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ASPNIDRAFT_56242-T1, ASPNIDRAFT_56242-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56242-T1
Unique NameASPNIDRAFT_56242-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:620263..622066-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56242-T1 ID=ASPNIDRAFT_56242-T1|Name=ASPNIDRAFT_56242-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1804bp|location=Sequence derived from alignment at ACJE01000009.1:620263..622066- (Aspergillus niger ATCC 1015)
CCAAAACCCACCGCCGTCCCCGCCCAGCCTCCCTTCCAAGTGGATATCCA
TCTGCTTCCACCGCTCAATTAGTTTCCCCGATATTCTTTCTTCGTTCCTT
CTCCTCCTTTTCCCTTTTCCTCCTCATCTATTGCTGTTGGCTGCTCCAGT
GCCGCACCGCCGTTCCACACCCCCCCGGTATCTCGGCCCTTTCTTCTTGC
CAACGACCCTCCCTACATTCCTGCTTCTTCACCCGACTTTCCGAGACAAG
CGATCGCAATGGCCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGA
CTCAAGGCTCTGGCTCAAACACTGCAGTATGTGTCGCATGTCCCGGAACT
GACAACTGGTACTGACGAGGTCTCTTCTTCTACTTAGATTTGCTTGGTTC
GCTGGGTAGGTTATAGCTCCGCCATGTTTCAGCCTGCCTGTTCTGTTTGA
CGACGTTTCATCATACAATGAAATCACTTGTCCTGGGCCTATCCAGCAGG
ACTTGCCCACTGGACCATCCCTCGCCAGCTCTCGCTTTGAACGGTCGGAC
CGAGCATATTCGCTAACGCACCATAGGCATGTGACGCTGCTCCTTTCGGT
CTTCCGCTATGTCCTGTCCTACATTACGTTCAACTACTACTCCTCGTCGG
CGCAGGTAGCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACATACGGA
ATTGTGGTCTACAAGGGACACATTGCCCGTGGCCGTCTCCAGGGCAGTGT
TCCCAACATTGCGCTGAAGCTGGCTGGTGATGAAAATGTCCAGTACCTCG
GTAAGTGATGGTGTGATCGAGTAGCGAAGACAACGATACTGATAAGCAGT
AACCAGGTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCC
CTGCTTCCTTTCAGCGTCTACTCCATCTTCCATGTTGCGACTTACACTCG
TGCCCACCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCG
GCTCTCCTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCC
TTGGCCGATACCATTGGACGGTTTGTCAAGCAGTACTATGACGCCAGCAT
GCACCTGGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGG
GCATCCTCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTG
GCCTTCTTCCGCGCCAGATACTCCCAGAGCTCCTTTGTCCAGCAGGCGGT
CCGCCACTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCAGAGCACCC
CCCCTGCGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAG
GCCTACGAGGCTACGGATCTCAACCGTATGAGCTCCGGTGCTGCGAAGAA
GCCCCAATAGAGGGCCATCAGGAGTGGTTCAGGACGTTCAGGATATACAA
CGGAATTGGTGAACTGCCCCGTGATCCTACGTGCATGATTGGGTTTTTGG
GAGCCGTTTTGTTCTGGACACCGATCATTGAGCCTGATGTGCAGGTAATG
AATCTCCACGGCCAGCGATATCATCCTGGCTGAGGAGCACGGCCCTTTGA
TGAACAATGAAGGTTGTTAATAGTGGAGGGGAGACGAAGCGAGACTTGGG
AGTAGCATCCGGGATGGTATTTCTAATTGCTCGTGGGGGGAGTACACGGG
AGGAAAGGTTACGTGAAATGTCTCAGCAAGTTTTTCTTTTCTGTCCTTGA
ATACGTCTCATTGTTATATATTCCAATGCGACAGTATAATGTTAGTGGCT
GTCG
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Coding sequence (CDS) from alignment at ACJE01000009.1:620263..622066-

>ASPNIDRAFT_56242-T1 ID=ASPNIDRAFT_56242-T1|Name=ASPNIDRAFT_56242-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3456bp|location=Sequence derived from alignment at ACJE01000009.1:620263..622066- (Aspergillus niger ATCC 1015)
GTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTT
CCTTTCAGCGTCTACTCCATCTTCCATGTTGCGACTTACACTCGTGCCCA
CCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCGGCTCTC
CTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCC
GATACCATTGGACGGTTTGTCAAGCAGTACTATGACGCCAGCATGCACCT
GGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGGGCATCC
TCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTC
TTCCGCGCCAGATACTCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCA
CTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCAGAGCACCCCCCCTG
CGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTAC
GAGGCTACGGATCTCAACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCA
ATAGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTAC
ATTACGTTCAACTACTACTCCTCGTCGGCGCAGGTAGCTTACCGCCTTGC
GTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGTCTACAAGGGACACA
TTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTG
GCTGGTGATGAAAATGTCCAGTACCTCGATTTGCTTGGTTCGCTGGATGG
CCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTG
GCTCAAACACTGCAGTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCC
CGTTGGCCCTGCTTCCTTTCAGCGTCTACTCCATCTTCCATGTTGCGACT
TACACTCGTGCCCACCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGC
TGCCCCCGGCTCTCCTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGAC
CTTCTCCCTTGGCCGATACCATTGGACGGTTTGTCAAGCAGTACTATGAC
GCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTT
GGCCGTGGGCATCCTCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCT
TCTACCTGGCCTTCTTCCGCGCCAGATACTCCCAGAGCTCCTTTGTCCAG
CAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCA
GAGCACCCCCCCTGCGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCG
TGGGCCAGGCCTACGAGGCTACGGATCTCAACCGTATGAGCTCCGGTGCT
GCGAAGAAGCCCCAATAGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCT
ATGTCCTGTCCTACATTACGTTCAACTACTACTCCTCGTCGGCGCAGGTA
GCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGT
CTACAAGGGACACATTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACA
TTGCGCTGAAGCTGGCTGGTGATGAAAATGTCCAGTACCTCGATTTGCTT
GGTTCGCTGGATGGCCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGA
GACTCAAGGCTCTGGCTCAAACACTGCAGTATGGCACTGGTCTGGCTCTA
CTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAGCGTCTACTCCATCT
TCCATGTTGCGACTTACACTCGTGCCCACCTGATTCCCACCATCCAGGGC
CCCGCTCCTGGTGCTGCCCCCGGCTCTCCTGCTTCTCCTAGCGGTCCCAA
GCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCATTGGACGGTTTGTCA
AGCAGTACTATGACGCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCT
CTTCTCCTCCGCTTGGCCGTGGGCATCCTCACCTTCTCCAAGGGTAGCTT
TGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGCCAGATACTCCCAGA
GCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCT
TCGGTTTCCCACCAGAGCACCCCCCCTGCGGTTCGCCAGGGATGGGAGTC
CTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTACGGATCTCAACCGTA
TGAGCTCCGGTGCTGCGAAGAAGCCCCAATAGGCATGTGACGCTGCTCCT
TTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTTCAACTACTACTCCT
CGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACA
TACGGAATTGTGGTCTACAAGGGACACATTGCCCGTGGCCGTCTCCAGGG
CAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGATGAAAATGTCCAGT
ACCTCGATTTGCTTGGTTCGCTGGATGGCCCCTGCTCCGCCCGCTAATCT
GCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAACACTGCAGTATGGCA
CTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAG
CGTCTACTCCATCTTCCATGTTGCGACTTACACTCGTGCCCACCTGATTC
CCACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCGGCTCTCCTGCTTCT
CCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCAT
TGGACGGTTTGTCAAGCAGTACTATGACGCCAGCATGCACCTGGTCGCTC
AGCTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGGGCATCCTCACCTTC
TCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGC
CAGATACTCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCG
CCAGAGTTGATGCTTCGGTTTCCCACCAGAGCACCCCCCCTGCGGTTCGC
CAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTAC
GGATCTCAACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCAATAGGCAT
GTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTT
CAACTACTACTCCTCGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTT
CCGCTGCCGCGACATACGGAATTGTGGTCTACAAGGGACACATTGCCCGT
GGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGA
TGAAAATGTCCAGTACCTCGATTTGCTTGGTTCGCTGGATGGCCCCTGCT
CCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAAC
ACTGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56242ASPNIDRAFT_56242Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56242-T1ASPNIDRAFT_56242-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56242-T1.cdsASPNIDRAFT_56242-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56242-T1.utr3p1ASPNIDRAFT_56242-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56242-T1.exon4ASPNIDRAFT_56242-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56242-T1.exon3ASPNIDRAFT_56242-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56242-T1.exon2ASPNIDRAFT_56242-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56242-T1.exon1ASPNIDRAFT_56242-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56242-T1.utr5p1ASPNIDRAFT_56242-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005344
DBxrefPFAM:PF03661
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:620263..622066 -
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