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ASPNIDRAFT_56338-T1, ASPNIDRAFT_56338-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56338-T1
Unique NameASPNIDRAFT_56338-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1099439..1101180+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56338-T1 ID=ASPNIDRAFT_56338-T1|Name=ASPNIDRAFT_56338-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1742bp|location=Sequence derived from alignment at ACJE01000008.1:1099439..1101180+ (Aspergillus niger ATCC 1015)
CCTTACTTTAACTTCTCTTTCTCGAGCTGGATTCAATCTGACCAGGCGTC
AGGCTCTCGTCACTCTTTCCACTTCAATTCATTGAATTTTCATTCTCTCT
CTTTATTTTCTAACTTCCTCTCCATCGTCGGTCAAAGACAATGAAGTATC
TCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTACGGCTTCCGCC
CATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTTCTGCGGATTG
GCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAGCCGACCAAGT
ACACCAGCACCTTTGACAATCTGACACCCAATGATAACGACTTCCGCTGT
AACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCGCTGAGGTCGC
CGCGGGCGATACCATCGGGATGAAGCTCTTCTACGACACCAGTATTGCGC
ATCCTGGTCCGGGTCAAGTTTGTATGAGTCACCCCCTCACCCCCTGTCAT
GGTAACTCATCTTCTAATCATCCTACTCTCCCGAACCGCAGATATGTCCA
AGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGACGGGGAATGGTTC
AAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCGACTTGACCAAGGA
CGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTCCAAATCCCTGCTG
AGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCATGTGGGCTTGCAC
GGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGGTGAGACAACCGCTC
CCAGATTTATGACATTCAAGGAGCAACAGTATTGATACCAAGATTCTAGC
TGTGCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTCCGAGTCTGAC
GTACAAAATCCCTGGTCTCTACAACGACAACATGACCCTGTTCAACGGCC
TCAATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGATATCCTGGAG
ACGCCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGGAAAGCTCGTC
TGCTGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGCCCGGGTACAA
CTACCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAGCAGCAGCACT
TCTTCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACTGGGGTCAATG
CGGAGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCGCCTTGCACCT
GTGTGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTCGTCTTGAGAG
GTCCACTCGCTCATTCGTGGAGACCTGCTGGGAGATGAGTGTGAGTGGAG
AGGAGATATTTCTGGGCTTAAAGGGCGTAGAATTTTGTCTTTCTATGTCA
AGAGCTGCCGCCCCGAGGGCCCGATAATACCTCCGATGTCAAGCAGCTCA
CTTATCTGTCCTGAAGCCTACAACGAGGTACCACAGCGAAGCTCGTTCCT
GTACAATTCGTTACATTTGTCAATCTTTTTATTCTTTGGTTCTTCATTGT
ATGAAGGTCTTCAGAAACGCTGTGTTGATTTCTTCGGATGCTTCCTGATC
CTCAATTTCTTGTTGAAGACCTAGGTCGCAGCTGATGTCTTGTTTCCACT
GAGACAGTTGTGTTAAAGCATTCCAAGAATCTGTATCAGTCATCTTCTTT
CGTGCCTGCTCAATGGTTGTGATTATATCTATCTTATTTATA
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Coding sequence (CDS) from alignment at ACJE01000008.1:1099439..1101180+

>ASPNIDRAFT_56338-T1 ID=ASPNIDRAFT_56338-T1|Name=ASPNIDRAFT_56338-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3069bp|location=Sequence derived from alignment at ACJE01000008.1:1099439..1101180+ (Aspergillus niger ATCC 1015)
ATGAAGTATCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTAC
GGCTTCCGCCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTT
CTGCGGATTGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAG
CCGACCAAGTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGA
CTTCCGCTGTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCG
CTGAGGTCGCCGCGGGCGATACCATCGGGATGAAGCTCTTCTACGACACC
AGTATTGCGCATCCTGGTCCGGGTCAAGTTTATATGTCCAAGGCACCCAC
CGGCAATGTCCAGGAATACGAAGGCGACGGGGAATGGTTCAAAATCTGGG
AAAAGACTCTTTGCAACGAGAATGCCGACTTGACCAAGGACGCCTGGTGC
ACCTGGGGCATGTCTCAATTCGAGTTCCAAATCCCTGCTGAGACCCCGGC
GGGCGAGTACCTGGTGCGCGCCGAGCATGTGGGCTTGCACGGCGCTCAGG
CCAACGAGGCTGAATTCTTCTACAGCTGTGCGCAAGTCAAGGTCACAGGC
TCGGGAACTGGATCTCCGAGTCTGACGTACAAAATCCCTGGTCTCTACAA
CGACAACATGACCCTGTTCAACGGCCTCAATCTGTGGGTCGACTCAGCCG
AGAAGATAGAGACGGATATCCTGGAGACGCCAATTGGTGATGATGTGTGG
AGTGGACATGGCTCGGAAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAG
TGCATCTGTCGCAAGCCCGGGTACAACTACCGCTGTTGCGCACGCCCATG
TTCAGACCCCTGCCAGCAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGC
AATCTTGTTTCGCACTGGGGTCAATGCGGAGGCCTCAATTATGCCGGCCC
AACCGAGTGTGAGTCGCCTTGCACCTGTGTGGAGCAGAACCCTTGGTACC
ATCAATGCGTGACTTCGTCTTGAATGAAGTATCTCCCTCTCGTCGTTGCA
GCCACTGCCAGCCTGGCACCTACGGCTTCCGCCCATTATATCTTCAGCAA
GCTCGTGCTGAACGGAGAGGCTTCTGCGGATTGGCAGTACATTCGTGAGA
CTACTCGCAGTGTAGTCTACGAGCCGACCAAGTACACCAGCACCTTTGAC
AATCTGACACCCAATGATAACGACTTCCGCTGTAACCTGGGCTCGTTCAG
CAATGCTGCCAAGACTGAGGTCGCTGAGGTCGCCGCGGGCGATACCATCG
GGATGAAGCTCTTCTACGACACCAGTATTGCGCATCCTGGTCCGGGTCAA
GTTTATATGTCCAAGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGA
CGGGGAATGGTTCAAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCG
ACTTGACCAAGGACGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTC
CAAATCCCTGCTGAGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCA
TGTGGGCTTGCACGGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGCT
GTGCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTCCGAGTCTGACG
TACAAAATCCCTGGTCTCTACAACGACAACATGACCCTGTTCAACGGCCT
CAATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGATATCCTGGAGA
CGCCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGGAAAGCTCGTCT
GCTGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGCCCGGGTACAAC
TACCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAGCAGCAGCACTT
CTTCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACTGGGGTCAATGC
GGAGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCGCCTTGCACCTG
TGTGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTCGTCTTGAATGA
AGTATCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTACGGCT
TCCGCCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTTCTGC
GGATTGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAGCCGA
CCAAGTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGACTTC
CGCTGTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCGCTGA
GGTCGCCGCGGGCGATACCATCGGGATGAAGCTCTTCTACGACACCAGTA
TTGCGCATCCTGGTCCGGGTCAAGTTTATATGTCCAAGGCACCCACCGGC
AATGTCCAGGAATACGAAGGCGACGGGGAATGGTTCAAAATCTGGGAAAA
GACTCTTTGCAACGAGAATGCCGACTTGACCAAGGACGCCTGGTGCACCT
GGGGCATGTCTCAATTCGAGTTCCAAATCCCTGCTGAGACCCCGGCGGGC
GAGTACCTGGTGCGCGCCGAGCATGTGGGCTTGCACGGCGCTCAGGCCAA
CGAGGCTGAATTCTTCTACAGCTGTGCGCAAGTCAAGGTCACAGGCTCGG
GAACTGGATCTCCGAGTCTGACGTACAAAATCCCTGGTCTCTACAACGAC
AACATGACCCTGTTCAACGGCCTCAATCTGTGGGTCGACTCAGCCGAGAA
GATAGAGACGGATATCCTGGAGACGCCAATTGGTGATGATGTGTGGAGTG
GACATGGCTCGGAAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAGTGCA
TCTGTCGCAAGCCCGGGTACAACTACCGCTGTTGCGCACGCCCATGTTCA
GACCCCTGCCAGCAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGCAATC
TTGTTTCGCACTGGGGTCAATGCGGAGGCCTCAATTATGCCGGCCCAACC
GAGTGTGAGTCGCCTTGCACCTGTGTGGAGCAGAACCCTTGGTACCATCA
ATGCGTGACTTCGTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56338ASPNIDRAFT_56338Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56338-T1ASPNIDRAFT_56338-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56338-T1.utr5p1ASPNIDRAFT_56338-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56338-T1.exon1ASPNIDRAFT_56338-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56338-T1.exon2ASPNIDRAFT_56338-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56338-T1.exon3ASPNIDRAFT_56338-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56338-T1.cdsASPNIDRAFT_56338-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56338-T1.utr3p1ASPNIDRAFT_56338-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Productendoglucanase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1099439..1101180 +
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