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ASPNIDRAFT_56669-T1, ASPNIDRAFT_56669-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56669-T1
Unique NameASPNIDRAFT_56669-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1307206..1309397-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56669-T1 ID=ASPNIDRAFT_56669-T1|Name=ASPNIDRAFT_56669-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2192bp|location=Sequence derived from alignment at ACJE01000006.1:1307206..1309397- (Aspergillus niger ATCC 1015)
AGATTTTCACCCCCGGTTTCTATCTTGACGACACCTACCCCGGCTCGACT
GCCTTGGGATAAGACGCGACAACAACAGAGTTTTCTCGAATACTTCCTTT
ATCAACACCATCCATCACCATGTCCCACGAAGAGGATCTCATCGACTACT
CCGACGAGGAGCTTCAGACCACTGACGCGGCGGCCACCACCGCTGCTCCC
GCCTCTAACGGAGAGGCTAAGAAGGGCGACTTGACGGTTTCTGGCGGCCG
TCCGGACAAGAAGGGTAGTTACGTCGGTATCCATTCGACCGGTTTCCGCG
ACTTTTTGCTCAAAGAGGAACTCCTACGTGCCATCACCGATTGCGGTTTC
GAACATCCATCGGAGGGTTAGTCTATCACGTATTCTTTCCCAAAGCTCCC
TCCATTGCTCCATGTTCCAACGTCCGTCCATCTCCGCGGGGAAAATCCAT
AGTCGTTTTGGGGCGCCCATCTCGCCTCAGCTTGCGGGTGGCATGAGGAT
GTCTGTTTCGCGTCATACATAAGACGAGTCGCCCTGCGGCAGTAGTGCAT
CTACAGCCTTTGCTTGTTTGCTTCACTTTACTCTGGTGAATTACGGCAAC
ACCATGCTCAGGGAATACCACAGATTGGTTTGTTCGCCTGCAGAGATTCT
GGATGAATCGTGGTTTGCTTCCGAAGAACACGGGTCGGACGCTTTTCCAC
CGTTCTCTGAATTGCAGCCGTCCTCCTGCCGCCTGCAGAAAGAGCTCTGA
ACAAGATGTCTTACTGCAGCTGACACAATTTTCGACTGTGTGCAAGTTCA
TTTGACTTTCGTTGTTTGGTGGAAGAAAATGTGGGACTATAATGCATCCC
TTCAGACTCAAAACCTCGGGGATGGACGGACGCTGCGACGCGAATTGCTT
TTTCTCTTTCTCAAAACTTATGGGTCGAGTACAAGTCTAACATACGGTTC
CGCCTCACTACAGTCCAGCAAGTCTGCATTCCTACCGCCATTCTGAACGT
CGATGTTCTCTGCCAGGCCAAGTCTGGTCTCGGAAAGACCGCGGTCTTCG
TTTTGACCACTCTGCACCAGCTGGAGCCGGTTCCTGGCGAGTGCTCTATC
CTTGTTATGTGCCACACCCGCGAGTTGGCATACCAGATCAAGAACGAGTA
CGCTCGTTTCAGCAAGTACCTTCCTGATGTCAAGACTGCTGTCTTCTACG
GAGGTACCCCTATTCAGAAGGACGTTGAATTGCTATCCAACAAGGAGTCC
TACCCCAACATTGTTGTTGGTACTCCTGGTCGTCTGAACGCCTTGGTCCG
TGACAAGAAGCTTTCTCTGCGCAACGTCAAGGCTTTCGTTCTCGACGAGT
GTGATAAGATGCTGGACCAGATCGGTGAGTTTATTTATGTGAGGTTATCT
TACGCCGTACTGATGATTCGTAATAGACATGCGTCGTGATGTCCAGGAGA
TCTTCCGTGCCACCCCTGCCGACAAGCAGGTTATGATGTTCAGTGCCACT
CTTTCTCAGGAGATCCGCCCCGTGTGCAAGAAGTTCATGAGGAACCCTCT
CGAGGTCTACGTCGATGACGACACGAAGCTCACGCTGCACGGTCTGCAGC
AATATTACATTAAGCTCAGCGAAGCGGAGAAGAACCGCAAGCTGAACGAG
CTCCTGGATAGCCTGGAGTTCAACCAGGTTATCATCTTCGTCAAGAGCAC
CCTGCGTGCGAATGAGCTCGACAAGCTGTTGCGCGAGTGCAACTTCCCCA
GTATTGCGGTGCACTCTGGTGTGAGCCAGGAGGAGCGGTAAGAGTACTTG
TTATTCATGTCTTTACTATGTACTAACGGTTGGTAGTATCAAACGCTACA
AGGAGTTCAAGGAATTCAACAAGCGTATCTGTGTTGCGACCGACGTGTTC
GGACGTGGTATCGATATTGAGCGTATCAACCTTGCCATCAACTACGACTT
GCCGGCTGATGCCGACTCCTACCTGCACCGTGTCGGTCGTGCGGGTCGTT
TCGGTACCAAGGGTCTGTCGATTTCTTTTGTCAGCACCGAGGATGACGAG
AAGGTGCTCAAGGACATCGAGAAGCGCTTCGAGGTTGCCCTTCCGTAAGT
ACAGACCGATGCTTATAACCATGCGGGCGAAGCTAATGAATACCAGTGAA
TACCCCGAGGGCGGCGTCGACTCGAGCACTTACATGGCCTAG
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Coding sequence (CDS) from alignment at ACJE01000006.1:1307206..1309397-

>ASPNIDRAFT_56669-T1 ID=ASPNIDRAFT_56669-T1|Name=ASPNIDRAFT_56669-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6675bp|location=Sequence derived from alignment at ACJE01000006.1:1307206..1309397- (Aspergillus niger ATCC 1015)
TGAATACCCCGAGGGCGGCGTCGACTCGAGCACTTACATGGCCTAGTATC
AAACGCTACAAGGAGTTCAAGGAATTCAACAAGCGTATCTGTGTTGCGAC
CGACGTGTTCGGACGTGGTATCGATATTGAGCGTATCAACCTTGCCATCA
ACTACGACTTGCCGGCTGATGCCGACTCCTACCTGCACCGTGTCGGTCGT
GCGGGTCGTTTCGGTACCAAGGGTCTGTCGATTTCTTTTGTCAGCACCGA
GGATGACGAGAAGGTGCTCAAGGACATCGAGAAGCGCTTCGAGGTTGCCC
TTCCGAGATCTTCCGTGCCACCCCTGCCGACAAGCAGGTTATGATGTTCA
GTGCCACTCTTTCTCAGGAGATCCGCCCCGTGTGCAAGAAGTTCATGAGG
AACCCTCTCGAGGTCTACGTCGATGACGACACGAAGCTCACGCTGCACGG
TCTGCAGCAATATTACATTAAGCTCAGCGAAGCGGAGAAGAACCGCAAGC
TGAACGAGCTCCTGGATAGCCTGGAGTTCAACCAGGTTATCATCTTCGTC
AAGAGCACCCTGCGTGCGAATGAGCTCGACAAGCTGTTGCGCGAGTGCAA
CTTCCCCAGTATTGCGGTGCACTCTGGTGTGAGCCAGGAGGAGCGTCCAG
CAAGTCTGCATTCCTACCGCCATTCTGAACGTCGATGTTCTCTGCCAGGC
CAAGTCTGGTCTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCTGCACC
AGCTGGAGCCGGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCCACACC
CGCGAGTTGGCATACCAGATCAAGAACGAGTACGCTCGTTTCAGCAAGTA
CCTTCCTGATGTCAAGACTGCTGTCTTCTACGGAGGTACCCCTATTCAGA
AGGACGTTGAATTGCTATCCAACAAGGAGTCCTACCCCAACATTGTTGTT
GGTACTCCTGGTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTTTCTCT
GCGCAACGTCAAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCTGGACC
AGATCGGTGAGTTTATTTATGTGAGGTTATCTTACGCCATGTCCCACGAA
GAGGATCTCATCGACTACTCCGACGAGGAGCTTCAGACCACTGACGCGGC
GGCCACCACCGCTGCTCCCGCCTCTAACGGAGAGGCTAAGAAGGGCGACT
TGACGGTTTCTGGCGGCCGTCCGGACAAGAAGGGTAGTTACGTCGGTATC
CATTCGACCGGTTTCCGCGACTTTTTGCTCAAAGAGGAACTCCTACGTGC
CATCACCGATTGCGGTTTCGAACATCCATCGGAGGTGAATACCCCGAGGG
CGGCGTCGACTCGAGCACTTACATGGCCTAGTATCAAACGCTACAAGGAG
TTCAAGGAATTCAACAAGCGTATCTGTGTTGCGACCGACGTGTTCGGACG
TGGTATCGATATTGAGCGTATCAACCTTGCCATCAACTACGACTTGCCGG
CTGATGCCGACTCCTACCTGCACCGTGTCGGTCGTGCGGGTCGTTTCGGT
ACCAAGGGTCTGTCGATTTCTTTTGTCAGCACCGAGGATGACGAGAAGGT
GCTCAAGGACATCGAGAAGCGCTTCGAGGTTGCCCTTCCGAGATCTTCCG
TGCCACCCCTGCCGACAAGCAGGTTATGATGTTCAGTGCCACTCTTTCTC
AGGAGATCCGCCCCGTGTGCAAGAAGTTCATGAGGAACCCTCTCGAGGTC
TACGTCGATGACGACACGAAGCTCACGCTGCACGGTCTGCAGCAATATTA
CATTAAGCTCAGCGAAGCGGAGAAGAACCGCAAGCTGAACGAGCTCCTGG
ATAGCCTGGAGTTCAACCAGGTTATCATCTTCGTCAAGAGCACCCTGCGT
GCGAATGAGCTCGACAAGCTGTTGCGCGAGTGCAACTTCCCCAGTATTGC
GGTGCACTCTGGTGTGAGCCAGGAGGAGCGTCCAGCAAGTCTGCATTCCT
ACCGCCATTCTGAACGTCGATGTTCTCTGCCAGGCCAAGTCTGGTCTCGG
AAAGACCGCGGTCTTCGTTTTGACCACTCTGCACCAGCTGGAGCCGGTTC
CTGGCGAGTGCTCTATCCTTGTTATGTGCCACACCCGCGAGTTGGCATAC
CAGATCAAGAACGAGTACGCTCGTTTCAGCAAGTACCTTCCTGATGTCAA
GACTGCTGTCTTCTACGGAGGTACCCCTATTCAGAAGGACGTTGAATTGC
TATCCAACAAGGAGTCCTACCCCAACATTGTTGTTGGTACTCCTGGTCGT
CTGAACGCCTTGGTCCGTGACAAGAAGCTTTCTCTGCGCAACGTCAAGGC
TTTCGTTCTCGACGAGTGTGATAAGATGCTGGACCAGATCGGTGAGTTTA
TTTATGTGAGGTTATCTTACGCCATGTCCCACGAAGAGGATCTCATCGAC
TACTCCGACGAGGAGCTTCAGACCACTGACGCGGCGGCCACCACCGCTGC
TCCCGCCTCTAACGGAGAGGCTAAGAAGGGCGACTTGACGGTTTCTGGCG
GCCGTCCGGACAAGAAGGGTAGTTACGTCGGTATCCATTCGACCGGTTTC
CGCGACTTTTTGCTCAAAGAGGAACTCCTACGTGCCATCACCGATTGCGG
TTTCGAACATCCATCGGAGGTGAATACCCCGAGGGCGGCGTCGACTCGAG
CACTTACATGGCCTAGTATCAAACGCTACAAGGAGTTCAAGGAATTCAAC
AAGCGTATCTGTGTTGCGACCGACGTGTTCGGACGTGGTATCGATATTGA
GCGTATCAACCTTGCCATCAACTACGACTTGCCGGCTGATGCCGACTCCT
ACCTGCACCGTGTCGGTCGTGCGGGTCGTTTCGGTACCAAGGGTCTGTCG
ATTTCTTTTGTCAGCACCGAGGATGACGAGAAGGTGCTCAAGGACATCGA
GAAGCGCTTCGAGGTTGCCCTTCCGAGATCTTCCGTGCCACCCCTGCCGA
CAAGCAGGTTATGATGTTCAGTGCCACTCTTTCTCAGGAGATCCGCCCCG
TGTGCAAGAAGTTCATGAGGAACCCTCTCGAGGTCTACGTCGATGACGAC
ACGAAGCTCACGCTGCACGGTCTGCAGCAATATTACATTAAGCTCAGCGA
AGCGGAGAAGAACCGCAAGCTGAACGAGCTCCTGGATAGCCTGGAGTTCA
ACCAGGTTATCATCTTCGTCAAGAGCACCCTGCGTGCGAATGAGCTCGAC
AAGCTGTTGCGCGAGTGCAACTTCCCCAGTATTGCGGTGCACTCTGGTGT
GAGCCAGGAGGAGCGTCCAGCAAGTCTGCATTCCTACCGCCATTCTGAAC
GTCGATGTTCTCTGCCAGGCCAAGTCTGGTCTCGGAAAGACCGCGGTCTT
CGTTTTGACCACTCTGCACCAGCTGGAGCCGGTTCCTGGCGAGTGCTCTA
TCCTTGTTATGTGCCACACCCGCGAGTTGGCATACCAGATCAAGAACGAG
TACGCTCGTTTCAGCAAGTACCTTCCTGATGTCAAGACTGCTGTCTTCTA
CGGAGGTACCCCTATTCAGAAGGACGTTGAATTGCTATCCAACAAGGAGT
CCTACCCCAACATTGTTGTTGGTACTCCTGGTCGTCTGAACGCCTTGGTC
CGTGACAAGAAGCTTTCTCTGCGCAACGTCAAGGCTTTCGTTCTCGACGA
GTGTGATAAGATGCTGGACCAGATCGGTGAGTTTATTTATGTGAGGTTAT
CTTACGCCATGTCCCACGAAGAGGATCTCATCGACTACTCCGACGAGGAG
CTTCAGACCACTGACGCGGCGGCCACCACCGCTGCTCCCGCCTCTAACGG
AGAGGCTAAGAAGGGCGACTTGACGGTTTCTGGCGGCCGTCCGGACAAGA
AGGGTAGTTACGTCGGTATCCATTCGACCGGTTTCCGCGACTTTTTGCTC
AAAGAGGAACTCCTACGTGCCATCACCGATTGCGGTTTCGAACATCCATC
GGAGGTGAATACCCCGAGGGCGGCGTCGACTCGAGCACTTACATGGCCTA
GTATCAAACGCTACAAGGAGTTCAAGGAATTCAACAAGCGTATCTGTGTT
GCGACCGACGTGTTCGGACGTGGTATCGATATTGAGCGTATCAACCTTGC
CATCAACTACGACTTGCCGGCTGATGCCGACTCCTACCTGCACCGTGTCG
GTCGTGCGGGTCGTTTCGGTACCAAGGGTCTGTCGATTTCTTTTGTCAGC
ACCGAGGATGACGAGAAGGTGCTCAAGGACATCGAGAAGCGCTTCGAGGT
TGCCCTTCCGAGATCTTCCGTGCCACCCCTGCCGACAAGCAGGTTATGAT
GTTCAGTGCCACTCTTTCTCAGGAGATCCGCCCCGTGTGCAAGAAGTTCA
TGAGGAACCCTCTCGAGGTCTACGTCGATGACGACACGAAGCTCACGCTG
CACGGTCTGCAGCAATATTACATTAAGCTCAGCGAAGCGGAGAAGAACCG
CAAGCTGAACGAGCTCCTGGATAGCCTGGAGTTCAACCAGGTTATCATCT
TCGTCAAGAGCACCCTGCGTGCGAATGAGCTCGACAAGCTGTTGCGCGAG
TGCAACTTCCCCAGTATTGCGGTGCACTCTGGTGTGAGCCAGGAGGAGCG
TCCAGCAAGTCTGCATTCCTACCGCCATTCTGAACGTCGATGTTCTCTGC
CAGGCCAAGTCTGGTCTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCT
GCACCAGCTGGAGCCGGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCC
ACACCCGCGAGTTGGCATACCAGATCAAGAACGAGTACGCTCGTTTCAGC
AAGTACCTTCCTGATGTCAAGACTGCTGTCTTCTACGGAGGTACCCCTAT
TCAGAAGGACGTTGAATTGCTATCCAACAAGGAGTCCTACCCCAACATTG
TTGTTGGTACTCCTGGTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTT
TCTCTGCGCAACGTCAAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCT
GGACCAGATCGGTGAGTTTATTTATGTGAGGTTATCTTACGCCATGTCCC
ACGAAGAGGATCTCATCGACTACTCCGACGAGGAGCTTCAGACCACTGAC
GCGGCGGCCACCACCGCTGCTCCCGCCTCTAACGGAGAGGCTAAGAAGGG
CGACTTGACGGTTTCTGGCGGCCGTCCGGACAAGAAGGGTAGTTACGTCG
GTATCCATTCGACCGGTTTCCGCGACTTTTTGCTCAAAGAGGAACTCCTA
CGTGCCATCACCGATTGCGGTTTCGAACATCCATCGGAGGTGAATACCCC
GAGGGCGGCGTCGACTCGAGCACTTACATGGCCTAGTATCAAACGCTACA
AGGAGTTCAAGGAATTCAACAAGCGTATCTGTGTTGCGACCGACGTGTTC
GGACGTGGTATCGATATTGAGCGTATCAACCTTGCCATCAACTACGACTT
GCCGGCTGATGCCGACTCCTACCTGCACCGTGTCGGTCGTGCGGGTCGTT
TCGGTACCAAGGGTCTGTCGATTTCTTTTGTCAGCACCGAGGATGACGAG
AAGGTGCTCAAGGACATCGAGAAGCGCTTCGAGGTTGCCCTTCCGAGATC
TTCCGTGCCACCCCTGCCGACAAGCAGGTTATGATGTTCAGTGCCACTCT
TTCTCAGGAGATCCGCCCCGTGTGCAAGAAGTTCATGAGGAACCCTCTCG
AGGTCTACGTCGATGACGACACGAAGCTCACGCTGCACGGTCTGCAGCAA
TATTACATTAAGCTCAGCGAAGCGGAGAAGAACCGCAAGCTGAACGAGCT
CCTGGATAGCCTGGAGTTCAACCAGGTTATCATCTTCGTCAAGAGCACCC
TGCGTGCGAATGAGCTCGACAAGCTGTTGCGCGAGTGCAACTTCCCCAGT
ATTGCGGTGCACTCTGGTGTGAGCCAGGAGGAGCGTCCAGCAAGTCTGCA
TTCCTACCGCCATTCTGAACGTCGATGTTCTCTGCCAGGCCAAGTCTGGT
CTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCTGCACCAGCTGGAGCC
GGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCCACACCCGCGAGTTGG
CATACCAGATCAAGAACGAGTACGCTCGTTTCAGCAAGTACCTTCCTGAT
GTCAAGACTGCTGTCTTCTACGGAGGTACCCCTATTCAGAAGGACGTTGA
ATTGCTATCCAACAAGGAGTCCTACCCCAACATTGTTGTTGGTACTCCTG
GTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTTTCTCTGCGCAACGTC
AAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCTGGACCAGATCGGTGA
GTTTATTTATGTGAGGTTATCTTACGCCATGTCCCACGAAGAGGATCTCA
TCGACTACTCCGACGAGGAGCTTCAGACCACTGACGCGGCGGCCACCACC
GCTGCTCCCGCCTCTAACGGAGAGGCTAAGAAGGGCGACTTGACGGTTTC
TGGCGGCCGTCCGGACAAGAAGGGTAGTTACGTCGGTATCCATTCGACCG
GTTTCCGCGACTTTTTGCTCAAAGAGGAACTCCTACGTGCCATCACCGAT
TGCGGTTTCGAACATCCATCGGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUB2ASPNIDRAFT_56669Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56669-T1ASPNIDRAFT_56669-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56669-T1.cdsASPNIDRAFT_56669-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56669-T1.exon5ASPNIDRAFT_56669-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56669-T1.exon4ASPNIDRAFT_56669-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56669-T1.exon3ASPNIDRAFT_56669-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56669-T1.exon2ASPNIDRAFT_56669-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56669-T1.exon1ASPNIDRAFT_56669-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56669-T1.utr5p1ASPNIDRAFT_56669-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262E4Q
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductSuppressor of the cold-sensitive snRNP bioproteinsis mutant brr1-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1307206..1309397 -
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