGATGGATTCTCCA
AACTGCCTGGTGATGAGGAACAGCAACTGCCGGGCTCAGCATCTGTTGCG
CGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGAGTCTGCATCCTC
TTAAATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCTCTC
CAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTATCAGCGCTCGTAC
CCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGATACT
GATTCAGATATTTGCGACCCCCTTTCATCGCATGTTCTCCCTCGACAATA
GAAGTATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTTCCCGTTGTTTGG
TCTATCATCTATGCTGGGGTCATTCCGTTCCTCGTCCTCCTCGCCTGGGC
AGCCATGTTCCGTCCATACCCTCACAAGGTCCAAGTGACCTTGCTGGGCT
TCCTCATCGCGCTTATGCTAACGAGCCTTATCACCGATATCATAAAGAAC
GCCGCTGGGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAA
GGGTACCCCCAAGGATTTGTTGGTTTCATGGACGGTGTGCACTCAAACCA
ACGAGCACATCCTACAAGAGGGATGGAGGAGTTTTCCCAGCGGCCACAGT
AGCTTCTCATTTGGTGGACTCGGTTATATGTCATTATTCCTCTCCGGTCA
AATGCACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCTTGTGGCTT
TTGTTCCGCTCCTCGGCGCTCTGTTAATTGCCATTTCTCGTCTGGACGAC
TACCGCCACGATGTGTACGATGTTACTTGTGGATCGCTGCTTGGGTTGAC
GGTAGCTTATTTCTCGTACCGACGATATTATCCGGCCCTTCGGTCAATCA
AGTGCGACTGCCCCTATGGCAGAGACGATATCATCGGCCCAGATGGATTC
TCCAAACTGCCTGGTGATGAGGAACAGCAACTGCCGGGCTCAGCATCTGT
TGCGCGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGAGTCTGCAT
CCTCTTAAATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGC
TCTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTATCAGCGCTC
GTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGA
TACTGATTCAGATATTTGCGACCCCCTTTCATCGCATGTTCTCCCTCGAC
AATAGAAGTATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTTCCCGTTGT
TTGGTCTATCATCTATGCTGGGGTCATTCCGTTCCTCGTCCTCCTCGCCT
GGGCAGCCATGTTCCGTCCATACCCTCACAAGGTCCAAGTGACCTTGCTG
GGCTTCCTCATCGCGCTTATGCTAACGAGCCTTATCACCGATATCATAAA
GAACGCCGCTGGGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAA
GGAAGGGTACCCCCAAGGATTTGTTGGTTTCATGGACGGTGTGCACTCAA
ACCAACGAGCACATCCTACAAGAGGGATGGAGGAGTTTTCCCAGCGGCCA
CAGTAGCTTCTCATTTGGTGGACTCGGTTATATGTCATTATTCCTCTCCG
GTCAAATGCACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCTTGTG
GCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATTGCCATTTCTCGTCTGGA
CGACTACCGCCACGATGTGTACGATGTTACTTGTGGATCGCTGCTTGGGT
TGACGGTAGCTTATTTCTCGTACCGACGATATTATCCGGCCCTTCGGTCA
ATCAAGTGCGACTGCCCCTATGGCAGAGACGATATCATCGGCCCAGATGG
ATTCTCCAAACTGCCTGGTGATGAGGAACAGCAACTGCCGGGCTCAGCAT
CTGTTGCGCGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGAGTCT
GCATCCTCTTAAATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCC
CCGCTCTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTATCAGC
GCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCT
TGGATACTGATTCAGATATTTGCGACCCCCTTTCATCGCATGTTCTCCCT
CGACAATAGAAGTATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTTCCCG
TTGTTTGGTCTATCATCTATGCTGGGGTCATTCCGTTCCTCGTCCTCCTC
GCCTGGGCAGCCATGTTCCGTCCATACCCTCACAAGGTCCAAGTGACCTT
GCTGGGCTTCCTCATCGCGCTTATGCTAACGAGCCTTATCACCGATATCA
TAAAGAACGCCGCTGGGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTA
CCAAGGAAGGGTACCCCCAAGGATTTGTTGGTTTCATGGACGGTGTGCAC
TCAAACCAACGAGCACATCCTACAAGAGGGATGGAGGAGTTTTCCCAGCG
GCCACAGTAGCTTCTCATTTGGTGGACTCGGTTATATGTCATTATTCCTC
TCCGGTCAAATGCACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCT
TGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATTGCCATTTCTCGTC
TGGACGACTACCGCCACGATGTGTACGATGTTACTTGTGGATCGCTGCTT
GGGTTGACGGTAGCTTATTTCTCGTACCGACGATATTATCCGGCCCTTCG
GTCAATCAAGTGCGACTGCCCCTATGGCAGAGACGATATCATCGGCCCAG
ATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAACTGCCGGGCTCA
GCATCTGTTGCGCGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGA
GTCTGCATCCTCTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56002ASPNIDRAFT_56002Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56002-T1ASPNIDRAFT_56002-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56002-T1.utr5p1ASPNIDRAFT_56002-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56002-T1.exon1ASPNIDRAFT_56002-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56002-T1.exon2ASPNIDRAFT_56002-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56002-T1.exon3ASPNIDRAFT_56002-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56002-T1.exon4ASPNIDRAFT_56002-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56002-T1.cdsASPNIDRAFT_56002-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR036938
DBxrefInterPro:IPR000326
DBxrefPFAM:PF01569
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1374110..1375281 +
Powered by Drupal