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ASPNIDRAFT_56476-T1, ASPNIDRAFT_56476-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56476-T1
Unique NameASPNIDRAFT_56476-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:508533..509524-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56476-T1 ID=ASPNIDRAFT_56476-T1|Name=ASPNIDRAFT_56476-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=992bp|location=Sequence derived from alignment at ACJE01000013.1:508533..509524- (Aspergillus niger ATCC 1015)
CACCAATTCAACTACACTATCCTCCTTATTTCTCCGTCCTTAAGTCCTCA
TACATATACTTTTAGACAGCCGATAATTTCCATCTAATCCAAAATGGCCA
ACGACCTCAAGGCCATCGTGGCCGAGCTCCACAGCGCCCTCGGCCGGCAA
CAATTCGAAGCCGTCAACGACCTCCTCAGTCGCGGCAAGCGCGCCCTCCT
CCTGCAGAATGTCCTGATTCCCACGCCGTCAGCACCCGCCGAGCTGGTCG
CCCAGGCCCGTGAGGTTCTTGAGCTCGGAGCCATCGCCTCCATCCGACAG
ACCGACGCACCCACCTTCACAAGATACTACCAGCAGCTGCAGCCGTTCTA
CGACCTGGAGCGGGACAGCACGAATGCCGGCCACGTCGACATCCGCAGTA
GCCAGCGCAGCAAGATCACAGGCTTGTATTTGCTGCTGCTCCTGAGCATG
GGCGACAGCACGAGCTTCCACACGGTGTTGGAGGGTCTGGTCGAGGAGGC
AAGTCTGAAGGACAAGAGCGTTGAGGATGATCCGTTCATCAAGTACCCCG
TTGAGCTGGAGAGGAACCTGATGGAGGGAAGCTACGATAAGGTGTGGCGG
GAGACGAACTCAGAGCGTGTGCCGTCGGAGGACTTTGCGCTGTTCTCGAA
TGTGAGTATACCCTGCCTGGTACTGTCTCGAGGTGGCGGGTAGCTAATGT
TATGATGATGCAGGTCCTGGTCGGAACCATCCGCAGCGAAATCGCAGACT
GCTCCGAAAAGGCGTACCCCTCGCTCCCCATCTCCAACGCCAAAAACCTC
CTCTTCCTCGATTCGGAGGGCGCCGTGATCGAGTTCGCCCAGCAGCGCGG
CTGGGTTCTCCGTGATGGCCGCATCTATTTCCCCGTCGAGCCCGAGGCGG
CTGCTCGGTCCGAGAAGGATATCCTCGTGGCCAGCGGTACAATTATCGAG
AATGCGATTGGCTATGCGCGCGAGCTGGAGACGATCGTTTGA
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Coding sequence (CDS) from alignment at ACJE01000013.1:508533..509524-

>ASPNIDRAFT_56476-T1 ID=ASPNIDRAFT_56476-T1|Name=ASPNIDRAFT_56476-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1674bp|location=Sequence derived from alignment at ACJE01000013.1:508533..509524- (Aspergillus niger ATCC 1015)
GTCCTGGTCGGAACCATCCGCAGCGAAATCGCAGACTGCTCCGAAAAGGC
GTACCCCTCGCTCCCCATCTCCAACGCCAAAAACCTCCTCTTCCTCGATT
CGGAGGGCGCCGTGATCGAGTTCGCCCAGCAGCGCGGCTGGGTTCTCCGT
GATGGCCGCATCTATTTCCCCGTCGAGCCCGAGGCGGCTGCTCGGTCCGA
GAAGGATATCCTCGTGGCCAGCGGTACAATTATCGAGAATGCGATTGGCT
ATGCGCGCGAGCTGGAGACGATCGTTTGAATGGCCAACGACCTCAAGGCC
ATCGTGGCCGAGCTCCACAGCGCCCTCGGCCGGCAACAATTCGAAGCCGT
CAACGACCTCCTCAGTCGCGGCAAGCGCGCCCTCCTCCTGCAGAATGTCC
TGATTCCCACGCCGTCAGCACCCGCCGAGCTGGTCGCCCAGGCCCGTGAG
GTTCTTGAGCTCGGAGCCATCGCCTCCATCCGACAGACCGACGCACCCAC
CTTCACAAGATACTACCAGCAGCTGCAGCCGTTCTACGACCTGGAGCGGG
ACAGCACGAATGCCGGCCACGTCGACATCCGCAGTAGCCAGCGCAGCAAG
ATCACAGGCTTGTATTTGCTGCTGCTCCTGAGCATGGGCGACAGCACGAG
CTTCCACACGGTGTTGGAGGGTCTGGTCGAGGAGGCAAGTCTGAAGGACA
AGAGCGTTGAGGATGATCCGTTCATCAAGTACCCCGTTGAGCTGGAGAGG
AACCTGATGGAGGGAAGCTACGATAAGGTGTGGCGGGAGACGAACTCAGA
GCGTGTGCCGTCGGAGGACTTTGCGCTGTTCTCGAATGTCCTGGTCGGAA
CCATCCGCAGCGAAATCGCAGACTGCTCCGAAAAGGCGTACCCCTCGCTC
CCCATCTCCAACGCCAAAAACCTCCTCTTCCTCGATTCGGAGGGCGCCGT
GATCGAGTTCGCCCAGCAGCGCGGCTGGGTTCTCCGTGATGGCCGCATCT
ATTTCCCCGTCGAGCCCGAGGCGGCTGCTCGGTCCGAGAAGGATATCCTC
GTGGCCAGCGGTACAATTATCGAGAATGCGATTGGCTATGCGCGCGAGCT
GGAGACGATCGTTTGAATGGCCAACGACCTCAAGGCCATCGTGGCCGAGC
TCCACAGCGCCCTCGGCCGGCAACAATTCGAAGCCGTCAACGACCTCCTC
AGTCGCGGCAAGCGCGCCCTCCTCCTGCAGAATGTCCTGATTCCCACGCC
GTCAGCACCCGCCGAGCTGGTCGCCCAGGCCCGTGAGGTTCTTGAGCTCG
GAGCCATCGCCTCCATCCGACAGACCGACGCACCCACCTTCACAAGATAC
TACCAGCAGCTGCAGCCGTTCTACGACCTGGAGCGGGACAGCACGAATGC
CGGCCACGTCGACATCCGCAGTAGCCAGCGCAGCAAGATCACAGGCTTGT
ATTTGCTGCTGCTCCTGAGCATGGGCGACAGCACGAGCTTCCACACGGTG
TTGGAGGGTCTGGTCGAGGAGGCAAGTCTGAAGGACAAGAGCGTTGAGGA
TGATCCGTTCATCAAGTACCCCGTTGAGCTGGAGAGGAACCTGATGGAGG
GAAGCTACGATAAGGTGTGGCGGGAGACGAACTCAGAGCGTGTGCCGTCG
GAGGACTTTGCGCTGTTCTCGAAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56476ASPNIDRAFT_56476Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56476-T1ASPNIDRAFT_56476-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56476-T1.cdsASPNIDRAFT_56476-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56476-T1.exon2ASPNIDRAFT_56476-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56476-T1.exon1ASPNIDRAFT_56476-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56476-T1.utr5p1ASPNIDRAFT_56476-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263XN3
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR033464
DBxrefPFAM:PF10075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:508533..509524 -
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